Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04980 Brassica napus
A04p00330 Brassica napus
A08p31850 Brassica napus
A08p31860 Brassica napus
A09p13990 Brassica napus
A09p54880 Brassica napus
Aa31LG10G16880 Aethionema arabicum
Aa31LG1G29500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2570 Anthoceros agrestis
Actinidia00727 Actinidia chinensis
Actinidia21092 Actinidia chinensis
Actinidia24873 Actinidia chinensis
Ah.08g212910 Amaranthus hybridus
AL1G26420 Arabidopsis lyrata
AL1G26440 Arabidopsis lyrata
AL1G26480 Arabidopsis lyrata
AL1G26690 Arabidopsis lyrata
AL2G11230 Arabidopsis lyrata
AL5G45870 Arabidopsis lyrata
Aqoxy2G03211 Aquilegia oxysepala
Aqoxy4G02508 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KX9J6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9ZP1U Arachis hypogaea
AT1G14688 Arabidopsis thaliana
AT1G59560 Arabidopsis thaliana
AT1G63900 Arabidopsis thaliana
ATR0626G053 Amborella trichopoda
Atru.chr5.1347 Acer truncatum
Atru.chr5.1348 Acer truncatum
Atru.chr9.1958 Acer truncatum
AUR62033697 Chenopodium quinoa
AUR62036783 Chenopodium quinoa
BcaB01g06302 Brassica carinata
BcaB03g13087 Brassica carinata
BcaB07g31539 Brassica carinata
BcaC02g10340 Brassica carinata
BcaC04g22672 Brassica carinata
BcaC07g38753 Brassica carinata
BcaC07g38754 Brassica carinata
BcaC07g42712 Brassica carinata
BcaC07g42715 Brassica carinata
BolC3t13079H Brassica oleracea
BolC3t13084H Brassica oleracea
BolC4t24547H Brassica oleracea
BolC8t49305H Brassica oleracea
BolC8t49308H Brassica oleracea
BolC8t49309H Brassica oleracea
BolC8t49311H Brassica oleracea
BolC8t51358H Brassica oleracea
BolC9t54582H Brassica oleracea
BraA03t09834Z Brassica rapa
BraA04t15751Z Brassica rapa
BraA09t37046Z Brassica rapa
C03p05670 Brassica napus
C03p05710 Brassica napus
C04p30150 Brassica napus
C08p16840 Brassica napus
C08p16850 Brassica napus
C09p16810 Brassica napus
CAN.G1682.13 Capsicum annuum
CAN.G1682.14 Capsicum annuum
CANSAT25G0133 Cannabis sativa
CARHR014980 Cardamine hirsuta
CARHR047070 Cardamine hirsuta
CARHR173350 Cardamine hirsuta
Carub.0001s1424 Capsella rubella
Carub.0001s1426 Capsella rubella
Carub.0001s1427 Capsella rubella
Carub.0002s0094 Capsella rubella
Carub.0002s0588 Capsella rubella
Carub.0005s1267 Capsella rubella
Carub.0005s2970 Capsella rubella
Ca_10402_v3 Cicer arietinum L.
Cc01_g19840 Coffea canephora
Cc09_g01880 Coffea canephora
CDE05G1806 Ceratophyllum demersum
CDE07G0407 Ceratophyllum demersum
Cfa006095 Carpinus fangiana
Cfa025546 Carpinus fangiana
Ciclev10020955m.g Citrus clementina
Ciclev10020957m.g Citrus clementina
CiPaw.07G095400 Carya illinoinensis
ClCG09G006810 Citrullus lanatus
COL.COLO4_04410 Corchorus olitorius
COL.COLO4_28866 Corchorus olitorius
Cpa.g.sc9.121 Carica papaya
Cre03.g169050 Chlamydomonas reinhardtii
CsaV3_7G028540 Cucumis sativus L.
CSS0003095 Camellia sinensis var. sinensis
CSS0018318 Camellia sinensis var. sinensis
CSS0028362 Camellia sinensis var. sinensis
DCAR_012453 Daucus carota
Dinv11261 Davidia involucrata
Duzib138G0559 Durio zibethinus
Duzib211G0202 Durio zibethinus
ECA247G2569 Erigeron canadensis
EL10Ac7g17196 Beta vulgaris
Eucgr.H01525 Eucalyptus grandis
Eucgr.H01526 Eucalyptus grandis
FAN15G0418 Fragaria x ananassa
FAN20G3017 Fragaria x ananassa
FAN24G0501 Fragaria x ananassa
FAN27G2094 Fragaria x ananassa
FvH4_2g24080 Fragaria vesca
Glyma.02G149800 Glycine max
Glyma.10G024100 Glycine max
Gohir.A08G044700 Gossypium hirsutum
Gohir.A11G120000 Gossypium hirsutum
Gohir.D08G054400 Gossypium hirsutum
Gohir.D11G124766 Gossypium hirsutum
Gorai.004G054800 Gossypium raimondii
Gorai.007G133700 Gossypium raimondii
GSVIVG01011070001 Vitis vinifera
HanXRQChr10g0282971 Helianthus annuus
Haze_04760 Corylus avellana
Hma1.2p1_0257F.1_g103860 Hydrangea macrophylla
HPP92_000042 Vanilla planifolia
HPP92_026952 Vanilla planifolia
Hund05356 Selenicereus undatus
Lalb_Chr06g0163131 Lupinus albus
Lj1C44G0 Lonicera japonica
Lj2C1179T8 Lonicera japonica
Lj5g0011221 Lotus japonicus
Lsat_1_v5_gn_8_134981 Lactuca sativa
Lsat_1_v5_gn_9_4540 Lactuca sativa
Manes.05G072700 Manihot esculenta
Mapoly0009s0167 Marchantia polymorpha
MBI17_g17897_MAGBIO Magnolia biondii
MCO02G025 Micromonas commoda
MD03G1270200 Malus domestica
MD11G1291000 Malus domestica
MD11G1291200 Malus domestica
Medtr1g089900 Medicago truncatula
Medtr1g089910 Medicago truncatula
Medtr1g089920 Medicago truncatula
Medtr1g089940 Medicago truncatula
Medtr1g089960 Medicago truncatula
Medtr3g103470 Medicago truncatula
Medtr7g094290 Medicago truncatula
MELO3C015867.2 Cucumis melo
MELO3C029935.2 Cucumis melo
Migut.D00256 Erythranthe guttata
Migut.N02146 Erythranthe guttata
Migut.N02147 Erythranthe guttata
Migut.N02149 Erythranthe guttata
Migut.N02166 Erythranthe guttata
MSTRG.21581 Avicennia marina
Nitab4.5_0002093g0030 Nicotiana tabacum
Nitab4.5_0007767g0030 Nicotiana tabacum
Nn1g02094 Nelumbo nucifera
Nn4g26144 Nelumbo nucifera
Oeu001439.1 Olea europaea
Os07g0647800 Oryza sativa ssp. japonica
Peaxi162Scf00783g00337 Petunia axillaris
PGSC0003DMG402020120 Solanum tuberosum
Phvul.007G169100 Phaseolus vulgaris
Potri.014G138000 Populus trichocarpa
Pp3c19_9460 Physcomitrium patens
Pp3c22_7850 Physcomitrium patens
Prupe.8G246200 Prunus persica
Prupe.8G246300 Prunus persica
Prupe.8G246600 Prunus persica
Prupe.8G246900 Prunus persica
Psat6g168880 Pisum sativum
Psat6g168920 Pisum sativum
PSO170G4489 Papaver somniferum
PSO407G0137 Papaver somniferum
PSO566G0024 Papaver somniferum
QL12p022545 Quercus lobata
RcHm_v2.0_Chr6g0291861 Rosa chinensis
Rhsim01G0276900 Rhododendron simsii
Rhsim13G0021900 Rhododendron simsii
Rhsim13G0022000 Rhododendron simsii
Sabra14G0104100 Salix brachista
SalBow4G3039 Salvia bowleyana
Sc17g0003900 Simmondsia chinensis
Sed0022837 Sechium edule
Sed0023278 Sechium edule
SEGI_02468 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00442 Striga asiatica
SMO116G0196 Selaginella moellendorffii
Solyc06g084360.4 Solanum lycopersicum
Sopen06g035750 Solanum pennellii
Sp2g00790 Schrenkiella parvula
Sp5g00470 Schrenkiella parvula
TAR362G0768 Trochodendron aralioides
TAR633G1108 Trochodendron aralioides
THA.LOC104820691 Tarenaya hassleriana
THA.LOC104823098 Tarenaya hassleriana
Thecc.01G284800 Theobroma cacao
Thhalv10008106m.g Eutrema salsugineum
Thhalv10024073m.g Eutrema salsugineum
TPR.G13299 Trifolium pratense
TPR.G13400 Trifolium pratense
TPR.G13403 Trifolium pratense
TPR.G32824 Trifolium pratense
TPR.G36026 Trifolium pratense
TWI23G0223 Tripterygium wilfordii
unitig_0.g80 Utricularia gibba
vmacro02543 Vaccinium macrocarpon
vmacro14942 Vaccinium macrocarpon
VMungo0720G0236 Vigna mungo
Zm00001eb110530 Zea mays
Zm00001eb329440 Zea mays

User provided reference genes

Program Settings