Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p28110 Brassica napus
A07p42630 Brassica napus
A08p28960 Brassica napus
Aa31LG4G7070 Aethionema arabicum
Aa31LG7G5480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4116 Anthoceros agrestis
Actinidia15183 Actinidia chinensis
Actinidia25629 Actinidia chinensis
Actinidia29502 Actinidia chinensis
Ah.05g169240 Amaranthus hybridus
AL1G34520 Arabidopsis lyrata
AL2G37170 Arabidopsis lyrata
Aqoxy6G00333 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H9I2X3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJLN12 Arachis hypogaea
AT1G21410 Arabidopsis thaliana
AT1G77000 Arabidopsis thaliana
ATR0584G015 Amborella trichopoda
Atru.chr13.1648 Acer truncatum
AUR62007671 Chenopodium quinoa
AUR62013463 Chenopodium quinoa
BcaB02g07094 Brassica carinata
BcaB03g12816 Brassica carinata
BcaB06g26954 Brassica carinata
BcaC01g01597 Brassica carinata
BcaC07g39100 Brassica carinata
BcaC07g39118 Brassica carinata
BcaC07g39119 Brassica carinata
BcaC08g47203 Brassica carinata
BcaNung04680 Brassica carinata
BcaNung04682 Brassica carinata
BcaNung04683 Brassica carinata
BolC6t38282H Brassica oleracea
BolC6t40144H Brassica oleracea
BolC8t49722H Brassica oleracea
BolC8t49742H Brassica oleracea
BraA07t30455Z Brassica rapa
BraA07t31785Z Brassica rapa
BraA08t34829Z Brassica rapa
C06p31540 Brassica napus
C06p51220 Brassica napus
C08p20820 Brassica napus
C08p21050 Brassica napus
C08p21070 Brassica napus
CAN.G1540.1 Capsicum annuum
CAN.G402.3 Capsicum annuum
CAN.G4251.1 Capsicum annuum
CAN.G46.5 Capsicum annuum
CANSAT21G2438 Cannabis sativa
CARHR021800 Cardamine hirsuta
CARHR070540 Cardamine hirsuta
Carub.0001s2083 Capsella rubella
Carub.0002s2392 Capsella rubella
Ca_11513_v3 Cicer arietinum L.
Ca_12653_v3 Cicer arietinum L.
Ca_12670_v3 Cicer arietinum L.
Ca_16639_v3 Cicer arietinum L.
Ca_23406_v3 Cicer arietinum L.
Ca_27639_v3 Cicer arietinum L.
CBR_g791 Chara braunii
Cc10_g13230 Coffea canephora
CDE04G2857 Ceratophyllum demersum
CDE12G0899 Ceratophyllum demersum
Cfa018393 Carpinus fangiana
Cfa018394 Carpinus fangiana
Ciclev10001527m.g Citrus clementina
CiPaw.15G024000 Carya illinoinensis
CiPaw.16G019300 Carya illinoinensis
ClCG08G006300 Citrullus lanatus
COL.COLO4_35492 Corchorus olitorius
Cpa.g.sc26.74 Carica papaya
CsaV3_6G031140 Cucumis sativus L.
CSS0014299 Camellia sinensis var. sinensis
DCAR_001093 Daucus carota
DCAR_010277 Daucus carota
Dinv25778 Davidia involucrata
Dinv41147 Davidia involucrata
Duzib041G0121 Durio zibethinus
Duzib093G1881 Durio zibethinus
Duzib116G0834 Durio zibethinus
ECA232G3205 Erigeron canadensis
ECA246G0520 Erigeron canadensis
EL10Ac1g01412 Beta vulgaris
Eucgr.F02761 Eucalyptus grandis
FAN15G3584 Fragaria x ananassa
FAN20G2537 Fragaria x ananassa
FAN24G2686 Fragaria x ananassa
FAN27G0949 Fragaria x ananassa
FvH4_2g15180 Fragaria vesca
Glyma.04G242700 Glycine max
Glyma.06G120600 Glycine max
Glyma.11G178504 Glycine max
Glyma.13G036600 Glycine max
Glyma.14G118200 Glycine max
Gohir.A02G068700 Gossypium hirsutum
Gohir.A02G109500 Gossypium hirsutum
Gohir.A05G240800 Gossypium hirsutum
Gohir.D02G075200 Gossypium hirsutum
Gohir.D03G062300 Gossypium hirsutum
Gohir.D05G158266 Gossypium hirsutum
Gohir.D05G242000 Gossypium hirsutum
Gohir.D06G114300 Gossypium hirsutum
Gorai.005G084600 Gossypium raimondii
Gorai.006G096600 Gossypium raimondii
Gorai.009G163000 Gossypium raimondii
Gorai.009G251400 Gossypium raimondii
Gorai.010G130600 Gossypium raimondii
Gorai.013G107300 Gossypium raimondii
GSVIVG01009981001 Vitis vinifera
HanXRQChr02g0050061 Helianthus annuus
HanXRQChr04g0109701 Helianthus annuus
HanXRQChr04g0109711 Helianthus annuus
HanXRQChr04g0109731 Helianthus annuus
HanXRQChr04g0109741 Helianthus annuus
HanXRQChr05g0160471 Helianthus annuus
HanXRQChr08g0232401 Helianthus annuus
HanXRQChr09g0257191 Helianthus annuus
HanXRQChr10g0299651 Helianthus annuus
HanXRQChr10g0309301 Helianthus annuus
HanXRQChr12g0382851 Helianthus annuus
Haze_17675 Corylus avellana
Hma1.2p1_0107F.1_g051260 Hydrangea macrophylla
Hma1.2p1_0642F.1_g194370 Hydrangea macrophylla
HPP92_006892 Vanilla planifolia
HPP92_025185 Vanilla planifolia
Hund04717 Selenicereus undatus
Hund17376 Selenicereus undatus
Hund26599 Selenicereus undatus
Hund26760 Selenicereus undatus
Lalb_Chr08g0240891 Lupinus albus
Lalb_Chr11g0066321 Lupinus albus
Lj1g0004319 Lotus japonicus
Lj1g0023277 Lotus japonicus
Lj7A357T26 Lonicera japonica
Lsat_1_v5_gn_1_9360 Lactuca sativa
Lsat_1_v5_gn_6_97240 Lactuca sativa
Manes.02G172600 Manihot esculenta
Manes.18G085100 Manihot esculenta
Mapoly0008s0157 Marchantia polymorpha
MBI06_g27445_MAGBIO Magnolia biondii
MD05G1010400 Malus domestica
MD10G1009000 Malus domestica
Medtr1g029500 Medicago truncatula
Medtr3g088895 Medicago truncatula
MELO3C008429.2 Cucumis melo
Migut.C01093 Erythranthe guttata
MSTRG.1390 Avicennia marina
MSTRG.25343 Avicennia marina
Nitab4.5_0000174g0050 Nicotiana tabacum
Nitab4.5_0003622g0030 Nicotiana tabacum
Nn1g06283 Nelumbo nucifera
Nn5g28514 Nelumbo nucifera
Oeu001554.1 Olea europaea
Oeu002390.1 Olea europaea
Oeu037952.1 Olea europaea
Oeu045988.1 Olea europaea
Os01g0881900 Oryza sativa ssp. japonica
Os05g0425700 Oryza sativa ssp. japonica
Peaxi162Scf00066g01516 Petunia axillaris
PGR042G1914 Punica granatum
PGSC0003DMG400024857 Solanum tuberosum
Phvul.001G065400 Phaseolus vulgaris
Phvul.009G133200 Phaseolus vulgaris
Potri.002G074700 Populus trichocarpa
Potri.005G185700 Populus trichocarpa
Pp3c11_6360 Physcomitrium patens
Pp3c12_1700 Physcomitrium patens
Pp3c2_31590 Physcomitrium patens
Prupe.8G012800 Prunus persica
Psat5g082440 Pisum sativum
Psat6g039800 Pisum sativum
Psat6g071440 Pisum sativum
PSO170G2982 Papaver somniferum
PSO528G0160 Papaver somniferum
QL09p029494 Quercus lobata
RcHm_v2.0_Chr6g0277841 Rosa chinensis
Rhsim11G0075000 Rhododendron simsii
Sabra02G0058200 Salix brachista
Sabra05G0141900 Salix brachista
SalBow6G3961 Salvia bowleyana
SalBow7G2939 Salvia bowleyana
Sc15g0007480 Simmondsia chinensis
Sed0017540 Sechium edule
Sed0024660 Sechium edule
SEGI_09933 Sequoiadendron giganteum
SEGI_39374 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08690 Striga asiatica
SGA_v2.0_scaffold48G17925 Striga asiatica
SMO259G0006 Selaginella moellendorffii
Solyc04g063380.3 Solanum lycopersicum
Sopen04g026300 Solanum pennellii
Sp1g18960 Schrenkiella parvula
Sp5g32170 Schrenkiella parvula
TAR202G0001 Trochodendron aralioides
TAR381G1399 Trochodendron aralioides
TAR628G1621 Trochodendron aralioides
THA.LOC104804863 Tarenaya hassleriana
THA.LOC104810056 Tarenaya hassleriana
THA.LOC104812061 Tarenaya hassleriana
Thecc.08G138500 Theobroma cacao
Thhalv10008012m.g Eutrema salsugineum
Thhalv10018746m.g Eutrema salsugineum
TPR.G25621 Trifolium pratense
TPR.G33350 Trifolium pratense
TWI34G0021 Tripterygium wilfordii
unitig_0.g2110 Utricularia gibba
unitig_82.g27082 Utricularia gibba
vmacro00878 Vaccinium macrocarpon
VMungo1309G2691 Vigna mungo
Zm00001eb145730 Zea mays
Zm00001eb288390 Zea mays

User provided reference genes

Program Settings