Gene: Sopen03g040770

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g040770
  • Transcript Identifier Sopen03g040770.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 74540103-74549713 : negative

Gene Family Information

  • ID HOM05D003244
  • #Genes/#Species 211/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g040770.1

Descriptions

  • Description hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (Saccharomyces cerevisiae) | weak similarity to ataxin-2 related protein (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2. | CTC-interacting domain 4 (CID4) | FUNCTIONS IN: protein binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: LsmAD domain , Ataxin-2, C-terminal | BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G14010
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025852 Ataxin 2, SM domain
IPR009604 LsmAD domain
IPR045117 Ataxin2-like
Mapman id Description
35.1 not assigned.annotated