Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33360 Brassica napus
A02p40880 Brassica napus
A09p06850 Brassica napus
A09p59140 Brassica napus
Aa31LG11G3010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1261 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_290.3 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_297.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1379 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1511 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2085 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2673 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3036 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.601 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_94.6 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_94.8 Anthoceros agrestis
Actinidia19949 Actinidia chinensis
Actinidia19950 Actinidia chinensis
Actinidia20597 Actinidia chinensis
Actinidia26635 Actinidia chinensis
Actinidia26636 Actinidia chinensis
Actinidia28935 Actinidia chinensis
AL6G34910 Arabidopsis lyrata
Aqoxy4G02048 Aquilegia oxysepala
Aqoxy5G02750 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KDQ8ZI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MF06QU Arachis hypogaea
AT5G23630 Arabidopsis thaliana
ATR0064G028 Amborella trichopoda
ATR0064G088 Amborella trichopoda
Atru.chr8.881 Acer truncatum
AUR62008992 Chenopodium quinoa
AUR62023309 Chenopodium quinoa
BcaB04g19855 Brassica carinata
BcaB07g29887 Brassica carinata
BcaC03g18022 Brassica carinata
BcaC04g23507 Brassica carinata
BcaC06g36382 Brassica carinata
BcaNung01853 Brassica carinata
BcaNung05205 Brassica carinata
BcaNung05206 Brassica carinata
BolC2t12130H Brassica oleracea
BolC7t40871H Brassica oleracea
BolC9t53674H Brassica oleracea
BraA02t09034Z Brassica rapa
BraA03t12952Z Brassica rapa
BraA08t32416Z Brassica rapa
BraA09t36331Z Brassica rapa
C02p60780 Brassica napus
C07p43940 Brassica napus
C09p07570 Brassica napus
CAN.G1211.4 Capsicum annuum
CAN.G134.46 Capsicum annuum
CANSAT54G2149 Cannabis sativa
CARHR189920 Cardamine hirsuta
CARHR190170 Cardamine hirsuta
Carub.0006s2139 Capsella rubella
Ca_17035_v3 Cicer arietinum L.
CBR_g48843 Chara braunii
Cc06_g20680 Coffea canephora
Cc11_g05040 Coffea canephora
CDE02G1396 Ceratophyllum demersum
CDE04G0779 Ceratophyllum demersum
CDE04G2131 Ceratophyllum demersum
Cfa020911 Carpinus fangiana
Cfa024590 Carpinus fangiana
Cfa027207 Carpinus fangiana
Ciclev10018565m.g Citrus clementina
CiPaw.15G184200 Carya illinoinensis
CiPaw.16G118900 Carya illinoinensis
ClCG02G016210 Citrullus lanatus
COL.COLO4_04896 Corchorus olitorius
Cpa.g.sc170.60 Carica papaya
Cpa.g.sc170.64 Carica papaya
Cre02.g093700 Chlamydomonas reinhardtii
Cre17.g744447 Chlamydomonas reinhardtii
CsaV3_2G004550 Cucumis sativus L.
CSS0030679 Camellia sinensis var. sinensis
DCAR_009034 Daucus carota
DCAR_010872 Daucus carota
DCAR_020438 Daucus carota
Dinv04531 Davidia involucrata
Dinv17906 Davidia involucrata
Dinv18129 Davidia involucrata
Duzib106G1784 Durio zibethinus
Duzib177G0522 Durio zibethinus
ECA232G4880 Erigeron canadensis
ECA238G2611 Erigeron canadensis
ECA238G3469 Erigeron canadensis
EL10Ac2g04575 Beta vulgaris
Eucgr.H05054 Eucalyptus grandis
FAN04G0579 Fragaria x ananassa
FAN08G3025 Fragaria x ananassa
FAN13G2597 Fragaria x ananassa
FAN18G2297 Fragaria x ananassa
FvH4_5g30560 Fragaria vesca
Glyma.04G204800 Glycine max
Glyma.06G160800 Glycine max
Gohir.A13G115100 Gossypium hirsutum
Gohir.D13G118000 Gossypium hirsutum
Gorai.013G132500 Gossypium raimondii
GSVIVG01000234001 Vitis vinifera
HanXRQChr09g0265231 Helianthus annuus
Haze_19344 Corylus avellana
Hma1.2p1_1945F.1_g308610 Hydrangea macrophylla
Hma1.2p1_1945F.1_g308620 Hydrangea macrophylla
HPP92_022123 Vanilla planifolia
HPP92_022135 Vanilla planifolia
Hund13720 Selenicereus undatus
Lalb_Chr08g0237721 Lupinus albus
Lalb_Chr11g0068881 Lupinus albus
Lj1g0018228 Lotus japonicus
Lj3A927G13 Lonicera japonica
Lsat_1_v5_gn_4_179580 Lactuca sativa
Lsat_1_v5_gn_8_130720 Lactuca sativa
Manes.17G018800 Manihot esculenta
Mapoly0002s0327 Marchantia polymorpha
Mapoly0013s0191 Marchantia polymorpha
Mapoly0047s0094 Marchantia polymorpha
Mapoly0047s0097 Marchantia polymorpha
Mapoly0047s0098 Marchantia polymorpha
Mapoly0155s0012 Marchantia polymorpha
MCO03G244 Micromonas commoda
MCO16G616 Micromonas commoda
MD08G1222500 Malus domestica
MD15G1415900 Malus domestica
Medtr3g097560 Medicago truncatula
MELO3C004336.2 Cucumis melo
Migut.N00792 Erythranthe guttata
MSTRG.297 Avicennia marina
MSTRG.8249 Avicennia marina
Nitab4.5_0002687g0120 Nicotiana tabacum
Nitab4.5_0006602g0010 Nicotiana tabacum
Nn3g20196 Nelumbo nucifera
Oeu024851.1 Olea europaea
Oeu024852.1 Olea europaea
Oeu044063.4 Olea europaea
Os05g0402800 Oryza sativa ssp. japonica
Peaxi162Scf00647g00521 Petunia axillaris
PGR031G3736 Punica granatum
PGSC0003DMG400027506 Solanum tuberosum
Phvul.009G158500 Phaseolus vulgaris
Potri.004G137100 Populus trichocarpa
Potri.T012200 Populus trichocarpa
Pp3c14_20920 Physcomitrium patens
Pp3c14_26380 Physcomitrium patens
Pp3c14_26389 Physcomitrium patens
Pp3c2_5380 Physcomitrium patens
Pp3c7_12140 Physcomitrium patens
PRCOL_00004888 Prasinoderma coloniale
PRCOL_00006825 Prasinoderma coloniale
Prupe.1G560300 Prunus persica
Psat0s7774g0080 Pisum sativum
Psat3g037800 Pisum sativum
Psat4g211520 Pisum sativum
Psat5g057040 Pisum sativum
Psat7g005320 Pisum sativum
PSO339G5522 Papaver somniferum
PSO384G3388 Papaver somniferum
QL04p009840 Quercus lobata
QL10p038436 Quercus lobata
RcHm_v2.0_Chr7g0225451 Rosa chinensis
Rhsim02G0071800 Rhododendron simsii
Sabra19G0000900 Salix brachista
Sabra19G0001800 Salix brachista
Sabra19G0010100 Salix brachista
Sabra19G0010200 Salix brachista
Sabra19G0010700 Salix brachista
Sabra19G0010800 Salix brachista
Sabra19G0010900 Salix brachista
SalBow4G1487 Salvia bowleyana
SalBow7G1183 Salvia bowleyana
SalBow7G2948 Salvia bowleyana
Sc09g0001160 Simmondsia chinensis
Sed0001545 Sechium edule
Sed0007652 Sechium edule
SEGI_06157 Sequoiadendron giganteum
SEGI_11553 Sequoiadendron giganteum
SEGI_29105 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01007 Striga asiatica
SGA_v2.0_scaffold5281G54621 Striga asiatica
SMO158G0002 Selaginella moellendorffii
SMO190G0002 Selaginella moellendorffii
SMO236G0068 Selaginella moellendorffii
SMO236G0094 Selaginella moellendorffii
SMO276G0045 Selaginella moellendorffii
SMO347G0424 Selaginella moellendorffii
Solyc01g096830.3 Solanum lycopersicum
Sopen01g040530 Solanum pennellii
Sopen01g040540 Solanum pennellii
Sp2g23580 Schrenkiella parvula
TAR544G0002 Trochodendron aralioides
TAR633G0290 Trochodendron aralioides
TAR633G0355 Trochodendron aralioides
TAR633G2269 Trochodendron aralioides
TAR636G0043 Trochodendron aralioides
TAR636G0413 Trochodendron aralioides
THA.LOC104800414 Tarenaya hassleriana
Thecc.05G191900 Theobroma cacao
Thhalv10003540m.g Eutrema salsugineum
Thhalv10027626m.g Eutrema salsugineum
TPR.G7796 Trifolium pratense
TWI31G0834 Tripterygium wilfordii
TWI75G0742 Tripterygium wilfordii
unitig_0.g1012 Utricularia gibba
vmacro06742 Vaccinium macrocarpon
vmacro18729 Vaccinium macrocarpon
VMungo0584G0001 Vigna mungo
VMungo1127G0078 Vigna mungo
VMungo1309G2105 Vigna mungo
Zm00001eb287640 Zea mays
Zm00001eb349830 Zea mays

User provided reference genes

Program Settings