Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41230 Brassica napus
A05p43390 Brassica napus
A09p01870 Brassica napus
Aa31LG2G1970 Aethionema arabicum
Aa31LG5G14550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2517 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5602 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.243 Anthoceros agrestis
Actinidia22087 Actinidia chinensis
Actinidia30557 Actinidia chinensis
AL1G64640 Arabidopsis lyrata
AL3G13880 Arabidopsis lyrata
Aqoxy1G00500 Aquilegia oxysepala
Aqoxy2G00587 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0MAW8U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJ7Z8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GFD0T8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5U228 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N26BUN Arachis hypogaea
AT1G54385 Arabidopsis thaliana
AT3G03970 Arabidopsis thaliana
ATR0605G207 Amborella trichopoda
ATR0697G133 Amborella trichopoda
Atru.chr2.1365 Acer truncatum
AUR62032062 Chenopodium quinoa
AUR62032685 Chenopodium quinoa
BcaB01g02049 Brassica carinata
BcaC05g29361 Brassica carinata
BcaC05g29887 Brassica carinata
BcaC05g30237 Brassica carinata
BcaC05g30298 Brassica carinata
BcaC09g47770 Brassica carinata
BcaNung04049 Brassica carinata
BcaNung04050 Brassica carinata
BcaNung04531 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00480 Brassica napus
BolC1t05779H Brassica oleracea
BolC1t05788H Brassica oleracea
BolC5t34961H Brassica oleracea
BolC9t53126H Brassica oleracea
BraA01t04546Z Brassica rapa
BraA05t23079Z Brassica rapa
BraA09t35838Z Brassica rapa
BraA09t41584Z Brassica rapa
C02p01300 Brassica napus
C05p56450 Brassica napus
C05p63090 Brassica napus
C09p01910 Brassica napus
CAN.G317.13 Capsicum annuum
CANSAT56G0778 Cannabis sativa
CANSAT78G1787 Cannabis sativa
CARHR055490 Cardamine hirsuta
CARHR078110 Cardamine hirsuta
Carub.0002s0958 Capsella rubella
Carub.0003s0322 Capsella rubella
Ca_21768_v3 Cicer arietinum L.
Ca_25618_v3 Cicer arietinum L.
CBR_g25968 Chara braunii
Cc06_g22870 Coffea canephora
CDE06G0484 Ceratophyllum demersum
CDE07G0844 Ceratophyllum demersum
CDE07G1683 Ceratophyllum demersum
Ciclev10019371m.g Citrus clementina
CiPaw.06G089600 Carya illinoinensis
CiPaw.09G001500 Carya illinoinensis
ClCG04G005280 Citrullus lanatus
COL.COLO4_13609 Corchorus olitorius
Cpa.g.sc51.102 Carica papaya
Cpa.g.sc51.107 Carica papaya
CsaV3_4G013310 Cucumis sativus L.
CSS0039180 Camellia sinensis var. sinensis
DCAR_009680 Daucus carota
DCAR_019880 Daucus carota
Dinv37011 Davidia involucrata
Duzib106G1793 Durio zibethinus
Duzib128G1865 Durio zibethinus
Duzib177G0419 Durio zibethinus
ECA238G0201 Erigeron canadensis
ECA285G0003 Erigeron canadensis
EL10Ac3g06814 Beta vulgaris
Eucgr.A02093 Eucalyptus grandis
Eucgr.K01495 Eucalyptus grandis
FAN13G1757 Fragaria x ananassa
FAN18G3983 Fragaria x ananassa
FAN19G0867 Fragaria x ananassa
FAN23G0882 Fragaria x ananassa
FAN26G3194 Fragaria x ananassa
FvH4_1g28060 Fragaria vesca
FvH4_5g28880 Fragaria vesca
Glyma.02G071700 Glycine max
Glyma.16G041800 Glycine max
Glyma.16G152900 Glycine max
Glyma.19G110600 Glycine max
Gohir.A11G259100 Gossypium hirsutum
Gohir.D11G269200 Gossypium hirsutum
Gorai.007G289100 Gossypium raimondii
GSVIVG01033391001 Vitis vinifera
HanXRQChr01g0024711 Helianthus annuus
HanXRQChr03g0090421 Helianthus annuus
HanXRQChr09g0266371 Helianthus annuus
HanXRQChr16g0523881 Helianthus annuus
Haze_19412 Corylus avellana
Hma1.2p1_0376F.1_g139170 Hydrangea macrophylla
HPP92_004178 Vanilla planifolia
Hund19241 Selenicereus undatus
Lalb_Chr02g0157061 Lupinus albus
Lalb_Chr06g0173961 Lupinus albus
Lalb_Chr21g0317171 Lupinus albus
Lj1A1137T83 Lonicera japonica
Lj1g0027644 Lotus japonicus
Lj2A357T88 Lonicera japonica
Lj2g0007320 Lotus japonicus
Lsat_1_v5_gn_1_59620 Lactuca sativa
Lsat_1_v5_gn_2_57641 Lactuca sativa
Manes.08G150100 Manihot esculenta
Manes.09G142100 Manihot esculenta
Mapoly0001s0286 Marchantia polymorpha
MD12G1002800 Malus domestica
MD12G1002900 Malus domestica
MD12G1003000 Malus domestica
MD14G1002300 Malus domestica
Medtr0495s0010 Medicago truncatula
Medtr6g032885 Medicago truncatula
MELO3C008798.2 Cucumis melo
Migut.J01894 Erythranthe guttata
MSTRG.19938 Avicennia marina
Nitab4.5_0000001g0070 Nicotiana tabacum
Nitab4.5_0002825g0010 Nicotiana tabacum
Nn2g15886 Nelumbo nucifera
Nn4g24247 Nelumbo nucifera
Nn5g30180 Nelumbo nucifera
Nn7g35824 Nelumbo nucifera
Oeu012406.1 Olea europaea
Oeu060005.1 Olea europaea
Os11g0580000 Oryza sativa ssp. japonica
Os12g0624800 Oryza sativa ssp. japonica
Peaxi162Scf00076g01031 Petunia axillaris
PGR042G2987 Punica granatum
PGR142G2675 Punica granatum
PGSC0003DMG400008643 Solanum tuberosum
Phvul.001G110000 Phaseolus vulgaris
Phvul.004G079400 Phaseolus vulgaris
Potri.013G058700 Populus trichocarpa
Potri.019G033900 Populus trichocarpa
Pp3c18_19210 Physcomitrium patens
Pp3c19_3520 Physcomitrium patens
Pp3c19_3524 Physcomitrium patens
Pp3c21_4720 Physcomitrium patens
Pp3c22_2440 Physcomitrium patens
Pp3c3_27710 Physcomitrium patens
Pp3c5_7300 Physcomitrium patens
Pp3c6_17270 Physcomitrium patens
Prupe.7G003500 Prunus persica
Psat1g096120 Pisum sativum
PSO339G2750 Papaver somniferum
PSO384G0567 Papaver somniferum
QL07p020065 Quercus lobata
RcHm_v2.0_Chr3g0497191 Rosa chinensis
Rhsim03G0001200 Rhododendron simsii
Sabra11G0089600 Salix brachista
Sabra13G0052200 Salix brachista
Sabra15G0069100 Salix brachista
Sabra15G0069300 Salix brachista
Sabra15G0072800 Salix brachista
Sabra18G0055600 Salix brachista
Sabra18G0055700 Salix brachista
Sabra19G0041800 Salix brachista
SalBow6G1268 Salvia bowleyana
Sc13g0002710 Simmondsia chinensis
Sc19g0006470 Simmondsia chinensis
Sed0005648 Sechium edule
Sed0027207 Sechium edule
SEGI_06046 Sequoiadendron giganteum
SEGI_06949 Sequoiadendron giganteum
SEGI_09484 Sequoiadendron giganteum
SEGI_11623 Sequoiadendron giganteum
SEGI_12350 Sequoiadendron giganteum
SEGI_29772 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32450 Striga asiatica
SGA_v2.0_scaffold24G10518 Striga asiatica
SHI21767 Sapria himalayana
SMO364G0157 Selaginella moellendorffii
Solyc03g062700.4 Solanum lycopersicum
Sopen03g015010 Solanum pennellii
Sp3g02940 Schrenkiella parvula
Sp6g02300 Schrenkiella parvula
TAR369G0075 Trochodendron aralioides
TAR623G1645 Trochodendron aralioides
TAR633G2041 Trochodendron aralioides
TAR636G3347 Trochodendron aralioides
THA.LOC104802863 Tarenaya hassleriana
THA.LOC104820732 Tarenaya hassleriana
THA.LOC104821510 Tarenaya hassleriana
Thecc.05G293700 Theobroma cacao
Thhalv10022309m.g Eutrema salsugineum
Thhalv10028548m.g Eutrema salsugineum
TPR.G34626 Trifolium pratense
TWI34G0012 Tripterygium wilfordii
TWI60G1263 Tripterygium wilfordii
unitig_899.g15643 Utricularia gibba
vmacro12571 Vaccinium macrocarpon
VMungo1383G1871 Vigna mungo
Zm00001eb032360 Zea mays
Zm00001eb200470 Zea mays

User provided reference genes

Program Settings