Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03870 Brassica napus
A02p08860 Brassica napus
A10p14260 Brassica napus
Aa31LG1G18310 Aethionema arabicum
Aa31LG2G15900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1093 Anthoceros agrestis
Actinidia29908 Actinidia chinensis
Actinidia38453 Actinidia chinensis
Ah.03g147100 Amaranthus hybridus
Ah.14g083830 Amaranthus hybridus
AL7G16580 Arabidopsis lyrata
AL8G32800 Arabidopsis lyrata
Aqoxy3G03231 Aquilegia oxysepala
Aqoxy7G02783 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1EL4AZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.24WPAI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7RYVI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVN50Z Arachis hypogaea
AT4G34620 Arabidopsis thaliana
AT5G56940 Arabidopsis thaliana
ATR0626G012 Amborella trichopoda
ATR0724G037 Amborella trichopoda
Atru.chr8.2333 Acer truncatum
AUR62003470 Chenopodium quinoa
AUR62017777 Chenopodium quinoa
BcaB01g04434 Brassica carinata
BcaB08g36038 Brassica carinata
BcaC01g06456 Brassica carinata
BcaC03g14195 Brassica carinata
BcaNung00682 Brassica carinata
BcaNung04917 Brassica carinata
BcaNung04920 Brassica carinata
BcaNung05244 Brassica carinata
BolC1t00406H Brassica oleracea
BolC2t07606H Brassica oleracea
BolC9t57700H Brassica oleracea
BraA01t00374Z Brassica rapa
BraA02t05955Z Brassica rapa
BraA10t43517Z Brassica rapa
C01p04180 Brassica napus
C02p14770 Brassica napus
C03p15250 Brassica napus
CANSAT11G2123 Cannabis sativa
CARHR242780 Cardamine hirsuta
CARHR242930 Cardamine hirsuta
CARHR270680 Cardamine hirsuta
Carub.0007s0566 Capsella rubella
Carub.0008s1742 Capsella rubella
Ca_09878_v3 Cicer arietinum L.
CBR_g21235 Chara braunii
Cc06_g11550 Coffea canephora
CDE02G0210 Ceratophyllum demersum
CDE06G2360 Ceratophyllum demersum
Cfa006747 Carpinus fangiana
Ciclev10013100m.g Citrus clementina
CiPaw.08G005200 Carya illinoinensis
ClCG03G015450 Citrullus lanatus
COL.COLO4_18186 Corchorus olitorius
Cpa.g.sc128.7 Carica papaya
Cre10.g429550 Chlamydomonas reinhardtii
Cre12.g494450 Chlamydomonas reinhardtii
CsaV3_1G040590 Cucumis sativus L.
CSS0001019 Camellia sinensis var. sinensis
CSS0017178 Camellia sinensis var. sinensis
CSS0022912 Camellia sinensis var. sinensis
CSS0031089 Camellia sinensis var. sinensis
CSS0031311 Camellia sinensis var. sinensis
CSS0037416 Camellia sinensis var. sinensis
DCAR_003521 Daucus carota
DCAR_031336 Daucus carota
Dinv36778 Davidia involucrata
Dinv42332 Davidia involucrata
Duzib150G0820 Durio zibethinus
Duzib168G1627 Durio zibethinus
Duzib187G0793 Durio zibethinus
ECA234G4558 Erigeron canadensis
EL10Ac6g15408 Beta vulgaris
Eucgr.C03471 Eucalyptus grandis
Eucgr.C03473 Eucalyptus grandis
FAN19G2985 Fragaria x ananassa
FAN23G2612 Fragaria x ananassa
FAN26G0002 Fragaria x ananassa
FAN26G2348 Fragaria x ananassa
FAN28G0810 Fragaria x ananassa
FvH4_1g07750 Fragaria vesca
Glyma.09G064500 Glycine max
Glyma.10G204500 Glycine max
Glyma.15G170800 Glycine max
Glyma.20G186000 Glycine max
Gohir.A05G030500 Gossypium hirsutum
Gohir.A10G064800 Gossypium hirsutum
Gohir.D05G031900 Gossypium hirsutum
Gohir.D10G066250 Gossypium hirsutum
Gohir.D10G066300 Gossypium hirsutum
Gorai.009G032100 Gossypium raimondii
Gorai.011G070400 Gossypium raimondii
GSVIVG01015186001 Vitis vinifera
HanXRQChr10g0319441 Helianthus annuus
HanXRQChr12g0354621 Helianthus annuus
Haze_04011 Corylus avellana
Haze_21391 Corylus avellana
Hma1.2p1_0433F.1_g152045 Hydrangea macrophylla
Hma1.2p1_1453F.1_g284300 Hydrangea macrophylla
Hma1.2p1_1453F.1_g284310 Hydrangea macrophylla
Hma1.2p1_1540F.1_g289659 Hydrangea macrophylla
Hma1.2p1_1540F.1_g289665 Hydrangea macrophylla
Hma1.2p1_1838F.1_g304840 Hydrangea macrophylla
Hma1.2p1_1859F.1_g305636 Hydrangea macrophylla
Hma1.2p1_2261F.1_g318350 Hydrangea macrophylla
Hma1.2p1_3088F.1_g332510 Hydrangea macrophylla
HPP92_004704 Vanilla planifolia
Hund04300 Selenicereus undatus
Hund04301 Selenicereus undatus
Lalb_Chr07g0180911 Lupinus albus
Lalb_Chr08g0232311 Lupinus albus
Lj2g0023567 Lotus japonicus
Lj5g0018552 Lotus japonicus
Lj6g0021196 Lotus japonicus
Lsat_1_v5_gn_5_142921 Lactuca sativa
Manes.01G198600 Manihot esculenta
Manes.05G131300 Manihot esculenta
Mapoly0011s0195 Marchantia polymorpha
Mapoly0087s0037 Marchantia polymorpha
MBI16_g10338_MAGBIO Magnolia biondii
MCO07G131 Micromonas commoda
MCO08G152 Micromonas commoda
MD02G1081900 Malus domestica
MD15G1209200 Malus domestica
Medtr1g076310 Medicago truncatula
Medtr2g039750 Medicago truncatula
Medtr5g014070 Medicago truncatula
MELO3C015489.2 Cucumis melo
Migut.J00455 Erythranthe guttata
MSTRG.5776 Avicennia marina
Nitab4.5_0001519g0020 Nicotiana tabacum
Nitab4.5_0001586g0160 Nicotiana tabacum
Nitab4.5_0002593g0030 Nicotiana tabacum
Nitab4.5_0004056g0030 Nicotiana tabacum
Nn7g37004 Nelumbo nucifera
Nn8g40845 Nelumbo nucifera
Oeu011490.1 Olea europaea
Oeu024080.1 Olea europaea
Os08g0517900 Oryza sativa ssp. japonica
Os09g0498100 Oryza sativa ssp. japonica
Peaxi162Scf01425g00001 Petunia axillaris
Peaxi162Scf01604g00008 Petunia axillaris
PGR102G2971 Punica granatum
PGSC0003DMG400022985 Solanum tuberosum
Phvul.007G102300 Phaseolus vulgaris
Phvul.009G231300 Phaseolus vulgaris
Potri.004G217400 Populus trichocarpa
Potri.013G128200 Populus trichocarpa
Pp3c11_14140 Physcomitrium patens
Pp3c1_7830 Physcomitrium patens
Pp3c2_38140 Physcomitrium patens
Pp3c2_38160 Physcomitrium patens
PRCOL_00003143 Prasinoderma coloniale
Prupe.7G207200 Prunus persica
Psat1g140000 Pisum sativum
Psat6g114960 Pisum sativum
PSO017G4091 Papaver somniferum
PSO063G1429 Papaver somniferum
PSO063G6037 Papaver somniferum
PSO170G4980 Papaver somniferum
PSO384G0167 Papaver somniferum
PSO384G0269 Papaver somniferum
PSO384G5082 Papaver somniferum
QL01p015391 Quercus lobata
QL02p062322 Quercus lobata
RcHm_v2.0_Chr2g0093641 Rosa chinensis
Rhsim03G0087900 Rhododendron simsii
Sabra04G0148100 Salix brachista
Sabra13G0107100 Salix brachista
Sabra19G0110000 Salix brachista
SalBow3G2856 Salvia bowleyana
Sc18g0002200 Simmondsia chinensis
Sed0010998 Sechium edule
Sed0014824 Sechium edule
SEGI_09210 Sequoiadendron giganteum
SEGI_10250 Sequoiadendron giganteum
SEGI_17182 Sequoiadendron giganteum
SGA_v2.0_scaffold337G49169 Striga asiatica
SGA_v2.0_scaffold40G15473 Striga asiatica
SGA_v2.0_scaffold49G18150 Striga asiatica
SHI28892 Sapria himalayana
SMO119G0404 Selaginella moellendorffii
SMO128G0011 Selaginella moellendorffii
SMO351G0283 Selaginella moellendorffii
Solyc07g008660.3 Solanum lycopersicum
Sopen07g004590 Solanum pennellii
Sp6g18640 Schrenkiella parvula
Sp7g32410 Schrenkiella parvula
TAR371G0179 Trochodendron aralioides
TAR371G0488 Trochodendron aralioides
TAR629G2636 Trochodendron aralioides
THA.LOC104804346 Tarenaya hassleriana
THA.LOC104811748 Tarenaya hassleriana
THA.LOC104813493 Tarenaya hassleriana
Thecc.09G086900 Theobroma cacao
Thhalv10014987m.g Eutrema salsugineum
Thhalv10026606m.g Eutrema salsugineum
TPR.G10463 Trifolium pratense
TPR.G13431 Trifolium pratense
TWI09G0130 Tripterygium wilfordii
TWI53G2020 Tripterygium wilfordii
TWI73G0679 Tripterygium wilfordii
unitig_22.g5106 Utricularia gibba
vmacro06300 Vaccinium macrocarpon
vmacro12780 Vaccinium macrocarpon
vmacro23435 Vaccinium macrocarpon
vmacro23436 Vaccinium macrocarpon
VMungo0251G0230 Vigna mungo
VMungo0251G0584 Vigna mungo
VMungo0720G1923 Vigna mungo
Zm00001eb317180 Zea mays

User provided reference genes

Program Settings