Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p25900 Brassica napus
A10p25910 Brassica napus
Aa31LG3G15330 Aethionema arabicum
Aa31LG4G9320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3889 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4826 Anthoceros agrestis
Actinidia26152 Actinidia chinensis
Ah.03g137170 Amaranthus hybridus
AL2G30800 Arabidopsis lyrata
AL3G26750 Arabidopsis lyrata
AL3G45490 Arabidopsis lyrata
AL6G22630 Arabidopsis lyrata
AL8G17710 Arabidopsis lyrata
Aqoxy7G01202 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32MGU6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4G20NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9MB0YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WQ6HRD Arachis hypogaea
AT1G71190 Arabidopsis thaliana
AT5G11870 Arabidopsis thaliana
ATR0026G038 Amborella trichopoda
ATR0584G052 Amborella trichopoda
Atru.chr4.1466 Acer truncatum
Atru.chr7.1081 Acer truncatum
AUR62014227 Chenopodium quinoa
AUR62041115 Chenopodium quinoa
BcaB03g14876 Brassica carinata
BcaB03g15596 Brassica carinata
BcaB08g35547 Brassica carinata
BcaC01g00871 Brassica carinata
BcaC04g19190 Brassica carinata
BolC3t20831H Brassica oleracea
BolC9t59327H Brassica oleracea
BraA10t44653Z Brassica rapa
C03p85430 Brassica napus
C09p64990 Brassica napus
CAN.G798.6 Capsicum annuum
CANSAT11G1659 Cannabis sativa
CANSAT25G2318 Cannabis sativa
CARHR056290 Cardamine hirsuta
CARHR064460 Cardamine hirsuta
CARHR201290 Cardamine hirsuta
Carub.0002s1807 Capsella rubella
Carub.0006s1040 Capsella rubella
Ca_00066_v3 Cicer arietinum L.
Ca_17783_v3 Cicer arietinum L.
CBR_g3553 Chara braunii
Cc02_g22610 Coffea canephora
CDE06G1849 Ceratophyllum demersum
Ciclev10002064m.g Citrus clementina
Ciclev10009178m.g Citrus clementina
CiPaw.05G048000 Carya illinoinensis
CiPaw.15G038500 Carya illinoinensis
ClCG09G013890 Citrullus lanatus
COL.COLO4_11783 Corchorus olitorius
COL.COLO4_11784 Corchorus olitorius
COL.COLO4_21063 Corchorus olitorius
Cpa.g.sc113.53 Carica papaya
CsaV3_6G037450 Cucumis sativus L.
CSS0010820 Camellia sinensis var. sinensis
CSS0025935 Camellia sinensis var. sinensis
CSS0029284 Camellia sinensis var. sinensis
CSS0034523 Camellia sinensis var. sinensis
CSS0049502 Camellia sinensis var. sinensis
DCAR_006703 Daucus carota
Dinv19374 Davidia involucrata
Dinv23426 Davidia involucrata
Dinv27990 Davidia involucrata
Duzib132G0935 Durio zibethinus
Duzib168G2080 Durio zibethinus
EL10Ac6g14059 Beta vulgaris
Eucgr.C00652 Eucalyptus grandis
Eucgr.I02729 Eucalyptus grandis
FAN08G1391 Fragaria x ananassa
FAN15G3499 Fragaria x ananassa
FAN18G2082 Fragaria x ananassa
FAN20G3172 Fragaria x ananassa
FAN24G1665 Fragaria x ananassa
FAN27G3440 Fragaria x ananassa
FvH4_2g31810 Fragaria vesca
FvH4_5g29250 Fragaria vesca
Glyma.04G051500 Glycine max
Glyma.05G174100 Glycine max
Glyma.06G052300 Glycine max
Glyma.08G131300 Glycine max
Glyma.08G186900 Glycine max
Glyma.15G046100 Glycine max
Gohir.A06G087400 Gossypium hirsutum
Gohir.A13G035200 Gossypium hirsutum
Gohir.D06G086800 Gossypium hirsutum
Gohir.D06G126566 Gossypium hirsutum
Gohir.D13G033600 Gossypium hirsutum
Gorai.010G100200 Gossypium raimondii
Gorai.013G038000 Gossypium raimondii
GSVIVG01022875001 Vitis vinifera
GSVIVG01035399001 Vitis vinifera
HanXRQChr03g0073631 Helianthus annuus
Haze_01710 Corylus avellana
Haze_18178 Corylus avellana
Haze_18185 Corylus avellana
Hma1.2p1_0217F.1_g092140 Hydrangea macrophylla
Hma1.2p1_0217F.1_g092160 Hydrangea macrophylla
HPP92_000672 Vanilla planifolia
HPP92_011386 Vanilla planifolia
Lalb_Chr07g0185441 Lupinus albus
Lalb_Chr07g0185451 Lupinus albus
Lalb_Chr08g0245071 Lupinus albus
Lalb_Chr14g0366311 Lupinus albus
Lalb_Chr18g0060911 Lupinus albus
Lalb_Chr18g0060921 Lupinus albus
Lj1g0012846 Lotus japonicus
Lj4g0028052 Lotus japonicus
Lj5g0008225 Lotus japonicus
Lj6g0004299 Lotus japonicus
Lj9C304T9 Lonicera japonica
Lsat_1_v5_gn_3_57281 Lactuca sativa
Lsat_1_v5_gn_9_118660 Lactuca sativa
Manes.03G048000 Manihot esculenta
Manes.07G017000 Manihot esculenta
Manes.10G126350 Manihot esculenta
Mapoly0016s0101 Marchantia polymorpha
MBI01_g01261_MAGBIO Magnolia biondii
MD08G1062700 Malus domestica
MD08G1232600 Malus domestica
MD08G1233100 Malus domestica
MD15G1059000 Malus domestica
Medtr1g016080 Medicago truncatula
Medtr2g006770 Medicago truncatula
Medtr3g104420 Medicago truncatula
Medtr8g089715 Medicago truncatula
MELO3C014372.2 Cucumis melo
Migut.B00827 Erythranthe guttata
MSTRG.16515 Avicennia marina
Nitab4.5_0000816g0100 Nicotiana tabacum
Nitab4.5_0007514g0030 Nicotiana tabacum
Nn5g28307 Nelumbo nucifera
Nn5g28309 Nelumbo nucifera
Nn6g35489 Nelumbo nucifera
Nn7g38013 Nelumbo nucifera
Nn8g38852 Nelumbo nucifera
Oeu008899.2 Olea europaea
Os01g0197500 Oryza sativa ssp. japonica
Os01g0962200 Oryza sativa ssp. japonica
Peaxi162Scf00011g00534 Petunia axillaris
PGR031G0256 Punica granatum
PGR044G2065 Punica granatum
PGR142G1307 Punica granatum
PGSC0003DMG400023796 Solanum tuberosum
Phvul.002G259100 Phaseolus vulgaris
Phvul.009G077800 Phaseolus vulgaris
Phvul.011G155400 Phaseolus vulgaris
Potri.001G211600 Populus trichocarpa
Potri.006G228700 Populus trichocarpa
Pp3c3_10770 Physcomitrium patens
Prupe.1G411500 Prunus persica
Prupe.1G571000 Prunus persica
Psat0s4497g0080 Pisum sativum
Psat0ss1279g0400 Pisum sativum
Psat1g221280 Pisum sativum
Psat7g059520 Pisum sativum
PSO063G3502 Papaver somniferum
PSO170G2758 Papaver somniferum
PSO528G0003 Papaver somniferum
PSO832G1640 Papaver somniferum
QL02p001118 Quercus lobata
QL02p099154 Quercus lobata
RcHm_v2.0_Chr1g0326971 Rosa chinensis
RcHm_v2.0_Chr4g0400641 Rosa chinensis
RcHm_v2.0_Chr5g0035441 Rosa chinensis
RcHm_v2.0_Chr6g0311011 Rosa chinensis
RcHm_v2.0_Chr7g0222011 Rosa chinensis
Rhsim05G0119500 Rhododendron simsii
Sabra01G0163400 Salix brachista
Sabra06G0177100 Salix brachista
Sc07g0004860 Simmondsia chinensis
Sed0021534 Sechium edule
SEGI_25464 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31330 Striga asiatica
SMO339G0029 Selaginella moellendorffii
SMO356G0484 Selaginella moellendorffii
Solyc01g104080.4 Solanum lycopersicum
Sopen01g046490 Solanum pennellii
Sp5g26350 Schrenkiella parvula
Sp6g31730 Schrenkiella parvula
TAR381G0360 Trochodendron aralioides
TAR383G0517 Trochodendron aralioides
THA.LOC104798496 Tarenaya hassleriana
THA.LOC104799163 Tarenaya hassleriana
THA.LOC104812760 Tarenaya hassleriana
Thecc.02G087700 Theobroma cacao
Thecc.09G054400 Theobroma cacao
Thhalv10014390m.g Eutrema salsugineum
Thhalv10018974m.g Eutrema salsugineum
TPR.G13175 Trifolium pratense
TPR.G2088 Trifolium pratense
TPR.G3530 Trifolium pratense
TPR.G40725 Trifolium pratense
TPR.G6209 Trifolium pratense
TPR.G6212 Trifolium pratense
TWI14G0966 Tripterygium wilfordii
TWI34G1634 Tripterygium wilfordii
vmacro19886 Vaccinium macrocarpon
VMungo0251G2850 Vigna mungo
VMungo1127G2090 Vigna mungo
VMungo1309G0460 Vigna mungo
VMungo1309G2424 Vigna mungo
Zm00001eb337900 Zea mays
Zm00001eb362500 Zea mays
Zm00001eb414800 Zea mays

User provided reference genes

Program Settings