Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33220 Brassica napus
A05p04270 Brassica napus
A07p24920 Brassica napus
A09p52310 Brassica napus
Aa31LG10G14190 Aethionema arabicum
Aa31LG1G25830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3164 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1519 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1685 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis
Actinidia02460 Actinidia chinensis
Actinidia18382 Actinidia chinensis
Ah.07g203400 Amaranthus hybridus
AL4G43040 Arabidopsis lyrata
AL4G43080 Arabidopsis lyrata
AL5G24360 Arabidopsis lyrata
AL5G42150 Arabidopsis lyrata
AL6G43600 Arabidopsis lyrata
Aqoxy2G00629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea
AT2G44160 Arabidopsis thaliana
AT3G59970 Arabidopsis thaliana
ATR0053G017 Amborella trichopoda
Atru.chr3.2621 Acer truncatum
AUR62002511 Chenopodium quinoa
AUR62002512 Chenopodium quinoa
AUR62004352 Chenopodium quinoa
AUR62022557 Chenopodium quinoa
AUR62023682 Chenopodium quinoa
BcaB01g03327 Brassica carinata
BcaB01g06154 Brassica carinata
BcaB02g07437 Brassica carinata
BcaB06g29359 Brassica carinata
BcaB06g29361 Brassica carinata
BcaC02g12332 Brassica carinata
BcaC07g40402 Brassica carinata
BcaC07g40537 Brassica carinata
BcaC08g45017 Brassica carinata
BolC3t12564H Brassica oleracea
BolC4t22138H Brassica oleracea
BolC6t37812H Brassica oleracea
BolC8t51101H Brassica oleracea
BraA04t18781Z Brassica rapa
BraA05t19412Z Brassica rapa
BraA07t30134Z Brassica rapa
BraA09t40660Z Brassica rapa
C04p05050 Brassica napus
C04p70910 Brassica napus
C06p26490 Brassica napus
C08p34970 Brassica napus
CAN.G1177.14 Capsicum annuum
CAN.G438.57 Capsicum annuum
CAN.G532.79 Capsicum annuum
CAN.G694.27 Capsicum annuum
CANSAT54G2167 Cannabis sativa
CANSAT56G2399 Cannabis sativa
CARHR139330 Cardamine hirsuta
CARHR170290 Cardamine hirsuta
Carub.0004s2671 Capsella rubella
Carub.0005s2670 Capsella rubella
Ca_26297_v3 Cicer arietinum L.
CBR_g37215 Chara braunii
CDE06G0339 Ceratophyllum demersum
CDE07G1142 Ceratophyllum demersum
Cfa008541 Carpinus fangiana
Cfa021656 Carpinus fangiana
Ciclev10019406m.g Citrus clementina
CiPaw.01G204000 Carya illinoinensis
CiPaw.02G126200 Carya illinoinensis
ClCG06G008390 Citrullus lanatus
COL.COLO4_20225 Corchorus olitorius
COL.COLO4_34333 Corchorus olitorius
Cpa.g.sc9.233 Carica papaya
Cre10.g433600 Chlamydomonas reinhardtii
CsaV3_2G011840 Cucumis sativus L.
CSS0014401 Camellia sinensis var. sinensis
CSS0029511 Camellia sinensis var. sinensis
CSS0030539 Camellia sinensis var. sinensis
DCAR_005464 Daucus carota
DCAR_027487 Daucus carota
Dinv24735 Davidia involucrata
Duzib151G0199 Durio zibethinus
Duzib212G0020 Durio zibethinus
Duzib268G1600 Durio zibethinus
ECA236G5120 Erigeron canadensis
EL10Ac3g06195 Beta vulgaris
Eucgr.A00394 Eucalyptus grandis
Eucgr.A00395 Eucalyptus grandis
FAN19G0462 Fragaria x ananassa
FAN23G0512 Fragaria x ananassa
FAN23G0954 Fragaria x ananassa
FAN26G0496 Fragaria x ananassa
FAN26G1737 Fragaria x ananassa
FAN26G2639 Fragaria x ananassa
FAN26G2889 Fragaria x ananassa
FAN28G1981 Fragaria x ananassa
FvH4_1g00040 Fragaria vesca
FvH4_1g08980 Fragaria vesca
FvH4_7g02331 Fragaria vesca
Glyma.04G256100 Glycine max
Glyma.06G325300 Glycine max
Gohir.A09G206300 Gossypium hirsutum
Gohir.A10G127700 Gossypium hirsutum
Gohir.D09G199900 Gossypium hirsutum
Gohir.D10G138300 Gossypium hirsutum
Gorai.006G223600 Gossypium raimondii
Gorai.011G153400 Gossypium raimondii
GSVIVG01019374001 Vitis vinifera
GSVIVG01038274001 Vitis vinifera
GSVIVG01038275001 Vitis vinifera
HanXRQChr04g0120771 Helianthus annuus
HanXRQChr06g0170341 Helianthus annuus
Haze_11091 Corylus avellana
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla
HPP92_007573 Vanilla planifolia
HPP92_007574 Vanilla planifolia
Hund12292 Selenicereus undatus
Hund22666 Selenicereus undatus
Hund22692 Selenicereus undatus
Lalb_Chr01g0020651 Lupinus albus
Lalb_Chr03g0037991 Lupinus albus
Lj2A826G20 Lonicera japonica
Lj3g0005174 Lotus japonicus
Lj6g0016848 Lotus japonicus
Lju124A8T11 Lonicera japonica
Lsat_1_v5_gn_7_3921 Lactuca sativa
Manes.01G008800 Manihot esculenta
Mapoly0107s0040 Marchantia polymorpha
MBI05_g03438_MAGBIO Magnolia biondii
MBI15_g33460_MAGBIO Magnolia biondii
MBI15_g33461_MAGBIO Magnolia biondii
MD00G1145100 Malus domestica
MD02G1001200 Malus domestica
MD15G1141700 Malus domestica
Medtr1g040105 Medicago truncatula
MELO3C020408.2 Cucumis melo
MELO3C027379.2 Cucumis melo
Migut.N03006 Erythranthe guttata
MSTRG.24536 Avicennia marina
Nitab4.5_0000971g0090 Nicotiana tabacum
Nitab4.5_0001653g0120 Nicotiana tabacum
Nitab4.5_0003263g0060 Nicotiana tabacum
Nitab4.5_0006595g0030 Nicotiana tabacum
Nitab4.5_0006595g0040 Nicotiana tabacum
Nn1g09394 Nelumbo nucifera
Nn7g37414 Nelumbo nucifera
Oeu028194.1 Olea europaea
Os03g0815200 Oryza sativa ssp. japonica
Peaxi162Scf00156g00015 Petunia axillaris
Peaxi162Scf00344g00056 Petunia axillaris
PGR042G2645 Punica granatum
PGSC0003DMG400016168 Solanum tuberosum
PGSC0003DMG400023361 Solanum tuberosum
Phvul.006G222101 Phaseolus vulgaris
Phvul.007G281200 Phaseolus vulgaris
Potri.007G147300 Populus trichocarpa
Potri.017G000300 Populus trichocarpa
Pp3c10_24030 Physcomitrium patens
Pp3c24_960 Physcomitrium patens
PRCOL_00004214 Prasinoderma coloniale
Prupe.7G271500 Prunus persica
Psat6g101800 Pisum sativum
Psat6g114760 Pisum sativum
PSO339G3074 Papaver somniferum
PSO384G1169 Papaver somniferum
QL10p065198 Quercus lobata
RcHm_v2.0_Chr1g0319671 Rosa chinensis
RcHm_v2.0_Chr2g0084261 Rosa chinensis
Rhsim09G0000900 Rhododendron simsii
Sabra17G0005200 Salix brachista
SalBow3G3990 Salvia bowleyana
SalBow3G4227 Salvia bowleyana
SalBow6G1509 Salvia bowleyana
Sc19g0002470 Simmondsia chinensis
Sc25g0002280 Simmondsia chinensis
Sed0018493 Sechium edule
Sed0024427 Sechium edule
SEGI_02109 Sequoiadendron giganteum
SEGI_28465 Sequoiadendron giganteum
SEGI_40039 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06250 Striga asiatica
SGA_v2.0_scaffold19G08917 Striga asiatica
SGA_v2.0_scaffold25G11024 Striga asiatica
SMO200G0039 Selaginella moellendorffii
SMO367G0955 Selaginella moellendorffii
Solyc05g055730.4 Solanum lycopersicum
Solyc11g008870.2 Solanum lycopersicum
Sopen05g034140 Solanum pennellii
Sopen11g004650 Solanum pennellii
Sp4g26240 Schrenkiella parvula
Sp5g03210 Schrenkiella parvula
TAR362G0403 Trochodendron aralioides
TAR633G0285 Trochodendron aralioides
THA.LOC104802525 Tarenaya hassleriana
THA.LOC104804412 Tarenaya hassleriana
THA.LOC104823108 Tarenaya hassleriana
Thecc.04G195400 Theobroma cacao
Thhalv10001367m.g Eutrema salsugineum
Thhalv10005854m.g Eutrema salsugineum
TPR.G30222 Trifolium pratense
TWI15G1037 Tripterygium wilfordii
unitig_27.g25139 Utricularia gibba
vmacro00737 Vaccinium macrocarpon
VMungo0464G1907 Vigna mungo
VMungo0647G2577 Vigna mungo
Zm00001eb062180 Zea mays
Zm00001eb212100 Zea mays
Zm00001eb440700 Zea mays
Zm00001eb440710 Zea mays

User provided reference genes

Program Settings