Gene: COL.COLO4_13609
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_13609
- Transcript Identifier COL.rna12395
- Gene Type Coding gene
- Location AWUE01015209.1 : 115704-117669 : negative
Gene Family Information
- ID HOM05D003349
- #Genes/#Species 204/94
- Phylogenetic origin
- ID ORTHO05D003898
- #Genes/#Species 200/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna12395
- GenBank OMO98953.1
- id gene13581
- gene_name COLO4_13609
- uniprot A0A1R3JVP4
Descriptions
- Description Survival motor neuron interacting protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061760 | ISO | PLAZA Integrative Orthology | antifungal innate immune response | AT3G03970 |
| GO:0007097 | ISO | PLAZA Integrative Orthology | nuclear migration | AT1G54385 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G54385 |
| GO:0003779 | ISO | PLAZA Integrative Orthology | actin binding | AT1G54385 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT1G54385 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 20.4.1.1 | Cytoskeleton organisation.nuclear dynamics.nuclear envelope to cytoskeleton bridging.actin cytoskeleton connecting factor (SINE) |