Gene: AT3G53120
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G53120
- Transcript Identifier AT3G53120.1
- Gene Type Coding gene
- Location Chr3 : 19690729-19692490 : negative
Gene Family Information
- ID HOM05D003364
- #Genes/#Species 204/94
- Phylogenetic origin
- ID ORTHO05D003795
- #Genes/#Species 205/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G53120.1
- symbol VPS37-1
- uniprot Q9SCP9
Descriptions
- Description Modifier of rudimentary (Mod(r)) protein
- Computational description VPS37-1; CONTAINS InterPro DOMAIN/s: Modifier of rudimentary, Modr (InterPro:IPR009851); BEST Arabidopsis thaliana protein match is: Modifier of rudimentary (Mod(r)) protein (TAIR:AT2G36680.1); Has 448 Blast hits to 448 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 285; Fungi - 19; Plants - 79; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006623 | IBA | Gene Ontology | protein targeting to vacuole | 1 |
| GO:0006612 | IBA | Gene Ontology | protein targeting to membrane | 1 |
| GO:0043162 | IBA | Gene Ontology | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | 1 |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0000813 | ISS, IBA | Gene Ontology | ESCRT I complex | 1 3 |
| GO:0005768 | IEA | GOA Database | endosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.4.1.1.3 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-I complex.component VPS37 |