Gene: Pp3c12_1700
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c12_1700
- Transcript Identifier Pp3c12_1700V3.2
- Gene Type Coding gene
- Location Chr12 : 1570510-1573249 : negative
Gene Family Information
- ID HOM05D003243
- #Genes/#Species 211/96
- Phylogenetic origin
- ID ORTHO05D003717
- #Genes/#Species 208/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c12_1700V3.2
- pacid 32973654
- alias Phpat.012G004200
- alias Phypa_136317
- alias Pp1s128_42V6
- uniprot A0A2K1JP68
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031146 | IBA | GOA Database | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | |
GO:0010286 | ISO | PLAZA Integrative Orthology | heat acclimation | AT1G77000 |
GO:0051781 | ISO | PLAZA Integrative Orthology | positive regulation of cell division | AT1G21410 |
GO:0071365 | ISO | PLAZA Integrative Orthology | cellular response to auxin stimulus | AT1G21410 |
GO:1901332 | ISO | PLAZA Integrative Orthology | negative regulation of lateral root development | AT1G77000 |
GO:0051603 | ISO | PLAZA Integrative Orthology | proteolysis involved in cellular protein catabolic process | AT1G77000 |
GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT1G77000 |
GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT1G21410 |
GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | AT1G21410 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT1G21410 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0019005 | IBA | GOA Database | SCF ubiquitin ligase complex | |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G21410 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.8.1.4.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX) |