Gene: AT3G16250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G16250
  • Transcript Identifier AT3G16250.1
  • Gene Type Coding gene
  • Location Chr3 : 5507091-5508320 : negative

Gene Family Information

  • ID HOM05D003052
  • #Genes/#Species 225/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G16250.1
  • symbol PnsB3
  • Alias NDF4,NDH-dependent cyclic electron flow 1
  • full_name Photosynthetic NDH subcomplex B 3
  • uniprot Q9LU21

Descriptions

  • Description NDH-dependent cyclic electron flow 1
  • Computational description NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009773
IMP
Gene Ontologyphotosynthetic electron transport in photosystem I1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051537
IEA
GOA Database2 iron, 2 sulfur cluster binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane1
GO:0010598
IDA, IMP
Gene OntologyNAD(P)H dehydrogenase complex (plastoquinone)1
GO:0005829
HDA
Gene Ontologycytosol2
GO:0009536
IEA
GOA Databaseplastid
GO:0016020
IEA
GOA Databasemembrane
GO:0009579
IEA
GOA Databasethylakoid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012675 Beta-grasp domain superfamily
IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR036010 2Fe-2S ferredoxin-like superfamily
Mapman id Description
1.1.8.1.3.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB3/NDF4