Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05800 Brassica napus
A01p37870 Brassica napus
A05p33270 Brassica napus
Aa31LG2G16910 Aethionema arabicum
Aa31LG8G3400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2080 Anthoceros agrestis
Actinidia13283 Actinidia chinensis
Actinidia21697 Actinidia chinensis
Ah.01g021790 Amaranthus hybridus
Ah.12g063470 Amaranthus hybridus
AL3G28950 Arabidopsis lyrata
AL7G19180 Arabidopsis lyrata
Aqoxy7G01502 Aquilegia oxysepala
Aqoxy7G01888 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9YJ8T1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MC48K1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0XIBX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0KW7U Arachis hypogaea
AT3G16250 Arabidopsis thaliana
AT4G32590 Arabidopsis thaliana
ATR0071G013 Amborella trichopoda
ATR0315G167 Amborella trichopoda
Atru.chr1.3469 Acer truncatum
Atru.chr7.2331 Acer truncatum
AUR62022164 Chenopodium quinoa
AUR62024848 Chenopodium quinoa
AUR62031872 Chenopodium quinoa
AUR62032371 Chenopodium quinoa
BcaB06g25714 Brassica carinata
BcaC05g28902 Brassica carinata
BcaC09g48595 Brassica carinata
BcaC09g52049 Brassica carinata
BolC1t00633H Brassica oleracea
BolC1t04771H Brassica oleracea
BolC5t33777H Brassica oleracea
BraA01t00549Z Brassica rapa
BraA01t03847Z Brassica rapa
BraA05t22152Z Brassica rapa
C01p06370 Brassica napus
C01p47980 Brassica napus
C05p50260 Brassica napus
CAN.G479.23 Capsicum annuum
CAN.G504.98 Capsicum annuum
CANSAT25G2597 Cannabis sativa
CANSAT56G2298 Cannabis sativa
CARHR091450 Cardamine hirsuta
CARHR240560 Cardamine hirsuta
Carub.0003s1600 Capsella rubella
Carub.0007s0797 Capsella rubella
Ca_01150_v3 Cicer arietinum L.
Ca_12912_v3 Cicer arietinum L.
Cc04_g02820 Coffea canephora
Cc04_g02830 Coffea canephora
Cc08_g08040 Coffea canephora
CDE05G0791 Ceratophyllum demersum
CDE05G0809 Ceratophyllum demersum
CDE07G1319 Ceratophyllum demersum
Cfa021483 Carpinus fangiana
Ciclev10009578m.g Citrus clementina
Ciclev10026544m.g Citrus clementina
CiPaw.02G147600 Carya illinoinensis
CiPaw.08G015100 Carya illinoinensis
ClCG08G012930 Citrullus lanatus
ClCG09G001820 Citrullus lanatus
COL.COLO4_24048 Corchorus olitorius
COL.COLO4_30469 Corchorus olitorius
Cpa.g.sc48.142 Carica papaya
Cpa.g.sc91.15 Carica papaya
Cre06.g291650 Chlamydomonas reinhardtii
CsaV3_2G031650 Cucumis sativus L.
CsaV3_7G033530 Cucumis sativus L.
CSS0008444 Camellia sinensis var. sinensis
CSS0019502 Camellia sinensis var. sinensis
CSS0034447 Camellia sinensis var. sinensis
CSS0036270 Camellia sinensis var. sinensis
CSS0044455 Camellia sinensis var. sinensis
CSS0049965 Camellia sinensis var. sinensis
DCAR_007683 Daucus carota
DCAR_016201 Daucus carota
Dinv30206 Davidia involucrata
Dinv30462 Davidia involucrata
Dinv38002 Davidia involucrata
Duzib168G2319 Durio zibethinus
Duzib192G0284 Durio zibethinus
ECA232G3797 Erigeron canadensis
EL10Ac2g02546 Beta vulgaris
EL10Ac9g22045 Beta vulgaris
Eucgr.C02841 Eucalyptus grandis
Eucgr.C02845 Eucalyptus grandis
Eucgr.C02852 Eucalyptus grandis
Eucgr.C02856 Eucalyptus grandis
Eucgr.F03055 Eucalyptus grandis
Eucgr.L02133 Eucalyptus grandis
FAN02G4426 Fragaria x ananassa
FAN05G3438 Fragaria x ananassa
FAN14G2886 Fragaria x ananassa
FAN15G2025 Fragaria x ananassa
FAN20G2251 Fragaria x ananassa
FAN24G3185 Fragaria x ananassa
FAN27G2734 Fragaria x ananassa
FvH4_2g30090 Fragaria vesca
FvH4_6g31980 Fragaria vesca
Glyma.13G356100 Glycine max
Glyma.14G128500 Glycine max
Glyma.15G018000 Glycine max
Glyma.17G205000 Glycine max
Gohir.A10G067200 Gossypium hirsutum
Gohir.A13G204100 Gossypium hirsutum
Gohir.D10G069000 Gossypium hirsutum
Gohir.D13G209400 Gossypium hirsutum
Gorai.011G072900 Gossypium raimondii
Gorai.013G238500 Gossypium raimondii
GSVIVG01017041001 Vitis vinifera
GSVIVG01035716001 Vitis vinifera
HanXRQChr07g0191431 Helianthus annuus
HanXRQChr09g0275971 Helianthus annuus
Haze_16336 Corylus avellana
Haze_21617 Corylus avellana
Hund31144 Selenicereus undatus
Hund31145 Selenicereus undatus
Lalb_Chr14g0373131 Lupinus albus
Lalb_Chr24g0402301 Lupinus albus
Lalb_Chr24g0402311 Lupinus albus
Lj3g0018342 Lotus japonicus
Lj5g0015290 Lotus japonicus
Lj8A611T46 Lonicera japonica
Lj9A510T88 Lonicera japonica
Lsat_1_v5_gn_4_101160 Lactuca sativa
Lsat_1_v5_gn_6_10760 Lactuca sativa
Manes.03G065300 Manihot esculenta
Manes.11G036400 Manihot esculenta
Mapoly0075s0083 Marchantia polymorpha
MBI04_g02614_MAGBIO Magnolia biondii
MBI04_g11926_MAGBIO Magnolia biondii
MBI04_g47370_MAGBIO Magnolia biondii
MCO10G010 Micromonas commoda
MD09G1207300 Malus domestica
MD15G1116000 Malus domestica
MD17G1188300 Malus domestica
Medtr1g011510 Medicago truncatula
Medtr2g101380 Medicago truncatula
MELO3C011216.2 Cucumis melo
MELO3C024264.2 Cucumis melo
Migut.E01491 Erythranthe guttata
Migut.I00927 Erythranthe guttata
MSTRG.11041 Avicennia marina
MSTRG.1644 Avicennia marina
Nitab4.5_0000486g0140 Nicotiana tabacum
Nitab4.5_0002520g0040 Nicotiana tabacum
Nitab4.5_0004637g0010 Nicotiana tabacum
Nitab4.5_0008664g0020 Nicotiana tabacum
Nn3g18157 Nelumbo nucifera
Nn8g39302 Nelumbo nucifera
Oeu024075.1 Olea europaea
Oeu024077.1 Olea europaea
Oeu045183.1 Olea europaea
Os05g0555300 Oryza sativa ssp. japonica
Os07g0489800 Oryza sativa ssp. japonica
Peaxi162Scf00632g00419 Petunia axillaris
Peaxi162Scf00818g00215 Petunia axillaris
PGR044G0983 Punica granatum
PGR102G1674 Punica granatum
PGSC0003DMG400001278 Solanum tuberosum
PGSC0003DMG400012224 Solanum tuberosum
Phvul.001G055300 Phaseolus vulgaris
Phvul.005G170200 Phaseolus vulgaris
Potri.001G186800 Populus trichocarpa
Potri.006G247300 Populus trichocarpa
Pp3c14_14470 Physcomitrium patens
PRCOL_00004215 Prasinoderma coloniale
Prupe.1G467300 Prunus persica
Prupe.3G063600 Prunus persica
Psat1g005360 Pisum sativum
Psat6g030720 Pisum sativum
PSO063G7455 Papaver somniferum
PSO210G2356 Papaver somniferum
PSO210G6452 Papaver somniferum
PSO782G1491 Papaver somniferum
QL05p021189 Quercus lobata
QL06p043845 Quercus lobata
QL12p031408 Quercus lobata
RcHm_v2.0_Chr2g0139561 Rosa chinensis
RcHm_v2.0_Chr6g0312831 Rosa chinensis
Rhsim02G0188100 Rhododendron simsii
Rhsim02G0188300 Rhododendron simsii
Rhsim08G0225500 Rhododendron simsii
Sabra01G0153600 Salix brachista
Sabra06G0193500 Salix brachista
Sc09g0008800 Simmondsia chinensis
Sed0003664 Sechium edule
Sed0014329 Sechium edule
Sed0018951 Sechium edule
Sed0027881 Sechium edule
SEGI_20700 Sequoiadendron giganteum
SGA_v2.0_scaffold187G40270 Striga asiatica
SMO146G0398 Selaginella moellendorffii
Solyc08g022140.1 Solanum lycopersicum
Solyc08g083360.3 Solanum lycopersicum
Sopen10g024690 Solanum pennellii
Sopen11g019030 Solanum pennellii
Sp3g14620 Schrenkiella parvula
Sp7g30360 Schrenkiella parvula
TAR626G1117 Trochodendron aralioides
TAR636G2854 Trochodendron aralioides
THA.LOC104803819 Tarenaya hassleriana
THA.LOC104817971 Tarenaya hassleriana
Thecc.06G095600 Theobroma cacao
Thecc.09G145000 Theobroma cacao
Thhalv10021523m.g Eutrema salsugineum
Thhalv10026415m.g Eutrema salsugineum
TPR.G20102 Trifolium pratense
TPR.G37231 Trifolium pratense
TWI12G0698 Tripterygium wilfordii
TWI34G0683 Tripterygium wilfordii
unitig_578.g16602 Utricularia gibba
unitig_748.g8097 Utricularia gibba
vmacro11122 Vaccinium macrocarpon
vmacro18873 Vaccinium macrocarpon
VMungo0647G0026 Vigna mungo
VMungo1080G0218 Vigna mungo
Zm00001eb002980 Zea mays
Zm00001eb105200 Zea mays
Zm00001eb167930 Zea mays
Zm00001eb295180 Zea mays
Zm00001eb321670 Zea mays

User provided reference genes

Program Settings