Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p41940 Brassica napus
A10p20430 Brassica napus
Aa31LG5G16550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2160 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2162 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2320 Anthoceros agrestis
Actinidia23501 Actinidia chinensis
Ah.10g034980 Amaranthus hybridus
AL2G12120 Arabidopsis lyrata
AL6G30650 Arabidopsis lyrata
Aqoxy2G03298 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4929ND Arachis hypogaea
AT3G06060 Arabidopsis thaliana
AT5G19200 Arabidopsis thaliana
ATR0626G169 Amborella trichopoda
Atru.chr4.2535 Acer truncatum
AUR62009269 Chenopodium quinoa
AUR62042438 Chenopodium quinoa
BcaB08g36592 Brassica carinata
BcaB08g36593 Brassica carinata
BcaC04g18588 Brassica carinata
BcaC05g30061 Brassica carinata
BolC5t34779H Brassica oleracea
BolC9t58571H Brassica oleracea
BraA05t22916Z Brassica rapa
C03p41950 Brassica napus
C05p61190 Brassica napus
C09p57040 Brassica napus
CAN.G851.10 Capsicum annuum
CANSAT56G0357 Cannabis sativa
CARHR080570 Cardamine hirsuta
Carub.0003s0550 Capsella rubella
Carub.0006s1753 Capsella rubella
Ca_00632_v3 Cicer arietinum L.
CBR_g32182 Chara braunii
Cc03_g03280 Coffea canephora
Cfa015952 Carpinus fangiana
Cfa025282 Carpinus fangiana
Ciclev10005413m.g Citrus clementina
CiPaw.01G161600 Carya illinoinensis
CiPaw.02G093600 Carya illinoinensis
ClCG05G005330 Citrullus lanatus
ClCG05G011190 Citrullus lanatus
COL.COLO4_00130 Corchorus olitorius
COL.COLO4_05384 Corchorus olitorius
COL.COLO4_05385 Corchorus olitorius
COL.COLO4_08743 Corchorus olitorius
COL.COLO4_20849 Corchorus olitorius
COL.COLO4_20850 Corchorus olitorius
COL.COLO4_20855 Corchorus olitorius
COL.COLO4_26632 Corchorus olitorius
Cpa.g.sc125.28 Carica papaya
Cre17.g702750 Chlamydomonas reinhardtii
CsaV3_3G013580 Cucumis sativus L.
CSS0018012 Camellia sinensis var. sinensis
DCAR_024537 Daucus carota
DCAR_027180 Daucus carota
Dinv38409 Davidia involucrata
Dinv44493 Davidia involucrata
Duzib114G0214 Durio zibethinus
Duzib147G0300 Durio zibethinus
Duzib147G0392 Durio zibethinus
Duzib187G1207 Durio zibethinus
Duzib199G0002 Durio zibethinus
ECA248G2845 Erigeron canadensis
EL10Ac2g04006 Beta vulgaris
Eucgr.B01113 Eucalyptus grandis
Eucgr.B01114 Eucalyptus grandis
Eucgr.B01115 Eucalyptus grandis
FAN04G3165 Fragaria x ananassa
FAN08G2949 Fragaria x ananassa
FAN12G2674 Fragaria x ananassa
FvH4_4g14820 Fragaria vesca
Glyma.12G174300 Glycine max
Glyma.13G207200 Glycine max
Glyma.15G105400 Glycine max
Gohir.A05G230300 Gossypium hirsutum
Gohir.A05G230350 Gossypium hirsutum
Gohir.A05G340100 Gossypium hirsutum
Gohir.D04G078600 Gossypium hirsutum
Gohir.D05G232700 Gossypium hirsutum
Gohir.D05G232800 Gossypium hirsutum
Gorai.009G240900 Gossypium raimondii
Gorai.012G088500 Gossypium raimondii
Gorai.013G194000 Gossypium raimondii
Gorai.N027600 Gossypium raimondii
GSVIVG01017907001 Vitis vinifera
HanXRQChr01g0028881 Helianthus annuus
HanXRQChr10g0286501 Helianthus annuus
HanXRQChr11g0351171 Helianthus annuus
HanXRQChr11g0351181 Helianthus annuus
HanXRQChr11g0351371 Helianthus annuus
Haze_00167 Corylus avellana
Haze_00171 Corylus avellana
Haze_00533 Corylus avellana
Haze_00534 Corylus avellana
Hma1.2p1_0447F.1_g154750 Hydrangea macrophylla
Hma1.2p1_0995F.1_g245780 Hydrangea macrophylla
HPP92_015138 Vanilla planifolia
Hund19505 Selenicereus undatus
Hund19506 Selenicereus undatus
Lalb_Chr15g0087401 Lupinus albus
Lalb_Chr18g0056161 Lupinus albus
Lalb_Chr20g0118481 Lupinus albus
Lalb_Chr20g0118491 Lupinus albus
Lalb_Chr20g0118501 Lupinus albus
Lj3P716T36 Lonicera japonica
Lj3P750T44 Lonicera japonica
Lj6g0023183 Lotus japonicus
Lsat_1_v5_gn_1_50180 Lactuca sativa
Lsat_1_v5_gn_4_32481 Lactuca sativa
Manes.08G075500 Manihot esculenta
Mapoly0005s0172 Marchantia polymorpha
Mapoly0079s0060 Marchantia polymorpha
MBI17_g13566_MAGBIO Magnolia biondii
MBI19_g44204_MAGBIO Magnolia biondii
MD13G1185700 Malus domestica
Medtr0103s0010 Medicago truncatula
Medtr2g022600 Medicago truncatula
Medtr3g098750 Medicago truncatula
Medtr6g009130 Medicago truncatula
MELO3C006553.2 Cucumis melo
Migut.G00306 Erythranthe guttata
Migut.N00158 Erythranthe guttata
MSTRG.10005 Avicennia marina
MSTRG.21834 Avicennia marina
Nitab4.5_0000321g0010 Nicotiana tabacum
Nitab4.5_0006333g0030 Nicotiana tabacum
Nitab4.5_0006639g0010 Nicotiana tabacum
Nitab4.5_0008223g0010 Nicotiana tabacum
Nitab4.5_0010073g0020 Nicotiana tabacum
Nn4g26225 Nelumbo nucifera
Oeu030324.1 Olea europaea
Os02g0701900 Oryza sativa ssp. japonica
Peaxi162Scf00069g01432 Petunia axillaris
Peaxi162Scf00769g00032 Petunia axillaris
PGR142G1056 Punica granatum
PGSC0003DMG401004220 Solanum tuberosum
PGSC0003DMG401011813 Solanum tuberosum
PGSC0003DMG402004220 Solanum tuberosum
Phvul.006G152000 Phaseolus vulgaris
Potri.010G191800 Populus trichocarpa
Pp3c10_24980 Physcomitrium patens
Pp3c22_10520 Physcomitrium patens
Pp3c22_14290 Physcomitrium patens
Pp3c23_10340 Physcomitrium patens
Pp3c24_3340 Physcomitrium patens
Prupe.6G171900 Prunus persica
Prupe.6G197600 Prunus persica
Psat1g182720 Pisum sativum
PSO017G3704 Papaver somniferum
PSO210G7458 Papaver somniferum
PSO478G0559 Papaver somniferum
PSO832G4100 Papaver somniferum
QL06p003747 Quercus lobata
RcHm_v2.0_Chr4g0417501 Rosa chinensis
RcHm_v2.0_Chr6g0272751 Rosa chinensis
RcHm_v2.0_Chr6g0272831 Rosa chinensis
RcHm_v2.0_Chr6g0272851 Rosa chinensis
RcHm_v2.0_Chr6g0272861 Rosa chinensis
RcHm_v2.0_Chr6g0272881 Rosa chinensis
Rhsim02G0180400 Rhododendron simsii
Rhsim04G0203500 Rhododendron simsii
Rhsim10G0177500 Rhododendron simsii
Sabra10G0147500 Salix brachista
Sabra16G0185700 Salix brachista
SalBow2G2662 Salvia bowleyana
Sc13g0004130 Simmondsia chinensis
Sed0017985 Sechium edule
Sed0022772 Sechium edule
SEGI_04804 Sequoiadendron giganteum
SEGI_05055 Sequoiadendron giganteum
SEGI_05385 Sequoiadendron giganteum
SEGI_06569 Sequoiadendron giganteum
SEGI_08494 Sequoiadendron giganteum
SEGI_08502 Sequoiadendron giganteum
SEGI_08716 Sequoiadendron giganteum
SEGI_14042 Sequoiadendron giganteum
SEGI_14122 Sequoiadendron giganteum
SEGI_14847 Sequoiadendron giganteum
SEGI_18906 Sequoiadendron giganteum
SEGI_20999 Sequoiadendron giganteum
SEGI_22279 Sequoiadendron giganteum
SEGI_22901 Sequoiadendron giganteum
SEGI_23586 Sequoiadendron giganteum
SEGI_25622 Sequoiadendron giganteum
SEGI_34419 Sequoiadendron giganteum
SEGI_35775 Sequoiadendron giganteum
SGA_v2.0_scaffold166G38366 Striga asiatica
SGA_v2.0_scaffold23G10040 Striga asiatica
SGA_v2.0_scaffold39G15309 Striga asiatica
SMO361G0534 Selaginella moellendorffii
SMO361G0773 Selaginella moellendorffii
Solyc06g054330.3 Solanum lycopersicum
Sopen01g016440 Solanum pennellii
Sopen06g019440 Solanum pennellii
Sp3g05010 Schrenkiella parvula
Sp6g25180 Schrenkiella parvula
TAR362G0648 Trochodendron aralioides
TAR633G2542 Trochodendron aralioides
THA.LOC104818806 Tarenaya hassleriana
THA.LOC104822305 Tarenaya hassleriana
Thecc.04G030700 Theobroma cacao
Thecc.04G224800 Theobroma cacao
Thecc.04G224900 Theobroma cacao
Thhalv10014360m.g Eutrema salsugineum
Thhalv10021124m.g Eutrema salsugineum
TPR.G7640 Trifolium pratense
TWI53G0183 Tripterygium wilfordii
VMungo0540G1138 Vigna mungo
Zm00001eb188220 Zea mays
Zm00001eb251870 Zea mays

User provided reference genes

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