Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39610 Brassica napus
A03p38600 Brassica napus
A05p17720 Brassica napus
A06p00490 Brassica napus
Aa31LG8G1220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2057 Anthoceros agrestis
Actinidia21785 Actinidia chinensis
Actinidia21786 Actinidia chinensis
Actinidia26688 Actinidia chinensis
Actinidia28160 Actinidia chinensis
Actinidia32174 Actinidia chinensis
Actinidia32175 Actinidia chinensis
Actinidia39089 Actinidia chinensis
Ah.01g020820 Amaranthus hybridus
AL1G62890 Arabidopsis lyrata
AL3G26210 Arabidopsis lyrata
Aqoxy7G01099 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.62L32R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7TGU71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9YVIH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THNB81 Arachis hypogaea
AT1G54170 Arabidopsis thaliana
AT3G14010 Arabidopsis thaliana
ATR0724G004 Amborella trichopoda
ATR0724G080 Amborella trichopoda
Atru.chr1.3900 Acer truncatum
AUR62011561 Chenopodium quinoa
AUR62016380 Chenopodium quinoa
BcaB02g10857 Brassica carinata
BcaB04g18816 Brassica carinata
BcaB06g25410 Brassica carinata
BcaB07g33253 Brassica carinata
BcaB07g33254 Brassica carinata
BcaC01g03960 Brassica carinata
BcaC08g43597 Brassica carinata
BcaC08g44167 Brassica carinata
BcaNung02191 Brassica carinata
BcaNung04893 Brassica carinata
BcaNung06450 Brassica carinata
BolC1t05006H Brassica oleracea
BolC3t16936H Brassica oleracea
BolC6t36068H Brassica oleracea
BolC6t36757H Brassica oleracea
BraA01t04001Z Brassica rapa
BraA03t13007Z Brassica rapa
BraA05t20663Z Brassica rapa
BraA06t23264Z Brassica rapa
C01p50550 Brassica napus
C03p46710 Brassica napus
C06p09950 Brassica napus
C06p15680 Brassica napus
CAN.G862.25 Capsicum annuum
CANSAT56G4312 Cannabis sativa
CARHR044520 Cardamine hirsuta
CARHR088820 Cardamine hirsuta
Carub.0001s4341 Capsella rubella
Carub.0003s1359 Capsella rubella
Ca_01232_v3 Cicer arietinum L.
Ca_01233_v3 Cicer arietinum L.
Ca_05015_v3 Cicer arietinum L.
CBR_g52348 Chara braunii
CDE06G0734 Ceratophyllum demersum
CDE07G0771 Ceratophyllum demersum
Cfa003546 Carpinus fangiana
Cfa022519 Carpinus fangiana
Ciclev10025086m.g Citrus clementina
CiPaw.01G221000 Carya illinoinensis
CiPaw.02G137000 Carya illinoinensis
ClCG07G013970 Citrullus lanatus
COL.COLO4_30782 Corchorus olitorius
Cpa.g.sc25.97 Carica papaya
Cre01.g063997 Chlamydomonas reinhardtii
CsaV3_3G043570 Cucumis sativus L.
CSS0012837 Camellia sinensis var. sinensis
CSS0016093 Camellia sinensis var. sinensis
DCAR_007631 Daucus carota
DCAR_016132 Daucus carota
Dinv04023 Davidia involucrata
Dinv37877 Davidia involucrata
Duzib192G0343 Durio zibethinus
Duzib235G0409 Durio zibethinus
ECA234G2908 Erigeron canadensis
EL10Ac9g21941 Beta vulgaris
Eucgr.F03170 Eucalyptus grandis
FAN02G3680 Fragaria x ananassa
FAN05G2950 Fragaria x ananassa
FAN09G4047 Fragaria x ananassa
FAN14G0986 Fragaria x ananassa
FvH4_6g34380 Fragaria vesca
Glyma.07G036300 Glycine max
Glyma.13G346900 Glycine max
Glyma.15G027500 Glycine max
Glyma.16G005700 Glycine max
Gohir.A05G406400 Gossypium hirsutum
Gohir.A06G192700 Gossypium hirsutum
Gohir.A10G052600 Gossypium hirsutum
Gohir.D04G009200 Gossypium hirsutum
Gohir.D06G200600 Gossypium hirsutum
Gohir.D10G054400 Gossypium hirsutum
Gorai.010G234100 Gossypium raimondii
Gorai.011G057800 Gossypium raimondii
Gorai.012G011100 Gossypium raimondii
GSVIVG01016786001 Vitis vinifera
HanXRQChr09g0276711 Helianthus annuus
HanXRQChr10g0312291 Helianthus annuus
HanXRQChr12g0360461 Helianthus annuus
Haze_16008 Corylus avellana
Hma1.2p1_0165F.1_g073340 Hydrangea macrophylla
Hma1.2p1_0291F.1_g115240 Hydrangea macrophylla
Hma1.2p1_0496F.1_g166130 Hydrangea macrophylla
Hma1.2p1_0695F.1_g204470 Hydrangea macrophylla
HPP92_023800 Vanilla planifolia
Hund00484 Selenicereus undatus
Hund06581 Selenicereus undatus
Hund14580 Selenicereus undatus
Lalb_Chr14g0372621 Lupinus albus
Lalb_Chr22g0352001 Lupinus albus
Lalb_Chr24g0396621 Lupinus albus
Lj3g0017349 Lotus japonicus
Lj3g0018176 Lotus japonicus
Lj5C39G2 Lonicera japonica
Lj9A522G71 Lonicera japonica
Lsat_1_v5_gn_4_93821 Lactuca sativa
Lsat_1_v5_gn_5_135681 Lactuca sativa
Manes.04G142700 Manihot esculenta
Manes.11G022200 Manihot esculenta
Mapoly0009s0229 Marchantia polymorpha
MBI13_g11371_MAGBIO Magnolia biondii
MCO08G232 Micromonas commoda
MD09G1186100 Malus domestica
MD17G1171000 Malus domestica
Medtr2g099480 Medicago truncatula
Medtr8g019560 Medicago truncatula
MELO3C025813.2 Cucumis melo
Migut.D00945 Erythranthe guttata
MSTRG.4785 Avicennia marina
MSTRG.9512 Avicennia marina
Nitab4.5_0002072g0120 Nicotiana tabacum
Nitab4.5_0002795g0110 Nicotiana tabacum
Nitab4.5_0002879g0040 Nicotiana tabacum
Nitab4.5_0011707g0020 Nicotiana tabacum
Nn6g35582 Nelumbo nucifera
Nn8g38728 Nelumbo nucifera
Oeu058715.1 Olea europaea
Os02g0480900 Oryza sativa ssp. japonica
Peaxi162Scf00038g01820 Petunia axillaris
Peaxi162Scf00207g01431 Petunia axillaris
Peaxi162Scf00207g01432 Petunia axillaris
PGR102G1386 Punica granatum
PGSC0003DMG400004888 Solanum tuberosum
Phvul.005G156000 Phaseolus vulgaris
Phvul.010G133101 Phaseolus vulgaris
Potri.001G171100 Populus trichocarpa
Potri.003G063000 Populus trichocarpa
Pp3c1_22620 Physcomitrium patens
Pp3c2_16780 Physcomitrium patens
PRCOL_00001567 Prasinoderma coloniale
Prupe.7G067500 Prunus persica
Psat4g183560 Pisum sativum
Psat5g290880 Pisum sativum
PSO063G5495 Papaver somniferum
PSO210G5765 Papaver somniferum
PSO421G0240 Papaver somniferum
RcHm_v2.0_Chr2g0110201 Rosa chinensis
RcHm_v2.0_Chr2g0144721 Rosa chinensis
Rhsim08G0237100 Rhododendron simsii
Rhsim12G0208800 Rhododendron simsii
Rhsim12G0208900 Rhododendron simsii
Sabra01G0140200 Salix brachista
Sabra03G0036700 Salix brachista
SalBow5G2704 Salvia bowleyana
SalBow6G2321 Salvia bowleyana
SalBow7G3930 Salvia bowleyana
Sc10g0005710 Simmondsia chinensis
Sed0005467 Sechium edule
Sed0027854 Sechium edule
SEGI_12050 Sequoiadendron giganteum
SEGI_19897 Sequoiadendron giganteum
SEGI_20749 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02059 Striga asiatica
SGA_v2.0_scaffold68G22885 Striga asiatica
SHI10620 Sapria himalayana
SHI10621 Sapria himalayana
SMO112G0047 Selaginella moellendorffii
SMO364G0079 Selaginella moellendorffii
Solyc03g121950.3 Solanum lycopersicum
Solyc06g062860.4 Solanum lycopersicum
Sopen03g040770 Solanum pennellii
Sopen06g022320 Solanum pennellii
Sp1g40620 Schrenkiella parvula
Sp3g12260 Schrenkiella parvula
TAR383G0203 Trochodendron aralioides
TAR626G1385 Trochodendron aralioides
THA.LOC104810365 Tarenaya hassleriana
THA.LOC104815625 Tarenaya hassleriana
THA.LOC104822779 Tarenaya hassleriana
Thecc.06G117700 Theobroma cacao
Thhalv10011331m.g Eutrema salsugineum
Thhalv10020519m.g Eutrema salsugineum
TPR.G16437 Trifolium pratense
TPR.G30025 Trifolium pratense
TPR.G6601 Trifolium pratense
TWI31G0664 Tripterygium wilfordii
TWI79G0895 Tripterygium wilfordii
unitig_22.g6013 Utricularia gibba
unitig_8.g3564 Utricularia gibba
vmacro17050 Vaccinium macrocarpon
vmacro22213 Vaccinium macrocarpon
VMungo1080G0053 Vigna mungo
Zm00001eb202950 Zea mays
Zm00001eb241130 Zea mays

User provided reference genes

Program Settings