Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p22750 Brassica napus
A01p32530 Brassica napus
A05p15600 Brassica napus
A05p16740 Brassica napus
A05p26050 Brassica napus
A08p11470 Brassica napus
Aa31LG9G2570 Aethionema arabicum
Actinidia08482 Actinidia chinensis
Actinidia36948 Actinidia chinensis
Actinidia40133 Actinidia chinensis
Ah.07g204220 Amaranthus hybridus
Ah.16g101520 Amaranthus hybridus
AL3G36920 Arabidopsis lyrata
AL7G41070 Arabidopsis lyrata
Aqoxy5G00437 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1L9YJM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BRW3YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JLXU2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MJA9UR Arachis hypogaea
AT3G22630 Arabidopsis thaliana
AT4G14800 Arabidopsis thaliana
ATR0665G219 Amborella trichopoda
ATR0665G448 Amborella trichopoda
Atru.ctg752_3.41 Acer truncatum
AUR62018258 Chenopodium quinoa
AUR62033662 Chenopodium quinoa
AUR62033663 Chenopodium quinoa
AUR62034724 Chenopodium quinoa
AUR62034725 Chenopodium quinoa
AUR62037750 Chenopodium quinoa
BcaB04g18261 Brassica carinata
BcaB04g20508 Brassica carinata
BcaB06g26377 Brassica carinata
BcaC02g11604 Brassica carinata
BcaC05g28030 Brassica carinata
BcaC07g37854 Brassica carinata
BcaC08g44272 Brassica carinata
BcaC09g49185 Brassica carinata
BcaC09g50161 Brassica carinata
BcaNung00332 Brassica carinata
BcaNung06727 Brassica carinata
BolC1t02760H Brassica oleracea
BolC1t04123H Brassica oleracea
BolC5t32787H Brassica oleracea
BolC6t36889H Brassica oleracea
BolC8t48244H Brassica oleracea
BraA01t02187Z Brassica rapa
BraA01t03383Z Brassica rapa
BraA05t20475Z Brassica rapa
BraA05t20578Z Brassica rapa
BraA05t21489Z Brassica rapa
BraA08t33141Z Brassica rapa
C01p28310 Brassica napus
C01p41690 Brassica napus
C04p13400 Brassica napus
C05p40450 Brassica napus
C06p16930 Brassica napus
CAN.G1094.26 Capsicum annuum
CANSAT56G0535 Cannabis sativa
CANSAT56G2276 Cannabis sativa
CARHR098490 Cardamine hirsuta
CARHR221350 Cardamine hirsuta
Carub.0003s2277 Capsella rubella
Carub.0007s2733 Capsella rubella
Ca_24419_v3 Cicer arietinum L.
CBR_g31992 Chara braunii
Cc03_g04050 Coffea canephora
CDE06G2608 Ceratophyllum demersum
CDE07G1821 Ceratophyllum demersum
Cfa008471 Carpinus fangiana
Ciclev10005907m.g Citrus clementina
CiPaw.01G198200 Carya illinoinensis
CiPaw.02G122900 Carya illinoinensis
ClCG05G005040 Citrullus lanatus
ClCG06G006350 Citrullus lanatus
COL.COLO4_11870 Corchorus olitorius
COL.COLO4_21517 Corchorus olitorius
Cpa.g.sc54.84 Carica papaya
Cpa.g.sc58.78 Carica papaya
Cre14.g610950 Chlamydomonas reinhardtii
CsaV3_3G013100 Cucumis sativus L.
CSS0015937 Camellia sinensis var. sinensis
CSS0029971 Camellia sinensis var. sinensis
DCAR_027230 Daucus carota
Dinv09872 Davidia involucrata
Dinv14018 Davidia involucrata
Dinv44556 Davidia involucrata
Duzib151G0089 Durio zibethinus
Duzib212G0469 Durio zibethinus
ECA236G4966 Erigeron canadensis
EL10Ac3g06480 Beta vulgaris
Eucgr.D00194 Eucalyptus grandis
Eucgr.H03435 Eucalyptus grandis
FAN01G0310 Fragaria x ananassa
FAN03G0633 Fragaria x ananassa
FAN06G0247 Fragaria x ananassa
FAN10G0354 Fragaria x ananassa
FAN10G2013 Fragaria x ananassa
FAN12G1048 Fragaria x ananassa
FvH4_4g15960 Fragaria vesca
FvH4_7g08790 Fragaria vesca
Glyma.10G295600 Glycine max
Glyma.20G245500 Glycine max
Gohir.A02G032700 Gossypium hirsutum
Gohir.A09G217500 Gossypium hirsutum
Gohir.D02G039400 Gossypium hirsutum
Gohir.D09G219900 Gossypium hirsutum
Gorai.005G043600 Gossypium raimondii
Gorai.006G240900 Gossypium raimondii
GSVIVG01001182001 Vitis vinifera
HanXRQChr16g0526461 Helianthus annuus
HanXRQChr17g0565551 Helianthus annuus
Haze_11202 Corylus avellana
Haze_26265 Corylus avellana
Hma1.2p1_0602F.1_g187490 Hydrangea macrophylla
Hma1.2p1_0602F.1_g187520 Hydrangea macrophylla
Hma1.2p1_1572F.1_g291450 Hydrangea macrophylla
Hma1.2p1_1572F.1_g291460 Hydrangea macrophylla
Hma1.2p1_2201F.1_g317043 Hydrangea macrophylla
Hma1.2p1_2201F.1_g317046 Hydrangea macrophylla
HPP92_001911 Vanilla planifolia
Hund12101 Selenicereus undatus
Lalb_Chr05g0211141 Lupinus albus
Lj3A732G69 Lonicera japonica
Lj6A602G55 Lonicera japonica
Lj6A605G73 Lonicera japonica
LjContig00222g0022811 Lotus japonicus
Lsat_1_v5_gn_4_26160 Lactuca sativa
Manes.03G175800 Manihot esculenta
Manes.05G079300 Manihot esculenta
Manes.15G030800 Manihot esculenta
Mapoly0044s0041 Marchantia polymorpha
MBI01_g46397_MAGBIO Magnolia biondii
MCO08G200 Micromonas commoda
MCO08G250 Micromonas commoda
MD05G1164200 Malus domestica
MD13G1196600 Malus domestica
MD16G1197000 Malus domestica
Medtr2g050000 Medicago truncatula
Medtr5g006840 Medicago truncatula
Medtr5g012470 Medicago truncatula
MELO3C006517.2 Cucumis melo
Migut.G00362 Erythranthe guttata
MSTRG.4045 Avicennia marina
MSTRG.9968 Avicennia marina
Nitab4.5_0002307g0060 Nicotiana tabacum
Nitab4.5_0004062g0050 Nicotiana tabacum
Nn1g02376 Nelumbo nucifera
Nn6g34120 Nelumbo nucifera
Oeu018973.1 Olea europaea
Oeu030570.1 Olea europaea
Oeu053320.1 Olea europaea
Oeu058967.1 Olea europaea
Os03g0695600 Oryza sativa ssp. japonica
Peaxi162Scf00092g00321 Petunia axillaris
Peaxi162Scf00218g00156 Petunia axillaris
Peaxi162Scf00245g00914 Petunia axillaris
PGR004G2164 Punica granatum
PGSC0003DMG400032248 Solanum tuberosum
Phvul.007G004300 Phaseolus vulgaris
Potri.008G155500 Populus trichocarpa
Potri.010G084800 Populus trichocarpa
Pp3c20_18180 Physcomitrium patens
Pp3c25_9390 Physcomitrium patens
Pp3c9_3580 Physcomitrium patens
PRCOL_00001675 Prasinoderma coloniale
Prupe.1G017400 Prunus persica
Psat0s1985g0120 Pisum sativum
Psat0s2648g0080 Pisum sativum
PSO210G2325 Papaver somniferum
PSO761G0105 Papaver somniferum
QL06p001676 Quercus lobata
QL08p013026 Quercus lobata
RcHm_v2.0_Chr4g0415561 Rosa chinensis
RcHm_v2.0_Chr4g0416661 Rosa chinensis
Rhsim04G0199900 Rhododendron simsii
Sabra08G0118300 Salix brachista
Sabra10G0058500 Salix brachista
SalBow2G2299 Salvia bowleyana
Sc13g0004590 Simmondsia chinensis
Sed0006877 Sechium edule
Sed0017593 Sechium edule
Sed0022685 Sechium edule
SEGI_17817 Sequoiadendron giganteum
SEGI_38748 Sequoiadendron giganteum
SGA_v2.0_scaffold191G40492 Striga asiatica
SMO364G0169 Selaginella moellendorffii
Solyc09g082320.3 Solanum lycopersicum
Sopen09g031200 Solanum pennellii
Sp3g20390 Schrenkiella parvula
Sp7g12930 Schrenkiella parvula
TAR362G0533 Trochodendron aralioides
TAR633G1233 Trochodendron aralioides
THA.LOC104803041 Tarenaya hassleriana
THA.LOC104808561 Tarenaya hassleriana
Thecc.01G274700 Theobroma cacao
Thecc.04G235300 Theobroma cacao
Thhalv10021541m.g Eutrema salsugineum
Thhalv10026266m.g Eutrema salsugineum
TPR.G25883 Trifolium pratense
TPR.G37956 Trifolium pratense
TWI09G1548 Tripterygium wilfordii
TWI73G0562 Tripterygium wilfordii
unitig_32.g11726 Utricularia gibba
unitig_748.g8540 Utricularia gibba
vmacro08790 Vaccinium macrocarpon
vmacro08791 Vaccinium macrocarpon
VMungo0720G2628 Vigna mungo
Zm00001eb053790 Zea mays
Zm00001eb216990 Zea mays

User provided reference genes

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