Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20670 Brassica napus
A06p02740 Brassica napus
A06p03880 Brassica napus
Aa31LG10G3360 Aethionema arabicum
Aa31LG10G4610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1888 Anthoceros agrestis
Actinidia00513 Actinidia chinensis
Actinidia07473 Actinidia chinensis
Ah.01g019560 Amaranthus hybridus
AL1G56300 Arabidopsis lyrata
AL1G56510 Arabidopsis lyrata
AL307U10030 Arabidopsis lyrata
AL325U10010 Arabidopsis lyrata
AL4G25950 Arabidopsis lyrata
Aqoxy3G03189 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AHB8GW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U64SVT Arachis hypogaea
AT1G49340 Arabidopsis thaliana
AT1G51040 Arabidopsis thaliana
ATR0749G081 Amborella trichopoda
Atru.chr1.1328 Acer truncatum
Atru.chr5.2983 Acer truncatum
Atru.chr5.2984 Acer truncatum
AUR62011350 Chenopodium quinoa
AUR62016712 Chenopodium quinoa
BcaB02g11071 Brassica carinata
BcaB07g33546 Brassica carinata
BcaB07g33678 Brassica carinata
BcaC05g27375 Brassica carinata
BcaC05g27516 Brassica carinata
BcaC08g43133 Brassica carinata
BcaC08g43274 Brassica carinata
BolC5t32031H Brassica oleracea
BolC5t32215H Brassica oleracea
BolC6t35540H Brassica oleracea
BolC6t35733H Brassica oleracea
BraA05t20886Z Brassica rapa
BraA05t20975Z Brassica rapa
BraA06t23482Z Brassica rapa
BraA06t23597Z Brassica rapa
C05p33050 Brassica napus
C05p34900 Brassica napus
C06p04080 Brassica napus
C06p06220 Brassica napus
CAN.G566.47 Capsicum annuum
CAN.G638.23 Capsicum annuum
CAN.G776.1 Capsicum annuum
CANSAT21G0290 Cannabis sativa
CANSAT25G2870 Cannabis sativa
CARHR039330 Cardamine hirsuta
Carub.0001s3852 Capsella rubella
Carub.0001s3993 Capsella rubella
Ca_15379_v3 Cicer arietinum L.
CBR_g31025 Chara braunii
Cc02_g17780 Coffea canephora
Cc03_g13160 Coffea canephora
CDE04G1756 Ceratophyllum demersum
CDE04G2374 Ceratophyllum demersum
CDE04G3709 Ceratophyllum demersum
CDE07G0043 Ceratophyllum demersum
CDE07G0793 Ceratophyllum demersum
CDE07G1820 Ceratophyllum demersum
Cfa027017 Carpinus fangiana
Ciclev10027664m.g Citrus clementina
CiPaw.06G137000 Carya illinoinensis
ClCG02G005170 Citrullus lanatus
ClCG11G004530 Citrullus lanatus
COL.COLO4_32443 Corchorus olitorius
Cpa.g.sc62.125 Carica papaya
Cpa.g.sc62.126 Carica papaya
Cre05.g245550 Chlamydomonas reinhardtii
CsaV3_2G014550 Cucumis sativus L.
CsaV3_2G014560 Cucumis sativus L.
CsaV3_7G023410 Cucumis sativus L.
CSS0001432 Camellia sinensis var. sinensis
CSS0026532 Camellia sinensis var. sinensis
CSS0027140 Camellia sinensis var. sinensis
CSS0034967 Camellia sinensis var. sinensis
DCAR_000244 Daucus carota
DCAR_003639 Daucus carota
Dinv42085 Davidia involucrata
Duzib052G1069 Durio zibethinus
Duzib132G0336 Durio zibethinus
ECA234G4407 Erigeron canadensis
EL10Ac9g21746 Beta vulgaris
Eucgr.G00449 Eucalyptus grandis
Eucgr.G00451 Eucalyptus grandis
Eucgr.L03231 Eucalyptus grandis
FAN15G0570 Fragaria x ananassa
FAN24G1972 Fragaria x ananassa
FAN24G2674 Fragaria x ananassa
FAN27G0914 Fragaria x ananassa
FAN27G3350 Fragaria x ananassa
FvH4_2g08470 Fragaria vesca
Glyma.04G013900 Glycine max
Glyma.06G013800 Glycine max
Gohir.A03G179500 Gossypium hirsutum
Gohir.A04G117000 Gossypium hirsutum
Gohir.D02G202895 Gossypium hirsutum
Gohir.D04G158700 Gossypium hirsutum
Gohir.D10G186500 Gossypium hirsutum
Gorai.005G228400 Gossypium raimondii
Gorai.010G148500 Gossypium raimondii
Gorai.012G146100 Gossypium raimondii
GSVIVG01031931001 Vitis vinifera
HanXRQChr08g0216591 Helianthus annuus
HanXRQChr10g0307291 Helianthus annuus
Haze_02363 Corylus avellana
Hma1.2p1_0196F.1_g084730 Hydrangea macrophylla
HPP92_026531 Vanilla planifolia
HPP92_026558 Vanilla planifolia
Hund00286 Selenicereus undatus
Hund06224 Selenicereus undatus
Lalb_Chr00c44g0412571 Lupinus albus
Lalb_Chr08g0246561 Lupinus albus
Lalb_Chr23g0265471 Lupinus albus
Lj1g0018032 Lotus japonicus
Lj5C199G5 Lonicera japonica
Lj9C368G4 Lonicera japonica
Lsat_1_v5_gn_1_62281 Lactuca sativa
Lsat_1_v5_gn_2_102140 Lactuca sativa
Lsat_1_v5_gn_2_2580 Lactuca sativa
Lsat_1_v5_gn_3_48181 Lactuca sativa
Lsat_1_v5_gn_3_72420 Lactuca sativa
Lsat_1_v5_gn_4_53741 Lactuca sativa
Lsat_1_v5_gn_5_118040 Lactuca sativa
Lsat_1_v5_gn_5_122700 Lactuca sativa
Lsat_1_v5_gn_5_127261 Lactuca sativa
Lsat_1_v5_gn_6_71821 Lactuca sativa
Lsat_1_v5_gn_6_86720 Lactuca sativa
Lsat_1_v5_gn_7_3121 Lactuca sativa
Lsat_1_v5_gn_7_31520 Lactuca sativa
Lsat_1_v5_gn_7_71981 Lactuca sativa
Lsat_1_v5_gn_7_80801 Lactuca sativa
Lsat_1_v5_gn_8_45721 Lactuca sativa
Lsat_1_v5_gn_8_66001 Lactuca sativa
Lsat_1_v5_gn_9_109381 Lactuca sativa
Manes.15G165000 Manihot esculenta
Mapoly0001s0228 Marchantia polymorpha
Mapoly0001s0451 Marchantia polymorpha
MBI03_g27663_MAGBIO Magnolia biondii
MBI16_g11567_MAGBIO Magnolia biondii
MBI16_g11568_MAGBIO Magnolia biondii
MD05G1068200 Malus domestica
MD10G1078200 Malus domestica
Medtr3g116250 Medicago truncatula
MELO3C012545.2 Cucumis melo
MELO3C020989.2 Cucumis melo
Migut.B00253 Erythranthe guttata
MSTRG.20096 Avicennia marina
Nitab4.5_0000336g0110 Nicotiana tabacum
Nitab4.5_0000336g0120 Nicotiana tabacum
Nitab4.5_0000736g0060 Nicotiana tabacum
Nitab4.5_0000982g0100 Nicotiana tabacum
Nitab4.5_0002814g0110 Nicotiana tabacum
Nitab4.5_0005596g0010 Nicotiana tabacum
Nitab4.5_0005596g0020 Nicotiana tabacum
Nitab4.5_0005596g0070 Nicotiana tabacum
Nitab4.5_0006334g0010 Nicotiana tabacum
Nn1g03865 Nelumbo nucifera
Nn3g17070 Nelumbo nucifera
Nn4g22984 Nelumbo nucifera
Oeu010510.2 Olea europaea
Oeu020770.2 Olea europaea
Os03g0711200 Oryza sativa ssp. japonica
Peaxi162Scf00061g00027 Petunia axillaris
Peaxi162Scf00242g00009 Petunia axillaris
Peaxi162Scf00242g00019 Petunia axillaris
Peaxi162Scf00242g00110 Petunia axillaris
Peaxi162Scf00684g00421 Petunia axillaris
PGR042G2422 Punica granatum
Phvul.009G009000 Phaseolus vulgaris
Potri.004G152400 Populus trichocarpa
Potri.009G113700 Populus trichocarpa
Pp3c22_1940 Physcomitrium patens
Pp3c5_19540 Physcomitrium patens
Prupe.8G100100 Prunus persica
Psat0s6522g0040 Pisum sativum
Psat5g008280 Pisum sativum
Psat7g044200 Pisum sativum
PSO161G0089 Papaver somniferum
PSO478G0141 Papaver somniferum
QL11p043005 Quercus lobata
QL11p043039 Quercus lobata
RcHm_v2.0_Chr6g0263811 Rosa chinensis
Rhsim08G0089300 Rhododendron simsii
Rhsim11G0174300 Rhododendron simsii
Sabra04G0101100 Salix brachista
Sabra09G0087300 Salix brachista
SalBow6G2407 Salvia bowleyana
SalBow6G4859 Salvia bowleyana
Sc18g0004600 Simmondsia chinensis
Sed0010503 Sechium edule
Sed0019364 Sechium edule
SEGI_25657 Sequoiadendron giganteum
SEGI_28498 Sequoiadendron giganteum
SEGI_36294 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13157 Striga asiatica
SGA_v2.0_scaffold58G20555 Striga asiatica
SGA_v2.0_scaffold61G21161 Striga asiatica
SHI05424 Sapria himalayana
SMO116G0267 Selaginella moellendorffii
Solyc11g043120.2 Solanum lycopersicum
Solyc11g043130.2 Solanum lycopersicum
Sopen11g019550 Solanum pennellii
Sp1g36200 Schrenkiella parvula
Sp1g37760 Schrenkiella parvula
TAR369G0041 Trochodendron aralioides
TAR369G0923 Trochodendron aralioides
TAR622G0009 Trochodendron aralioides
THA.LOC104804915 Tarenaya hassleriana
Thecc.02G123600 Theobroma cacao
Thhalv10011177m.g Eutrema salsugineum
Thhalv10012090m.g Eutrema salsugineum
TPR.G38232 Trifolium pratense
TWI75G1044 Tripterygium wilfordii
unitig_61.g25998 Utricularia gibba
vmacro02128 Vaccinium macrocarpon
vmacro02129 Vaccinium macrocarpon
vmacro02130 Vaccinium macrocarpon
VMungo1309G0726 Vigna mungo
Zm00001eb216400 Zea mays

User provided reference genes

Program Settings