Gene: Sopen04g018550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g018550
  • Transcript Identifier Sopen04g018550.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 45437963-45447199 : positive

Gene Family Information

  • ID HOM05D003156
  • #Genes/#Species 216/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g018550.1

Descriptions

  • Description Encodes a protein with a putative role in mRNA splicing. | Duplicated homeodomain-like superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: RNA splicing | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Myb, DNA-binding , Homeodomain-like , SANT, eukarya
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000122
ISO
PLAZA Integrative Orthologynegative regulation of transcription by RNA polymerase II AT3G52250
GO:2000617
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K9 acetylation AT3G52250
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy AT3G52250
GO:1900055
ISO
PLAZA Integrative Orthologyregulation of leaf senescence AT3G52250
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G52250
GO:1990619
ISO
PLAZA Integrative Orthologyhistone H3-K9 deacetylation AT3G52250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G52250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G52250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.3.2.1.1.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component PWR