Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13180 Brassica napus
A09p26090 Brassica napus
Aa31LG5G8910 Aethionema arabicum
Aa31LG5G8920 Aethionema arabicum
Aa31LG9G9680 Aethionema arabicum
Actinidia10706 Actinidia chinensis
Actinidia35317 Actinidia chinensis
Ah.06g183030 Amaranthus hybridus
AL1G67350 Arabidopsis lyrata
AL1G67370 Arabidopsis lyrata
AL6G48280 Arabidopsis lyrata
AL7G32020 Arabidopsis lyrata
Aqoxy4G02069 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2TAV4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2UU78P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4630L6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BRX1G6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C6RLDL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSI4TH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LTHE3G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P5VPT7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PSAJ1X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea
AT4G04790 Arabidopsis thaliana
AT4G21880 Arabidopsis thaliana
ATR0794G044 Amborella trichopoda
AUR62015646 Chenopodium quinoa
AUR62020553 Chenopodium quinoa
BcaB01g01838 Brassica carinata
BcaB05g23738 Brassica carinata
BcaC04g21326 Brassica carinata
BcaC09g51192 Brassica carinata
BcaC09g51195 Brassica carinata
BcaNung02254 Brassica carinata
BolC1t01542H Brassica oleracea
BolC9t56146H Brassica oleracea
BraA01t01262Z Brassica rapa
BraA09t38176Z Brassica rapa
C01p15880 Brassica napus
C09p33110 Brassica napus
CAN.G337.147 Capsicum annuum
CAN.G337.88 Capsicum annuum
CAN.G337.89 Capsicum annuum
CANSAT11G2707 Cannabis sativa
CARHR054770 Cardamine hirsuta
CARHR228590 Cardamine hirsuta
CARHR228640 Cardamine hirsuta
CARHR252740 Cardamine hirsuta
Carub.0006s3271 Capsella rubella
Carub.0007s1949 Capsella rubella
Ca_01752_v3 Cicer arietinum L.
Cc05_g13250 Coffea canephora
CDE12G0466 Ceratophyllum demersum
CDE12G0546 Ceratophyllum demersum
Cfa020414 Carpinus fangiana
Ciclev10008319m.g Citrus clementina
Ciclev10008519m.g Citrus clementina
Ciclev10008545m.g Citrus clementina
CiPaw.11G183800 Carya illinoinensis
ClCG05G014770 Citrullus lanatus
COL.COLO4_09572 Corchorus olitorius
Cpa.g.sc97.66 Carica papaya
Cpa.g.sc97.68 Carica papaya
CsaV3_3G022860 Cucumis sativus L.
CsaV3_UNG228980 Cucumis sativus L.
CsaV3_UNG228990 Cucumis sativus L.
CsaV3_UNG229000 Cucumis sativus L.
CSS0012105 Camellia sinensis var. sinensis
CSS0025638 Camellia sinensis var. sinensis
DCAR_008676 Daucus carota
DCAR_015959 Daucus carota
DCAR_032350 Daucus carota
Dinv22304 Davidia involucrata
Duzib213G0184 Durio zibethinus
Duzib213G0670 Durio zibethinus
Duzib268G0600 Durio zibethinus
ECA240G2036 Erigeron canadensis
ECA246G0280 Erigeron canadensis
EL10Ac4g07970 Beta vulgaris
Eucgr.F03427 Eucalyptus grandis
Eucgr.G00523 Eucalyptus grandis
Eucgr.H00088 Eucalyptus grandis
Eucgr.J00432 Eucalyptus grandis
FAN01G1176 Fragaria x ananassa
FAN03G0141 Fragaria x ananassa
FAN06G1056 Fragaria x ananassa
FAN07G0159 Fragaria x ananassa
FAN10G2257 Fragaria x ananassa
FAN11G0078 Fragaria x ananassa
FAN11G0113 Fragaria x ananassa
FAN11G0568 Fragaria x ananassa
FAN11G2546 Fragaria x ananassa
FAN11G2904 Fragaria x ananassa
FAN16G1316 Fragaria x ananassa
FAN16G3122 Fragaria x ananassa
FAN21G1934 Fragaria x ananassa
FAN21G2694 Fragaria x ananassa
FAN21G3709 Fragaria x ananassa
FAN25G3665 Fragaria x ananassa
FAN28G1104 Fragaria x ananassa
FvH4_3g21820 Fragaria vesca
FvH4_3g22610 Fragaria vesca
FvH4_3g41772 Fragaria vesca
FvH4_3g42340 Fragaria vesca
FvH4_3g42560 Fragaria vesca
FvH4_3g43110 Fragaria vesca
FvH4_3g43180 Fragaria vesca
FvH4_7g08040 Fragaria vesca
Glyma.06G268800 Glycine max
Glyma.12G135400 Glycine max
Glyma.12G135500 Glycine max
Glyma.12G214200 Glycine max
Glyma.13G287400 Glycine max
Glyma.15G240300 Glycine max
Glyma.U031131 Glycine max
Glyma.U031231 Glycine max
Gohir.A01G074600 Gossypium hirsutum
Gohir.D01G061200 Gossypium hirsutum
Gorai.002G082600 Gossypium raimondii
GSVIVG01014607001 Vitis vinifera
HanXRQChr05g0159201 Helianthus annuus
Haze_09611 Corylus avellana
Hma1.2p1_1546F.1_g289980 Hydrangea macrophylla
Hma1.2p1_1546F.1_g289990 Hydrangea macrophylla
HPP92_004136 Vanilla planifolia
Lalb_Chr14g0366151 Lupinus albus
Lalb_Chr19g0134751 Lupinus albus
Lj1A863T64 Lonicera japonica
Lj1A863T65 Lonicera japonica
Lj1C863T22 Lonicera japonica
Lj3g0020379 Lotus japonicus
Lj3g0022760 Lotus japonicus
Lj4g0006066 Lotus japonicus
Lju3590A0T10 Lonicera japonica
Lju3590A0T11 Lonicera japonica
Lsat_1_v5_gn_5_5721 Lactuca sativa
Manes.03G122901 Manihot esculenta
Manes.09G026933 Manihot esculenta
MD03G1211600 Malus domestica
Medtr2g082940 Medicago truncatula
Medtr4g081210 Medicago truncatula
Medtr4g081220 Medicago truncatula
Medtr4g133410 Medicago truncatula
Medtr5g034890 Medicago truncatula
Medtr7g007510 Medicago truncatula
Medtr7g025525 Medicago truncatula
Medtr7g025530 Medicago truncatula
Medtr7g025580 Medicago truncatula
Medtr8g070020 Medicago truncatula
MELO3C018128.2 Cucumis melo
Migut.H01856 Erythranthe guttata
MSTRG.14415 Avicennia marina
Nitab4.5_0000397g0040 Nicotiana tabacum
Nitab4.5_0000743g0080 Nicotiana tabacum
Nitab4.5_0009192g0010 Nicotiana tabacum
Nn1g03661 Nelumbo nucifera
Oeu007628.1 Olea europaea
Os02g0132600 Oryza sativa ssp. japonica
Peaxi162Scf01086g00156 Petunia axillaris
PGR031G3084 Punica granatum
PGSC0003DMG400019225 Solanum tuberosum
Phvul.003G295700 Phaseolus vulgaris
Phvul.005G091700 Phaseolus vulgaris
Phvul.005G091800 Phaseolus vulgaris
Phvul.011G140050 Phaseolus vulgaris
Potri.001G417400 Populus trichocarpa
Potri.011G133100 Populus trichocarpa
Prupe.4G202300 Prunus persica
Psat5g251840 Pisum sativum
Psat7g161600 Pisum sativum
PSO478G2228 Papaver somniferum
PSO541G2106 Papaver somniferum
PSO675G6436 Papaver somniferum
QL08p013313 Quercus lobata
QL08p013320 Quercus lobata
RcHm_v2.0_Chr4g0410111 Rosa chinensis
RcHm_v2.0_Chr5g0037541 Rosa chinensis
RcHm_v2.0_Chr5g0037551 Rosa chinensis
RcHm_v2.0_Chr5g0037561 Rosa chinensis
Sabra16G0283700 Salix brachista
Sc19g0005940 Simmondsia chinensis
Sc19g0005950 Simmondsia chinensis
Sc19g0005960 Simmondsia chinensis
Sed0011296 Sechium edule
Sed0011648 Sechium edule
SEGI_03301 Sequoiadendron giganteum
SEGI_25291 Sequoiadendron giganteum
SEGI_32012 Sequoiadendron giganteum
SGA_v2.0_scaffold9G05037 Striga asiatica
SHI50408 Sapria himalayana
SMO170G0018 Selaginella moellendorffii
Solyc07g064110.3 Solanum lycopersicum
Sopen07g032250 Solanum pennellii
Sp6g04150 Schrenkiella parvula
Sp7g20030 Schrenkiella parvula
TAR629G1976 Trochodendron aralioides
THA.LOC104813041 Tarenaya hassleriana
Thecc.07G052500 Theobroma cacao
Thhalv10024397m.g Eutrema salsugineum
Thhalv10028431m.g Eutrema salsugineum
TPR.G25924 Trifolium pratense
TPR.G36746 Trifolium pratense
TPR.G36748 Trifolium pratense
TWI39G1173 Tripterygium wilfordii
unitig_26.g9968 Utricularia gibba
unitig_749.g13972 Utricularia gibba
vmacro11767 Vaccinium macrocarpon
VMungo1080G1398 Vigna mungo
VMungo1127G0069 Vigna mungo
VMungo1127G0088 Vigna mungo
Zm00001eb231370 Zea mays

User provided reference genes

Program Settings