Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33970 Brassica napus
A06p41820 Brassica napus
Aa31LG2G5880 Aethionema arabicum
Aa31LG4G13590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1232 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4383 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5567 Anthoceros agrestis
Actinidia03538 Actinidia chinensis
Actinidia03541 Actinidia chinensis
Actinidia19543 Actinidia chinensis
Actinidia37710 Actinidia chinensis
Ah.03g136540 Amaranthus hybridus
Ah.13g073060 Amaranthus hybridus
AL4G44880 Arabidopsis lyrata
AL5G15520 Arabidopsis lyrata
Aqoxy3G01438 Aquilegia oxysepala
Aqoxy5G03003 Aquilegia oxysepala
Aqoxy7G01010 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8K54LH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DY4V9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PY163H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7XXA2 Arachis hypogaea
AT2G45700 Arabidopsis thaliana
AT3G26680 Arabidopsis thaliana
ATR0582G374 Amborella trichopoda
ATR0681G114 Amborella trichopoda
ATR1132G134 Amborella trichopoda
Atru.chr6.2723 Acer truncatum
Atru.chr7.1818 Acer truncatum
AUR62002374 Chenopodium quinoa
AUR62017469 Chenopodium quinoa
AUR62023805 Chenopodium quinoa
AUR62042869 Chenopodium quinoa
BcaB06g29430 Brassica carinata
BcaC02g07076 Brassica carinata
BcaC06g31050 Brassica carinata
BolC4t28676H Brassica oleracea
BolC7t44091H Brassica oleracea
BraA04t18858Z Brassica rapa
BraA06t27101Z Brassica rapa
C04p71770 Brassica napus
C07p35700 Brassica napus
C08p19060 Brassica napus
CAN.G348.12 Capsicum annuum
CAN.G473.164 Capsicum annuum
CARHR140930 Cardamine hirsuta
CARHR147690 Cardamine hirsuta
Carub.0004s2836 Capsella rubella
Carub.0005s0468 Capsella rubella
Ca_08231_v3 Cicer arietinum L.
Ca_15803_v3 Cicer arietinum L.
CBR_g23533 Chara braunii
Cc08_g07770 Coffea canephora
CDE05G0719 Ceratophyllum demersum
CDE09G0952 Ceratophyllum demersum
CDE11G1185 Ceratophyllum demersum
Cfa007140 Carpinus fangiana
Cfa024079 Carpinus fangiana
Ciclev10007634m.g Citrus clementina
Ciclev10015161m.g Citrus clementina
CiPaw.15G094000 Carya illinoinensis
ClCG05G015900 Citrullus lanatus
COL.COLO4_13399 Corchorus olitorius
COL.COLO4_21164 Corchorus olitorius
COL.COLO4_32907 Corchorus olitorius
Cpa.g.sc266.3 Carica papaya
Cpa.g.sc266.4 Carica papaya
Cpa.g.sc70.40 Carica papaya
Cre09.g399907 Chlamydomonas reinhardtii
Cre12.g513254 Chlamydomonas reinhardtii
CsaV3_4G036180 Cucumis sativus L.
CSS0038508 Camellia sinensis var. sinensis
CSS0047589 Camellia sinensis var. sinensis
CSS0047763 Camellia sinensis var. sinensis
DCAR_001246 Daucus carota
DCAR_016625 Daucus carota
Dinv33261 Davidia involucrata
Dinv40937 Davidia involucrata
Duzib168G1024 Durio zibethinus
ECA234G4717 Erigeron canadensis
EL10Ac3g06070 Beta vulgaris
EL10Ac6g13901 Beta vulgaris
Eucgr.C03174 Eucalyptus grandis
Eucgr.I01572 Eucalyptus grandis
FAN15G0612 Fragaria x ananassa
FAN20G1613 Fragaria x ananassa
FAN24G2598 Fragaria x ananassa
FAN27G0230 Fragaria x ananassa
FvH4_2g36980 Fragaria vesca
Glyma.06G058300 Glycine max
Glyma.16G045700 Glycine max
Gohir.A06G080800 Gossypium hirsutum
Gohir.D06G080200 Gossypium hirsutum
Gorai.010G093400 Gossypium raimondii
GSVIVG01035501001 Vitis vinifera
HanXRQChr12g0358911 Helianthus annuus
Haze_14983 Corylus avellana
Haze_18326 Corylus avellana
Haze_26489 Corylus avellana
Hma1.2p1_0421F.1_g149910 Hydrangea macrophylla
HPP92_016228 Vanilla planifolia
Hund25551 Selenicereus undatus
Lalb_Chr08g0244661 Lupinus albus
Lalb_Chr24g0402941 Lupinus albus
Lj1g0014882 Lotus japonicus
Lj1g0021198 Lotus japonicus
Lj7A207G10 Lonicera japonica
Lj7A619G47 Lonicera japonica
Lsat_1_v5_gn_5_79200 Lactuca sativa
Manes.03G056300 Manihot esculenta
Manes.11G073600 Manihot esculenta
Mapoly0061s0078 Marchantia polymorpha
Mapoly0175s0022 Marchantia polymorpha
MBI02_g10998_MAGBIO Magnolia biondii
MBI11_g03700_MAGBIO Magnolia biondii
MCO02G180 Micromonas commoda
Medtr3g105470 Medicago truncatula
Medtr7g084670 Medicago truncatula
Medtr8g465220 Medicago truncatula
MELO3C016926.2 Cucumis melo
Migut.A00329 Erythranthe guttata
MSTRG.25845 Avicennia marina
Nitab4.5_0000508g0050 Nicotiana tabacum
Nitab4.5_0000508g0070 Nicotiana tabacum
Nitab4.5_0000519g0360 Nicotiana tabacum
Nitab4.5_0002901g0040 Nicotiana tabacum
Nitab4.5_0007819g0010 Nicotiana tabacum
Nn1g06835 Nelumbo nucifera
Nn4g22079 Nelumbo nucifera
Nn6g35677 Nelumbo nucifera
Oeu030212.1 Olea europaea
Os04g0401800 Oryza sativa ssp. japonica
Os09g0439000 Oryza sativa ssp. japonica
Peaxi162Scf00420g00933 Petunia axillaris
Peaxi162Scf00922g00028 Petunia axillaris
PGR044G1373 Punica granatum
PGR142G3910 Punica granatum
PGSC0003DMG400020189 Solanum tuberosum
PGSC0003DMG401007391 Solanum tuberosum
PGSC0003DMG402007391 Solanum tuberosum
Phvul.001G099000 Phaseolus vulgaris
Phvul.009G084300 Phaseolus vulgaris
Potri.006G218300 Populus trichocarpa
Potri.014G139600 Populus trichocarpa
Pp3c10_11880 Physcomitrium patens
Pp3c5_18670 Physcomitrium patens
PRCOL_00005440 Prasinoderma coloniale
Prupe.1G401600 Prunus persica
Psat0s3617g0120 Pisum sativum
Psat0ss5882g0280 Pisum sativum
Psat1g075480 Pisum sativum
Psat1g075520 Pisum sativum
Psat3g091760 Pisum sativum
Psat3g174200 Pisum sativum
PSO017G3526 Papaver somniferum
PSO104G0144 Papaver somniferum
PSO421G0041 Papaver somniferum
QL02p068572 Quercus lobata
RcHm_v2.0_Chr3g0493951 Rosa chinensis
RcHm_v2.0_Chr6g0304781 Rosa chinensis
Rhsim07G0169900 Rhododendron simsii
Rhsim08G0037700 Rhododendron simsii
Sabra06G0168300 Salix brachista
Sabra14G0105300 Salix brachista
SalBow4G0753 Salvia bowleyana
SalBow4G1801 Salvia bowleyana
Sc03g0005350 Simmondsia chinensis
Sc13g0011050 Simmondsia chinensis
Sed0021455 Sechium edule
SEGI_09275 Sequoiadendron giganteum
SEGI_28428 Sequoiadendron giganteum
SEGI_40063 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36316 Striga asiatica
SMO118G0039 Selaginella moellendorffii
SMO137G0395 Selaginella moellendorffii
SMO140G0067 Selaginella moellendorffii
SMO144G0017 Selaginella moellendorffii
Solyc08g067250.4 Solanum lycopersicum
Sopen02g039260 Solanum pennellii
Sopen08g021180 Solanum pennellii
Sp2g15800 Schrenkiella parvula
Sp4g27750 Schrenkiella parvula
TAR622G0456 Trochodendron aralioides
TAR624G0540 Trochodendron aralioides
THA.LOC104815085 Tarenaya hassleriana
THA.LOC104825658 Tarenaya hassleriana
Thecc.04G051000 Theobroma cacao
Thecc.09G065900 Theobroma cacao
Thhalv10001326m.g Eutrema salsugineum
Thhalv10004102m.g Eutrema salsugineum
TPR.G21419 Trifolium pratense
TPR.G31656 Trifolium pratense
TPR.G34418 Trifolium pratense
TPR.G35146 Trifolium pratense
TWI34G1174 Tripterygium wilfordii
TWI53G1329 Tripterygium wilfordii
unitig_748.g8189 Utricularia gibba
vmacro05109 Vaccinium macrocarpon
vmacro18401 Vaccinium macrocarpon
VMungo1309G0944 Vigna mungo
VMungo1383G0384 Vigna mungo
Zm00001eb100110 Zea mays
Zm00001eb275110 Zea mays
Zm00001eb421590 Zea mays

User provided reference genes

Program Settings