Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02670 Brassica napus
A01p34880 Brassica napus
A03p64040 Brassica napus
Aa31LG6G13020 Aethionema arabicum
Aa31LG8G6630 Aethionema arabicum
Actinidia17442 Actinidia chinensis
Actinidia22974 Actinidia chinensis
Actinidia27838 Actinidia chinensis
Actinidia31235 Actinidia chinensis
Actinidia32084 Actinidia chinensis
Ah.03g148800 Amaranthus hybridus
AL3G33380 Arabidopsis lyrata
AL7G14990 Arabidopsis lyrata
Aqoxy6G02341 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4M6RGX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4V5YZV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SH99DR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WD5AW4 Arachis hypogaea
AT3G19860 Arabidopsis thaliana
AT4G36060 Arabidopsis thaliana
ATR0810G161 Amborella trichopoda
ATR1134G035 Amborella trichopoda
Atru.chr3.803 Acer truncatum
Atru.chr5.3226 Acer truncatum
AUR62003365 Chenopodium quinoa
AUR62010097 Chenopodium quinoa
AUR62013093 Chenopodium quinoa
AUR62029468 Chenopodium quinoa
BcaC09g48940 Brassica carinata
BcaNung00768 Brassica carinata
BcaNung03019 Brassica carinata
BcaNung03021 Brassica carinata
BolC1t00283H Brassica oleracea
BolC1t02744H Brassica oleracea
BolC2t08020H Brassica oleracea
BolC5t33202H Brassica oleracea
BolC7t46575H Brassica oleracea
BraA01t00253Z Brassica rapa
BraA03t15471Z Brassica rapa
C01p02970 Brassica napus
C01p44290 Brassica napus
C02p18750 Brassica napus
C07p61510 Brassica napus
CAN.G588.25 Capsicum annuum
CANSAT01G2970 Cannabis sativa
CANSAT25G1721 Cannabis sativa
CARHR095380 Cardamine hirsuta
CARHR244460 Cardamine hirsuta
Carub.0003s1974 Capsella rubella
Carub.0007s0417 Capsella rubella
Ca_19000_v3 Cicer arietinum L.
Cc02_g16520 Coffea canephora
Cc07_g10760 Coffea canephora
CDE05G0451 Ceratophyllum demersum
CDE05G2414 Ceratophyllum demersum
Cfa005183 Carpinus fangiana
Cfa006975 Carpinus fangiana
Ciclev10028783m.g Citrus clementina
CiPaw.06G125400 Carya illinoinensis
CiPaw.07G058800 Carya illinoinensis
CiPaw.08G131400 Carya illinoinensis
ClCG01G020320 Citrullus lanatus
ClCG02G011390 Citrullus lanatus
COL.COLO4_17256 Corchorus olitorius
COL.COLO4_21904 Corchorus olitorius
Cpa.g.sc17.155 Carica papaya
Cpa.g.sc6.255 Carica papaya
CsaV3_2G015700 Cucumis sativus L.
CsaV3_6G047120 Cucumis sativus L.
CSS0015165 Camellia sinensis var. sinensis
CSS0021352 Camellia sinensis var. sinensis
CSS0029047 Camellia sinensis var. sinensis
DCAR_022957 Daucus carota
Dinv33630 Davidia involucrata
Dinv40090 Davidia involucrata
Duzib052G0688 Durio zibethinus
Duzib187G0417 Durio zibethinus
Duzib248G0851 Durio zibethinus
ECA232G2587 Erigeron canadensis
ECA233G5410 Erigeron canadensis
EL10Ac9g21441 Beta vulgaris
Eucgr.A02944 Eucalyptus grandis
Eucgr.C01360 Eucalyptus grandis
Eucgr.C02076 Eucalyptus grandis
Eucgr.E02120 Eucalyptus grandis
Eucgr.E03686 Eucalyptus grandis
Eucgr.F04044 Eucalyptus grandis
Eucgr.G01757 Eucalyptus grandis
Eucgr.I02346 Eucalyptus grandis
Eucgr.L03550 Eucalyptus grandis
Eucgr.L03636 Eucalyptus grandis
FAN15G0773 Fragaria x ananassa
FAN19G0902 Fragaria x ananassa
FAN20G1328 Fragaria x ananassa
FAN23G2650 Fragaria x ananassa
FAN24G0689 Fragaria x ananassa
FAN26G1284 Fragaria x ananassa
FAN26G3019 Fragaria x ananassa
FAN27G3375 Fragaria x ananassa
FAN28G2069 Fragaria x ananassa
FvH4_1g11770 Fragaria vesca
FvH4_2g02000 Fragaria vesca
Glyma.07G171600 Glycine max
Glyma.08G148500 Glycine max
Glyma.12G024400 Glycine max
Glyma.15G215100 Glycine max
Gohir.A02G170900 Gossypium hirsutum
Gohir.A03G203100 Gossypium hirsutum
Gohir.A11G175100 Gossypium hirsutum
Gohir.D02G224400 Gossypium hirsutum
Gohir.D03G009200 Gossypium hirsutum
Gohir.D11G182600 Gossypium hirsutum
Gorai.003G009400 Gossypium raimondii
Gorai.005G252200 Gossypium raimondii
Gorai.007G194400 Gossypium raimondii
GSVIVG01018777001 Vitis vinifera
GSVIVG01024084001 Vitis vinifera
HanXRQChr17g0553701 Helianthus annuus
Haze_02198 Corylus avellana
Haze_25747 Corylus avellana
Hma1.2p1_0956F.1_g241270 Hydrangea macrophylla
Hma1.2p1_1385F.1_g279750 Hydrangea macrophylla
HPP92_026029 Vanilla planifolia
HPP92_027730 Vanilla planifolia
Hund06404 Selenicereus undatus
Hund14046 Selenicereus undatus
Lalb_Chr01g0001311 Lupinus albus
Lalb_Chr03g0024691 Lupinus albus
Lalb_Chr19g0139511 Lupinus albus
Lj2A468T74 Lonicera japonica
Lj3g0016767 Lotus japonicus
Lj4A218T53 Lonicera japonica
Lj5C185T3 Lonicera japonica
Lsat_1_v5_gn_4_144860 Lactuca sativa
Lsat_1_v5_gn_8_125901 Lactuca sativa
Manes.01G145900 Manihot esculenta
Manes.05G200500 Manihot esculenta
Mapoly0025s0044 Marchantia polymorpha
MBI09_g12954_MAGBIO Magnolia biondii
MD02G1132000 Malus domestica
MD05G1115800 Malus domestica
MD15G1245200 Malus domestica
Medtr1g032600 Medicago truncatula
Medtr4g075480 Medicago truncatula
MELO3C007905.2 Cucumis melo
MELO3C020781.2 Cucumis melo
Migut.N01282 Erythranthe guttata
MSTRG.27673 Avicennia marina
Nitab4.5_0000128g0360 Nicotiana tabacum
Nitab4.5_0000283g0080 Nicotiana tabacum
Nitab4.5_0000980g0160 Nicotiana tabacum
Nitab4.5_0007006g0010 Nicotiana tabacum
Nn5g29092 Nelumbo nucifera
Oeu002954.1 Olea europaea
Oeu012558.1 Olea europaea
Os02g0433600 Oryza sativa ssp. japonica
Peaxi162Scf00362g01043 Petunia axillaris
Peaxi162Scf00684g00019 Petunia axillaris
PGR042G1899 Punica granatum
PGR119G0495 Punica granatum
PGSC0003DMG400001594 Solanum tuberosum
Phvul.003G016700 Phaseolus vulgaris
Phvul.011G026500 Phaseolus vulgaris
Phvul.011G178100 Phaseolus vulgaris
Potri.004G168100 Populus trichocarpa
Potri.005G113400 Populus trichocarpa
Potri.009G129600 Populus trichocarpa
Pp3c11_20170 Physcomitrium patens
Pp3c11_23000 Physcomitrium patens
Pp3c7_3790 Physcomitrium patens
Prupe.7G168500 Prunus persica
Prupe.8G160700 Prunus persica
Psat6g051600 Pisum sativum
Psat7g178360 Pisum sativum
PSO541G5166 Papaver somniferum
PSO675G5479 Papaver somniferum
QL06p032886 Quercus lobata
QL11p047530 Quercus lobata
RcHm_v2.0_Chr2g0099391 Rosa chinensis
RcHm_v2.0_Chr6g0245181 Rosa chinensis
Rhsim10G0211800 Rhododendron simsii
Sabra04G0112700 Salix brachista
Sabra09G0099100 Salix brachista
SalBow3G2226 Salvia bowleyana
SalBow3G3562 Salvia bowleyana
Sc03g0003590 Simmondsia chinensis
Sed0000450 Sechium edule
Sed0015022 Sechium edule
Sed0015691 Sechium edule
SEGI_06039 Sequoiadendron giganteum
SEGI_39261 Sequoiadendron giganteum
SGA_v2.0_scaffold207G41883 Striga asiatica
SGA_v2.0_scaffold80G25871 Striga asiatica
SMO274G0033 Selaginella moellendorffii
Solyc01g111130.4 Solanum lycopersicum
Sopen01g053190 Solanum pennellii
Sp3g17880 Schrenkiella parvula
Sp7g33840 Schrenkiella parvula
TAR376G0456 Trochodendron aralioides
TAR381G1269 Trochodendron aralioides
TAR628G1174 Trochodendron aralioides
THA.LOC104804101 Tarenaya hassleriana
THA.LOC104819748 Tarenaya hassleriana
Thecc.01G018200 Theobroma cacao
Thecc.02G067000 Theobroma cacao
Thhalv10021271m.g Eutrema salsugineum
Thhalv10023630m.g Eutrema salsugineum
Thhalv10026039m.g Eutrema salsugineum
TPR.G17152 Trifolium pratense
TPR.G35316 Trifolium pratense
TWI31G1466 Tripterygium wilfordii
TWI53G0815 Tripterygium wilfordii
TWI75G0491 Tripterygium wilfordii
unitig_0.g2346 Utricularia gibba
unitig_0.g2347 Utricularia gibba
vmacro17382 Vaccinium macrocarpon
vmacro22134 Vaccinium macrocarpon
VMungo1127G0811 Vigna mungo
VMungo1127G0884 Vigna mungo
VMungo1215G1329 Vigna mungo
VMungo1215G2525 Vigna mungo
Zm00001eb159750 Zea mays

User provided reference genes

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