Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48760 Brassica napus
A09p45310 Brassica napus
Aa31csc81G40 Aethionema arabicum
Aa31LG10G7350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3090 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_185.8 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_186.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_186.4 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_203.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3670 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_25.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_351.4 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_351.5 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_351.7 Anthoceros agrestis
Actinidia03043 Actinidia chinensis
Actinidia03044 Actinidia chinensis
Actinidia03045 Actinidia chinensis
Actinidia03046 Actinidia chinensis
Actinidia08029 Actinidia chinensis
Actinidia08030 Actinidia chinensis
Actinidia08031 Actinidia chinensis
Actinidia38262 Actinidia chinensis
Actinidia38263 Actinidia chinensis
Ah.10g032860 Amaranthus hybridus
Ah.11g043470 Amaranthus hybridus
AL5G32840 Arabidopsis lyrata
Aqoxy2G01803 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0MFP8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PUBH8J Arachis hypogaea
AT3G52250 Arabidopsis thaliana
ATR0314G007 Amborella trichopoda
ATR0314G009 Amborella trichopoda
Atru.chr12.725 Acer truncatum
AUR62020759 Chenopodium quinoa
AUR62027953 Chenopodium quinoa
BcaC07g39597 Brassica carinata
BolC7t45201H Brassica oleracea
BolC8t50370H Brassica oleracea
BraA03t13976Z Brassica rapa
BraA09t39994Z Brassica rapa
C07p46850 Brassica napus
C08p27500 Brassica napus
CAN.G131.2 Capsicum annuum
CANSAT56G0537 Cannabis sativa
CARHR162010 Cardamine hirsuta
Carub.0005s1861 Capsella rubella
Ca_04674_v3 Cicer arietinum L.
Ca_10580_v3 Cicer arietinum L.
Cc02_g11460 Coffea canephora
CDE02G1002 Ceratophyllum demersum
CDE09G0617 Ceratophyllum demersum
Cfa001606 Carpinus fangiana
Ciclev10030482m.g Citrus clementina
CiPaw.01G274600 Carya illinoinensis
CiPaw.02G175200 Carya illinoinensis
ClCG05G020880 Citrullus lanatus
COL.COLO4_23712 Corchorus olitorius
Cpa.g.sc466.10 Carica papaya
Cpa.g.sc53.52 Carica papaya
Cpa.g.sc53.53 Carica papaya
Cre06.g264400 Chlamydomonas reinhardtii
CsaV3_5G025770 Cucumis sativus L.
CsaV3_5G036430 Cucumis sativus L.
CSS0000465 Camellia sinensis var. sinensis
CSS0022533 Camellia sinensis var. sinensis
CSS0028910 Camellia sinensis var. sinensis
DCAR_006452 Daucus carota
DCAR_019123 Daucus carota
DCAR_019124 Daucus carota
Dinv11794 Davidia involucrata
Dinv31359 Davidia involucrata
Duzib106G1668 Durio zibethinus
Duzib114G0389 Durio zibethinus
ECA238G0789 Erigeron canadensis
EL10Ac2g03591 Beta vulgaris
Eucgr.G02815 Eucalyptus grandis
FAN01G2311 Fragaria x ananassa
FAN03G0982 Fragaria x ananassa
FAN06G3106 Fragaria x ananassa
FAN10G3307 Fragaria x ananassa
FvH4_7g19850 Fragaria vesca
Glyma.10G212600 Glycine max
Glyma.13G071701 Glycine max
Glyma.20G178500 Glycine max
Gohir.A05G297400 Gossypium hirsutum
Gohir.A10G207200 Gossypium hirsutum
Gohir.A13G024600 Gossypium hirsutum
Gohir.D05G297300 Gossypium hirsutum
Gohir.D10G215300 Gossypium hirsutum
Gohir.D13G023500 Gossypium hirsutum
Gorai.011G240800 Gossypium raimondii
Gorai.013G026300 Gossypium raimondii
GSVIVG01016309001 Vitis vinifera
GSVIVG01030762001 Vitis vinifera
HanXRQChr11g0323301 Helianthus annuus
HanXRQChr12g0357391 Helianthus annuus
HanXRQChr14g0457261 Helianthus annuus
Haze_16916 Corylus avellana
Haze_16917 Corylus avellana
Haze_16918 Corylus avellana
Hma1.2p1_1203F.1_g266910 Hydrangea macrophylla
Hma1.2p1_1203F.1_g266920 Hydrangea macrophylla
Hma1.2p1_1203F.1_g266930 Hydrangea macrophylla
Hma1.2p1_2975F.1_g331150 Hydrangea macrophylla
HPP92_006757 Vanilla planifolia
Hund19345 Selenicereus undatus
Lalb_Chr01g0010131 Lupinus albus
Lalb_Chr02g0141981 Lupinus albus
Lalb_Chr03g0035991 Lupinus albus
Lalb_Chr06g0162221 Lupinus albus
Lalb_Chr19g0129611 Lupinus albus
Lj1C919T3 Lonicera japonica
Lj2g0025480 Lotus japonicus
Lj5g0023323 Lotus japonicus
Lsat_1_v5_gn_2_113740 Lactuca sativa
Lsat_1_v5_gn_2_113780 Lactuca sativa
Manes.07G103600 Manihot esculenta
Manes.10G044400 Manihot esculenta
Mapoly0001s0480 Marchantia polymorpha
MBI14_g09786_MAGBIO Magnolia biondii
MBI15_g28963_MAGBIO Magnolia biondii
MCO13G549 Micromonas commoda
MD01G1110800 Malus domestica
MD07G1176800 Malus domestica
MD12G1111400 Malus domestica
MD12G1111500 Malus domestica
Medtr1g095570 Medicago truncatula
Medtr6g033340 Medicago truncatula
Medtr6g033345 Medicago truncatula
Medtr6g033350 Medicago truncatula
MELO3C002897.2 Cucumis melo
MELO3C012441.2 Cucumis melo
Migut.F01767 Erythranthe guttata
MSTRG.370 Avicennia marina
MSTRG.8149 Avicennia marina
Nitab4.5_0000233g0120 Nicotiana tabacum
Nitab4.5_0004081g0040 Nicotiana tabacum
Nn2g10723 Nelumbo nucifera
Nn2g13035 Nelumbo nucifera
Nn2g15341 Nelumbo nucifera
Nn3g16980 Nelumbo nucifera
Nn3g21281 Nelumbo nucifera
Nn6g34188 Nelumbo nucifera
Oeu007399.2 Olea europaea
Oeu014390.1 Olea europaea
Oeu033854.1 Olea europaea
Oeu042736.1 Olea europaea
Oeu043931.1 Olea europaea
Os05g0126300 Oryza sativa ssp. japonica
Peaxi162Scf00108g00911 Petunia axillaris
PGR044G0836 Punica granatum
PGR142G2490 Punica granatum
Phvul.007G093100 Phaseolus vulgaris
Potri.008G041900 Populus trichocarpa
Potri.010G220000 Populus trichocarpa
Pp3c11_8780 Physcomitrium patens
Pp3c11_8790 Physcomitrium patens
Pp3c12_21290 Physcomitrium patens
Pp3c12_21500 Physcomitrium patens
Pp3c4_6990 Physcomitrium patens
Pp3c4_7100 Physcomitrium patens
Pp3c7_16800 Physcomitrium patens
Prupe.2G215600 Prunus persica
Psat1g100160 Pisum sativum
Psat1g100200 Pisum sativum
Psat3g129200 Pisum sativum
Psat6g185160 Pisum sativum
Psat7g135120 Pisum sativum
PSO339G2433 Papaver somniferum
PSO384G3096 Papaver somniferum
QL08p056552 Quercus lobata
RcHm_v2.0_Chr1g0363841 Rosa chinensis
Rhsim09G0153200 Rhododendron simsii
Rhsim10G0111700 Rhododendron simsii
Sabra08G0028800 Salix brachista
Sabra10G0169800 Salix brachista
SalBow3G0597 Salvia bowleyana
SalBow4G2724 Salvia bowleyana
Sc20g0001950 Simmondsia chinensis
Sed0017215 Sechium edule
Sed0017725 Sechium edule
Sed0022604 Sechium edule
Sed0025548 Sechium edule
SEGI_14396 Sequoiadendron giganteum
SEGI_14984 Sequoiadendron giganteum
SEGI_23253 Sequoiadendron giganteum
SGA_v2.0_scaffold341G49358 Striga asiatica
SGA_v2.0_scaffold51G18682 Striga asiatica
SMO361G0003 Selaginella moellendorffii
SMO361G0472 Selaginella moellendorffii
SMO361G0517 Selaginella moellendorffii
Solyc04g049120.4 Solanum lycopersicum
Sopen04g018550 Solanum pennellii
Sp5g10010 Schrenkiella parvula
TAR081G0003 Trochodendron aralioides
TAR369G0111 Trochodendron aralioides
TAR369G0611 Trochodendron aralioides
TAR633G1985 Trochodendron aralioides
THA.LOC104806084 Tarenaya hassleriana
THA.LOC104819148 Tarenaya hassleriana
Thecc.10G070400 Theobroma cacao
Thhalv10010054m.g Eutrema salsugineum
TPR.G1826 Trifolium pratense
TPR.G36666 Trifolium pratense
TWI15G0830 Tripterygium wilfordii
TWI38G2393 Tripterygium wilfordii
unitig_0.g194 Utricularia gibba
unitig_60.g25703 Utricularia gibba
unitig_60.g25704 Utricularia gibba
vmacro04882 Vaccinium macrocarpon
VMungo0464G1633 Vigna mungo
VMungo0464G1901 Vigna mungo
VMungo0720G1431 Vigna mungo
VMungo1356G0001 Vigna mungo
Zm00001eb265240 Zea mays
Zm00001eb355010 Zea mays

User provided reference genes

Program Settings