Gene: ATR0810G161

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0810G161
  • Transcript Identifier ATR0810G161.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00041 : 3444526-3450958 : positive

Gene Family Information

  • ID HOM05D003097
  • #Genes/#Species 222/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00041.167.v1.0
  • pacid 31559548

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055072
IEA
InterProiron ion homeostasis
GO:0006879
ISO
PLAZA Integrative Orthologycellular iron ion homeostasis AT3G19860
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Os02g0433600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G19860
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G19860
GO:1990837
ISO
PLAZA Integrative Orthologysequence-specific double-stranded DNA binding AT3G19860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G36060
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G36060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR044579 Transcription factor bHLH11/121
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
25.4.2.1.4 Nutrient uptake.metal homeostasis.iron.regulation.iron homeostasis regulator (POPEYE)