Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28680 Brassica napus
A07p14220 Brassica napus
A09p29470 Brassica napus
Aa31LG7G6640 Aethionema arabicum
Aa31LG9G14960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1478 Anthoceros agrestis
Actinidia29568 Actinidia chinensis
Actinidia33169 Actinidia chinensis
Ah.02g131050 Amaranthus hybridus
Ah.05g179250 Amaranthus hybridus
AL6G43270 Arabidopsis lyrata
Aqoxy6G00501 Aquilegia oxysepala
Aqoxy7G00032 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2I1I1C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LT225G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XHYK4N Arachis hypogaea
AT4G09650 Arabidopsis thaliana
ATR0605G225 Amborella trichopoda
ATR0796G229 Amborella trichopoda
Atru.chr11.2110 Acer truncatum
Atru.chr13.1881 Acer truncatum
Atru.chr5.726 Acer truncatum
AUR62005671 Chenopodium quinoa
AUR62022724 Chenopodium quinoa
AUR62028884 Chenopodium quinoa
BcaB01g02780 Brassica carinata
BcaB03g14186 Brassica carinata
BcaC01g04706 Brassica carinata
BcaC04g20948 Brassica carinata
BcaC06g34989 Brassica carinata
BolC3t15780H Brassica oleracea
BolC7t42626H Brassica oleracea
BolC9t56592H Brassica oleracea
BraA03t12067Z Brassica rapa
BraA07t29180Z Brassica rapa
BraA09t38512Z Brassica rapa
C03p34700 Brassica napus
C07p20940 Brassica napus
C09p37610 Brassica napus
CAN.G360.9 Capsicum annuum
CAN.G47.5 Capsicum annuum
CANSAT25G2288 Cannabis sativa
CANSAT56G1121 Cannabis sativa
CANSAT56G3603 Cannabis sativa
CARHR260570 Cardamine hirsuta
Carub.0006s2810 Capsella rubella
Ca_09526_v3 Cicer arietinum L.
Ca_26100_v3 Cicer arietinum L.
CBR_g87784 Chara braunii
Cc10_g06080 Coffea canephora
CDE02G4562 Ceratophyllum demersum
Cfa018797 Carpinus fangiana
Ciclev10002351m.g Citrus clementina
Ciclev10021230m.g Citrus clementina
CiPaw.11G007300 Carya illinoinensis
CiPaw.12G043000 Carya illinoinensis
ClCG08G002530 Citrullus lanatus
COL.COLO4_06252 Corchorus olitorius
COL.COLO4_17389 Corchorus olitorius
Cpa.g.sc66.121 Carica papaya
Cre11.g467569 Chlamydomonas reinhardtii
CsaV3_6G002740 Cucumis sativus L.
CSS0043683 Camellia sinensis var. sinensis
DCAR_002990 Daucus carota
DCAR_013172 Daucus carota
DCAR_017152 Daucus carota
Dinv13072 Davidia involucrata
Dinv25958 Davidia involucrata
Dinv34236 Davidia involucrata
Dinv44718 Davidia involucrata
Duzib138G0284 Durio zibethinus
Duzib213G0606 Durio zibethinus
ECA236G4264 Erigeron canadensis
ECA246G5055 Erigeron canadensis
EL10Ac6g13555 Beta vulgaris
Eucgr.E00026 Eucalyptus grandis
Eucgr.F04149 Eucalyptus grandis
FAN01G1829 Fragaria x ananassa
FAN03G1832 Fragaria x ananassa
FAN06G3527 Fragaria x ananassa
FAN06G5059 Fragaria x ananassa
FAN15G0653 Fragaria x ananassa
FAN24G0582 Fragaria x ananassa
FAN26G1927 Fragaria x ananassa
FAN27G2017 Fragaria x ananassa
FvH4_2g12490 Fragaria vesca
FvH4_7g17180 Fragaria vesca
Glyma.05G048000 Glycine max
Glyma.17G130100 Glycine max
Glyma.19G257900 Glycine max
Gohir.A01G040600 Gossypium hirsutum
Gohir.A12G114100 Gossypium hirsutum
Gohir.D01G028200 Gossypium hirsutum
Gohir.D12G117600 Gossypium hirsutum
Gorai.002G037600 Gossypium raimondii
Gorai.008G127400 Gossypium raimondii
GSVIVG01001595001 Vitis vinifera
HanXRQChr01g0001181 Helianthus annuus
HanXRQChr02g0043721 Helianthus annuus
HanXRQChr10g0278581 Helianthus annuus
HanXRQChr13g0423141 Helianthus annuus
Haze_07136 Corylus avellana
Hma1.2p1_0276F.1_g111290 Hydrangea macrophylla
Hma1.2p1_0883F.1_g232270 Hydrangea macrophylla
Hma1.2p1_1361F.1_g278140 Hydrangea macrophylla
Hma1.2p1_1723F.1_g299390 Hydrangea macrophylla
HPP92_004308 Vanilla planifolia
HPP92_022428 Vanilla planifolia
Hund25486 Selenicereus undatus
Lalb_Chr07g0183411 Lupinus albus
Lalb_Chr15g0076361 Lupinus albus
Lj1g0008335 Lotus japonicus
Lj4A710G52 Lonicera japonica
Lj4g0003489 Lotus japonicus
Lj4P109T42 Lonicera japonica
Lsat_1_v5_gn_1_4801 Lactuca sativa
Lsat_1_v5_gn_6_101941 Lactuca sativa
Manes.02G188100 Manihot esculenta
Manes.05G019500 Manihot esculenta
Mapoly0006s0050 Marchantia polymorpha
Mapoly0173s0013 Marchantia polymorpha
MBI05_g36578_MAGBIO Magnolia biondii
MBI18_g28945_MAGBIO Magnolia biondii
MCO11G452 Micromonas commoda
MD01G1085700 Malus domestica
MD10G1043200 Malus domestica
MD10G1172600 Malus domestica
MD10G1172700 Malus domestica
MD17G1003000 Malus domestica
Medtr4g103330 Medicago truncatula
Medtr7g117900 Medicago truncatula
MELO3C006001.2 Cucumis melo
MELO3C025005.2 Cucumis melo
Migut.B01904 Erythranthe guttata
Migut.C00219 Erythranthe guttata
MSTRG.22135 Avicennia marina
MSTRG.24477 Avicennia marina
Nitab4.5_0000258g0330 Nicotiana tabacum
Nitab4.5_0000425g0240 Nicotiana tabacum
Nitab4.5_0003865g0070 Nicotiana tabacum
Nitab4.5_0006745g0030 Nicotiana tabacum
Nn2g14435 Nelumbo nucifera
Nn4g25263 Nelumbo nucifera
Nn6g35751 Nelumbo nucifera
Oeu001061.1 Olea europaea
Os02g0750100 Oryza sativa ssp. japonica
Os03g0736600 Oryza sativa ssp. japonica
Peaxi162Scf00160g01617 Petunia axillaris
PGR102G2401 Punica granatum
PGSC0003DMG400007007 Solanum tuberosum
PGSC0003DMG400016959 Solanum tuberosum
Phvul.003G211100 Phaseolus vulgaris
Phvul.006G115400 Phaseolus vulgaris
Potri.013G117000 Populus trichocarpa
Potri.014G102100 Populus trichocarpa
Potri.019G087300 Populus trichocarpa
Pp3c23_11680 Physcomitrium patens
Pp3c23_6060 Physcomitrium patens
Pp3c24_12520 Physcomitrium patens
PRCOL_00001524 Prasinoderma coloniale
Prupe.2G193500 Prunus persica
Prupe.8G048900 Prunus persica
Psat3g001520 Pisum sativum
PSO384G0028 Papaver somniferum
PSO541G2449 Papaver somniferum
PSO675G8510 Papaver somniferum
QL08p046202 Quercus lobata
QL08p046209 Quercus lobata
QL08p046215 Quercus lobata
QL10p002938 Quercus lobata
RcHm_v2.0_Chr1g0360571 Rosa chinensis
RcHm_v2.0_Chr6g0272941 Rosa chinensis
Rhsim07G0198600 Rhododendron simsii
Sabra13G0099100 Salix brachista
Sabra14G0075100 Salix brachista
Sabra19G0097900 Salix brachista
Sabra19G0101400 Salix brachista
SalBow3G1544 Salvia bowleyana
SalBow3G2702 Salvia bowleyana
SalBow5G1182 Salvia bowleyana
SalBow7G2604 Salvia bowleyana
Sc04g0010380 Simmondsia chinensis
Sc23g0001970 Simmondsia chinensis
Sed0000690 Sechium edule
Sed0001592 Sechium edule
Sed0027763 Sechium edule
Sed0027822 Sechium edule
SEGI_06406 Sequoiadendron giganteum
SEGI_07127 Sequoiadendron giganteum
SEGI_11516 Sequoiadendron giganteum
SGA_v2.0_scaffold315G48377 Striga asiatica
SGA_v2.0_scaffold5G03046 Striga asiatica
SMO013G0019 Selaginella moellendorffii
Solyc05g050500.1 Solanum lycopersicum
Solyc12g056830.1 Solanum lycopersicum
Sopen05g028910 Solanum pennellii
Sopen12g029510 Solanum pennellii
Sp6g07950 Schrenkiella parvula
TAR374G0774 Trochodendron aralioides
TAR381G0896 Trochodendron aralioides
TAR625G0523 Trochodendron aralioides
TAR636G1756 Trochodendron aralioides
THA.LOC104806778 Tarenaya hassleriana
THA.LOC104816203 Tarenaya hassleriana
Thecc.01G337400 Theobroma cacao
Thecc.07G148800 Theobroma cacao
Thhalv10028838m.g Eutrema salsugineum
TPR.G19210 Trifolium pratense
TPR.G4697 Trifolium pratense
TWI34G0437 Tripterygium wilfordii
TWI34G1175 Tripterygium wilfordii
TWI59G0107 Tripterygium wilfordii
unitig_37.g13119 Utricularia gibba
vmacro04777 Vaccinium macrocarpon
VMungo0540G0853 Vigna mungo
VMungo1215G3266 Vigna mungo

User provided reference genes

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