Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p63820 Brassica napus
A07p22450 Brassica napus
A09p48130 Brassica napus
A09p48140 Brassica napus
Aa31LG10G10040 Aethionema arabicum
Actinidia02995 Actinidia chinensis
Actinidia09149 Actinidia chinensis
Actinidia25848 Actinidia chinensis
Actinidia38220 Actinidia chinensis
Actinidia38221 Actinidia chinensis
Ah.06g183020 Amaranthus hybridus
AL2G16350 Arabidopsis lyrata
AL5G36240 Arabidopsis lyrata
AL8G45310 Arabidopsis lyrata
Aqoxy2G01950 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2GDU51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.425ZXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6JHV2K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9C11CW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9IBE58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGAM8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5CKGN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJ3PHW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TY7N4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJQ7J1 Arachis hypogaea
AT3G55120 Arabidopsis thaliana
AT5G66220 Arabidopsis thaliana
ATR0759G079 Amborella trichopoda
ATR0759G123 Amborella trichopoda
ATR0759G124 Amborella trichopoda
Atru.chr12.582 Acer truncatum
AUR62015655 Chenopodium quinoa
AUR62015656 Chenopodium quinoa
AUR62020547 Chenopodium quinoa
AUR62027261 Chenopodium quinoa
BcaB01g00125 Brassica carinata
BcaB02g07695 Brassica carinata
BcaB05g22784 Brassica carinata
BcaB05g22785 Brassica carinata
BcaC07g39836 Brassica carinata
BcaC07g39837 Brassica carinata
BcaC08g44726 Brassica carinata
BcaNung04348 Brassica carinata
BolC6t37453H Brassica oleracea
BolC7t46557H Brassica oleracea
BolC8t50659H Brassica oleracea
BolC8t50661H Brassica oleracea
BraA03t15453Z Brassica rapa
BraA07t29921Z Brassica rapa
BraA09t40267Z Brassica rapa
BraA09t40269Z Brassica rapa
C06p22640 Brassica napus
C07p61310 Brassica napus
C08p30380 Brassica napus
C08p30390 Brassica napus
CAN.G184.19 Capsicum annuum
CANSAT21G2171 Cannabis sativa
CARHR165140 Cardamine hirsuta
CARHR165150 Cardamine hirsuta
CARHR281510 Cardamine hirsuta
Carub.0005s2175 Capsella rubella
Carub.0008s2828 Capsella rubella
Ca_11318_v3 Cicer arietinum L.
Cc02_g08570 Coffea canephora
Cc03_g07660 Coffea canephora
Cc03_g07670 Coffea canephora
CDE04G2587 Ceratophyllum demersum
CDE07G1335 Ceratophyllum demersum
Cfa001554 Carpinus fangiana
Ciclev10032697m.g Citrus clementina
CiPaw.01G280400 Carya illinoinensis
ClCG09G020280 Citrullus lanatus
COL.COLO4_10881 Corchorus olitorius
Cpa.g.sc1855.1 Carica papaya
CsaV3_5G026140 Cucumis sativus L.
CSS0010290 Camellia sinensis var. sinensis
CSS0023458 Camellia sinensis var. sinensis
CSS0028549 Camellia sinensis var. sinensis
CSS0034202 Camellia sinensis var. sinensis
CSS0050436 Camellia sinensis var. sinensis
DCAR_027694 Daucus carota
Dinv31395 Davidia involucrata
Duzib114G0926 Durio zibethinus
ECA232G4190 Erigeron canadensis
EL10Ac2g03488 Beta vulgaris
EL10Ac2g03495 Beta vulgaris
Eucgr.F03816 Eucalyptus grandis
Eucgr.J01152 Eucalyptus grandis
Eucgr.J01153 Eucalyptus grandis
FAN03G1303 Fragaria x ananassa
FAN06G2019 Fragaria x ananassa
FAN10G3261 Fragaria x ananassa
FvH4_7g20870 Fragaria vesca
Glyma.10G292200 Glycine max
Glyma.20G241500 Glycine max
Glyma.20G241600 Glycine max
Glyma.20G241700 Glycine max
Gohir.A13G020400 Gossypium hirsutum
Gohir.D13G021000 Gossypium hirsutum
Gorai.013G023400 Gossypium raimondii
GSVIVG01032619001 Vitis vinifera
HanXRQChr15g0496871 Helianthus annuus
HanXRQChr15g0496881 Helianthus annuus
HanXRQChr15g0496901 Helianthus annuus
Hma1.2p1_0629F.1_g192100 Hydrangea macrophylla
HPP92_021163 Vanilla planifolia
Hund19984 Selenicereus undatus
Lalb_Chr02g0143921 Lupinus albus
Lalb_Chr06g0164121 Lupinus albus
Lj1A930T84 Lonicera japonica
Lj5g0004759 Lotus japonicus
Lj5g0007558 Lotus japonicus
Lj5g0014981 Lotus japonicus
Lj5g0021768 Lotus japonicus
Lsat_1_v5_gn_2_76781 Lactuca sativa
Lsat_1_v5_gn_9_66221 Lactuca sativa
Manes.07G107200 Manihot esculenta
Mapoly0167s0012 Marchantia polymorpha
MBI14_g16292_MAGBIO Magnolia biondii
MBI14_g22903_MAGBIO Magnolia biondii
MD01G1117800 Malus domestica
MD01G1118000 Malus domestica
MD01G1118100 Malus domestica
MD01G1118300 Malus domestica
MD07G1186300 Malus domestica
MD07G1186400 Malus domestica
Medtr1g115820 Medicago truncatula
Medtr1g115830 Medicago truncatula
Medtr1g115840 Medicago truncatula
Medtr1g115850 Medicago truncatula
Medtr1g115870 Medicago truncatula
Medtr1g115890 Medicago truncatula
Medtr7g027135 Medicago truncatula
MELO3C025484.2 Cucumis melo
Migut.D00159 Erythranthe guttata
MSTRG.21607 Avicennia marina
Nitab4.5_0000027g0470 Nicotiana tabacum
Nitab4.5_0005313g0010 Nicotiana tabacum
Nn2g10542 Nelumbo nucifera
Nn2g12834 Nelumbo nucifera
Nn2g12996 Nelumbo nucifera
Oeu057578.1 Olea europaea
Os03g0819600 Oryza sativa ssp. japonica
Peaxi162Scf00006g00088 Petunia axillaris
Peaxi162Scf00038g01957 Petunia axillaris
PGR044G1348 Punica granatum
PGR044G1755 Punica granatum
PGR142G2050 Punica granatum
Phvul.002G276500 Phaseolus vulgaris
Phvul.003G216600 Phaseolus vulgaris
Phvul.007G008500 Phaseolus vulgaris
Phvul.007G008600 Phaseolus vulgaris
Potri.010G213000 Populus trichocarpa
Prupe.2G225200 Prunus persica
Psat6g237840 Pisum sativum
Psat6g237920 Pisum sativum
Psat6g238360 Pisum sativum
PSO339G0073 Papaver somniferum
PSO384G0434 Papaver somniferum
PSO384G4896 Papaver somniferum
PSO407G0338 Papaver somniferum
PSO699G0055 Papaver somniferum
QL08p057674 Quercus lobata
RcHm_v2.0_Chr1g0365111 Rosa chinensis
RcHm_v2.0_Chr7g0221421 Rosa chinensis
RcHm_v2.0_Chr7g0221431 Rosa chinensis
Rhsim01G0013100 Rhododendron simsii
Rhsim03G0098600 Rhododendron simsii
Rhsim03G0120200 Rhododendron simsii
Sabra10G0164900 Salix brachista
SalBow1G4850 Salvia bowleyana
SalBow3G2785 Salvia bowleyana
SalBow3G3107 Salvia bowleyana
Sc06g0001890 Simmondsia chinensis
Sc06g0001900 Simmondsia chinensis
Sed0018943 Sechium edule
SEGI_22659 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01424 Striga asiatica
SMO172G0159 Selaginella moellendorffii
Solyc05g010310.3 Solanum lycopersicum
Solyc05g010320.4 Solanum lycopersicum
Sopen05g006080 Solanum pennellii
Sopen05g006090 Solanum pennellii
Sp2g30475 Schrenkiella parvula
Sp5g07300 Schrenkiella parvula
TAR623G0942 Trochodendron aralioides
THA.LOC104825165 Tarenaya hassleriana
Thecc.10G060600 Theobroma cacao
Thecc.10G060800 Theobroma cacao
Thecc.10G061200 Theobroma cacao
Thhalv10004922m.g Eutrema salsugineum
Thhalv10010658m.g Eutrema salsugineum
TPR.G10384 Trifolium pratense
TPR.G10424 Trifolium pratense
TPR.G30359 Trifolium pratense
TPR.G30361 Trifolium pratense
TWI38G1411 Tripterygium wilfordii
unitig_0.g651 Utricularia gibba
vmacro00636 Vaccinium macrocarpon
vmacro07205 Vaccinium macrocarpon
VMungo0720G0350 Vigna mungo
VMungo0720G1901 Vigna mungo
VMungo0720G3152 Vigna mungo
Zm00001eb062510 Zea mays

User provided reference genes

Program Settings