Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12440 Brassica napus
A08p15290 Brassica napus
A08p18300 Brassica napus
A09p02510 Brassica napus
A09p02920 Brassica napus
Aa31LG11G6940 Aethionema arabicum
Aa31LG6G3130 Aethionema arabicum
Aa31LG9G9130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2260 Anthoceros agrestis
Actinidia21815 Actinidia chinensis
Actinidia31160 Actinidia chinensis
Ah.08g217130 Amaranthus hybridus
Ah.15g095090 Amaranthus hybridus
AL6G49040 Arabidopsis lyrata
AL7G33040 Arabidopsis lyrata
Aqoxy3G02403 Aquilegia oxysepala
Aqoxy7G00078 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D190K1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LI91AU Arachis hypogaea
AT4G05450 Arabidopsis thaliana
AT4G21090 Arabidopsis thaliana
ATR0602G096 Amborella trichopoda
ATR0602G099 Amborella trichopoda
ATR0730G047 Amborella trichopoda
ATR0730G117 Amborella trichopoda
Atru.chr1.863 Acer truncatum
AUR62000675 Chenopodium quinoa
AUR62005278 Chenopodium quinoa
AUR62007156 Chenopodium quinoa
AUR62018855 Chenopodium quinoa
BcaB01g01918 Brassica carinata
BcaB03g11699 Brassica carinata
BcaC01g00717 Brassica carinata
BcaC04g23948 Brassica carinata
BcaC09g51262 Brassica carinata
BcaNung03845 Brassica carinata
BolC1t01451H Brassica oleracea
BolC3t15974H Brassica oleracea
BolC3t20634H Brassica oleracea
BolC9t53225H Brassica oleracea
BolC9t53231H Brassica oleracea
BraA01t01190Z Brassica rapa
BraA08t33787Z Brassica rapa
C01p15020 Brassica napus
C03p83530 Brassica napus
C09p03020 Brassica napus
CAN.G552.6 Capsicum annuum
CAN.G71.20 Capsicum annuum
CANSAT21G0422 Cannabis sativa
CARHR227670 Cardamine hirsuta
CARHR252120 Cardamine hirsuta
Carub.0006s3336 Capsella rubella
Carub.0007s2034 Capsella rubella
Ca_01091_v3 Cicer arietinum L.
Ca_21334_v3 Cicer arietinum L.
Ca_30965_v3 Cicer arietinum L.
CBR_g29317 Chara braunii
Cc02_g16070 Coffea canephora
CDE04G2246 Ceratophyllum demersum
CDE05G1735 Ceratophyllum demersum
CDE05G2273 Ceratophyllum demersum
Cfa002946 Carpinus fangiana
Cfa003214 Carpinus fangiana
Ciclev10003949m.g Citrus clementina
Ciclev10010355m.g Citrus clementina
Ciclev10023035m.g Citrus clementina
CiPaw.03G201700 Carya illinoinensis
CiPaw.04G139500 Carya illinoinensis
ClCG09G021070 Citrullus lanatus
COL.COLO4_26691 Corchorus olitorius
COL.COLO4_26692 Corchorus olitorius
COL.COLO4_26697 Corchorus olitorius
Cpa.g.sc19.250 Carica papaya
Cre12.g559950 Chlamydomonas reinhardtii
CsaV3_7G018590 Cucumis sativus L.
CSS0011688 Camellia sinensis var. sinensis
Dinv20400 Davidia involucrata
Dinv37842 Davidia involucrata
Duzib150G1495 Durio zibethinus
Duzib168G1223 Durio zibethinus
ECA232G0343 Erigeron canadensis
ECA247G1098 Erigeron canadensis
EL10Ac4g09817 Beta vulgaris
EL10Ac7g16455 Beta vulgaris
Eucgr.C00772 Eucalyptus grandis
FAN02G1504 Fragaria x ananassa
FAN05G5061 Fragaria x ananassa
FAN07G2422 Fragaria x ananassa
FAN09G0657 Fragaria x ananassa
FAN12G0012 Fragaria x ananassa
FAN12G3303 Fragaria x ananassa
FAN14G2906 Fragaria x ananassa
FAN14G4055 Fragaria x ananassa
FAN17G2943 Fragaria x ananassa
FAN22G1647 Fragaria x ananassa
FvH4_4g10710 Fragaria vesca
FvH4_6g35300 Fragaria vesca
Glyma.08G073200 Glycine max
Glyma.13G113400 Glycine max
Glyma.17G046300 Glycine max
Gohir.A05G035600 Gossypium hirsutum
Gohir.A06G079201 Gossypium hirsutum
Gohir.A07G233100 Gossypium hirsutum
Gohir.D05G037100 Gossypium hirsutum
Gohir.D06G078600 Gossypium hirsutum
Gohir.D07G240300 Gossypium hirsutum
Gorai.001G276500 Gossypium raimondii
Gorai.009G037600 Gossypium raimondii
Gorai.010G091600 Gossypium raimondii
GSVIVG01015024001 Vitis vinifera
HanXRQChr04g0094441 Helianthus annuus
HanXRQChr15g0497201 Helianthus annuus
Haze_25794 Corylus avellana
Haze_26060 Corylus avellana
Haze_26139 Corylus avellana
Haze_27730 Corylus avellana
Hma1.2p1_0229F.1_g096880 Hydrangea macrophylla
HPP92_023115 Vanilla planifolia
Hund18656 Selenicereus undatus
Lalb_Chr12g0200321 Lupinus albus
Lalb_Chr13g0299241 Lupinus albus
Lj4g0003144 Lotus japonicus
Lj4g0026539 Lotus japonicus
Lj5A31T64 Lonicera japonica
Lj9A536T76 Lonicera japonica
Lsat_1_v5_gn_4_91180 Lactuca sativa
Manes.02G158300 Manihot esculenta
Manes.16G092200 Manihot esculenta
Manes.16G092300 Manihot esculenta
Mapoly0046s0056 Marchantia polymorpha
MBI06_g03983_MAGBIO Magnolia biondii
MCO08G210 Micromonas commoda
MD09G1176800 Malus domestica
MD12G1000100 Malus domestica
MD14G1000700 Malus domestica
MD17G1150000 Malus domestica
Medtr1g112970 Medicago truncatula
Medtr4g124760 Medicago truncatula
Medtr4g131820 Medicago truncatula
MELO3C024903.2 Cucumis melo
Migut.B01759 Erythranthe guttata
MSTRG.4851 Avicennia marina
Nitab4.5_0000023g0720 Nicotiana tabacum
Nitab4.5_0002741g0080 Nicotiana tabacum
Nitab4.5_0002786g0030 Nicotiana tabacum
Nitab4.5_0007154g0030 Nicotiana tabacum
Nn3g21661 Nelumbo nucifera
Nn4g25626 Nelumbo nucifera
Oeu036601.1 Olea europaea
Oeu052950.1 Olea europaea
Os07g0110300 Oryza sativa ssp. japonica
Os09g0437900 Oryza sativa ssp. japonica
Peaxi162Scf00004g02627 Petunia axillaris
Peaxi162Scf00032g00328 Petunia axillaris
PGR083G2449 Punica granatum
PGR083G2704 Punica granatum
PGSC0003DMG400010306 Solanum tuberosum
PGSC0003DMG400010698 Solanum tuberosum
Phvul.003G127900 Phaseolus vulgaris
Phvul.011G080850 Phaseolus vulgaris
Potri.001G044700 Populus trichocarpa
Potri.003G182100 Populus trichocarpa
Pp3c9_680 Physcomitrium patens
PRCOL_00001654 Prasinoderma coloniale
Prupe.3G035900 Prunus persica
Prupe.7G000600 Prunus persica
Psat4g007800 Pisum sativum
PSO223G0027 Papaver somniferum
PSO339G4173 Papaver somniferum
PSO386G0015 Papaver somniferum
PSO541G3820 Papaver somniferum
PSO675G0123 Papaver somniferum
QL05p003034 Quercus lobata
QL05p003127 Quercus lobata
QL11p002795 Quercus lobata
QL12p030498 Quercus lobata
RcHm_v2.0_Chr2g0146741 Rosa chinensis
RcHm_v2.0_Chr4g0406961 Rosa chinensis
RcHm_v2.0_Chr4g0407001 Rosa chinensis
RcHm_v2.0_Chr6g0270801 Rosa chinensis
Rhsim08G0242000 Rhododendron simsii
Rhsim12G0212100 Rhododendron simsii
Sabra01G0030900 Salix brachista
Sabra03G0133000 Salix brachista
SalBow3G1224 Salvia bowleyana
SalBow5G5714 Salvia bowleyana
Sc15g0000670 Simmondsia chinensis
Sed0015531 Sechium edule
SEGI_38970 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02311 Striga asiatica
SMO361G0018 Selaginella moellendorffii
SMO361G0025 Selaginella moellendorffii
SMO367G1254 Selaginella moellendorffii
Solyc01g008460.3 Solanum lycopersicum
Solyc11g065640.2 Solanum lycopersicum
Sopen01g003980 Solanum pennellii
Sopen11g025360 Solanum pennellii
Sp6g03630 Schrenkiella parvula
Sp7g19170 Schrenkiella parvula
TAR383G0155 Trochodendron aralioides
TAR626G0878 Trochodendron aralioides
THA.LOC104812344 Tarenaya hassleriana
THA.LOC104823133 Tarenaya hassleriana
Thecc.09G071100 Theobroma cacao
Thhalv10026290m.g Eutrema salsugineum
Thhalv10029287m.g Eutrema salsugineum
Thhalv10029400m.g Eutrema salsugineum
TPR.G8739 Trifolium pratense
TWI34G1280 Tripterygium wilfordii
TWI63G0332 Tripterygium wilfordii
unitig_749.g14350 Utricularia gibba
vmacro11400 Vaccinium macrocarpon
vmacro15064 Vaccinium macrocarpon
vmacro15065 Vaccinium macrocarpon
vmacro22020 Vaccinium macrocarpon
VMungo1215G3337 Vigna mungo
Zm00001eb278530 Zea mays
Zm00001eb374000 Zea mays

User provided reference genes

Program Settings