Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p18200 Brassica napus
A06p35470 Brassica napus
A06p42880 Brassica napus
A06p42900 Brassica napus
A06p42910 Brassica napus
Aa31LG11G3900 Aethionema arabicum
Aa31LG1G2300 Aethionema arabicum
Aa31LG4G18050 Aethionema arabicum
Aa31sc296G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.126 Anthoceros agrestis
Actinidia08721 Actinidia chinensis
Actinidia34288 Actinidia chinensis
Ah.13g071050 Amaranthus hybridus
AL5G29400 Arabidopsis lyrata
AL6G36250 Arabidopsis lyrata
Aqoxy5G02912 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea
AT3G49560 Arabidopsis thaliana
AT5G24650 Arabidopsis thaliana
ATR0582G341 Amborella trichopoda
Atru.chr12.2500 Acer truncatum
Atru.chr12.2524 Acer truncatum
AUR62005947 Chenopodium quinoa
AUR62028118 Chenopodium quinoa
AUR62030652 Chenopodium quinoa
BcaB01g00697 Brassica carinata
BcaB08g34597 Brassica carinata
BcaB08g34598 Brassica carinata
BcaB08g34600 Brassica carinata
BcaB08g34601 Brassica carinata
BcaB08g34602 Brassica carinata
BcaC06g31150 Brassica carinata
BcaC06g31152 Brassica carinata
BcaC06g31154 Brassica carinata
BcaC06g31155 Brassica carinata
BcaC07g39417 Brassica carinata
BcaNung01249 Brassica carinata
BcaNung02005 Brassica carinata
BolC7t43925H Brassica oleracea
BolC7t43926H Brassica oleracea
BolC7t43927H Brassica oleracea
BolC7t43931H Brassica oleracea
BolC7t43940H Brassica oleracea
BolC7t44834H Brassica oleracea
BolC8t50072H Brassica oleracea
BraA06t24904Z Brassica rapa
BraA06t26470Z Brassica rapa
BraA06t27200Z Brassica rapa
C07p34110 Brassica napus
C07p34120 Brassica napus
C07p34140 Brassica napus
C07p34160 Brassica napus
C07p43070 Brassica napus
C08p05060 Brassica napus
C08p24540 Brassica napus
CAN.G303.60 Capsicum annuum
CANSAT21G0709 Cannabis sativa
CARHR158570 Cardamine hirsuta
CARHR188810 Cardamine hirsuta
Carub.0005s1589 Capsella rubella
Carub.0006s2250 Capsella rubella
Ca_16839_v3 Cicer arietinum L.
CBR_g48001 Chara braunii
Cc02_g00590 Coffea canephora
CDE02G1646 Ceratophyllum demersum
CDE02G1662 Ceratophyllum demersum
CDE06G0409 Ceratophyllum demersum
Ciclev10021773m.g Citrus clementina
CiPaw.05G208700 Carya illinoinensis
CiPaw.05G209100 Carya illinoinensis
CiPaw.06G038200 Carya illinoinensis
ClCG00G004180 Citrullus lanatus
ClCG01G000020 Citrullus lanatus
COL.COLO4_14400 Corchorus olitorius
Cpa.g.sc3.187 Carica papaya
Cpa.g.sc3.188 Carica papaya
Cre03.g183100 Chlamydomonas reinhardtii
CsaV3_5G000150 Cucumis sativus L.
CSS0003954 Camellia sinensis var. sinensis
CSS0041512 Camellia sinensis var. sinensis
DCAR_010557 Daucus carota
Dinv17276 Davidia involucrata
Dinv29191 Davidia involucrata
Duzib068G0518 Durio zibethinus
Duzib084G0455 Durio zibethinus
Duzib205G1477 Durio zibethinus
ECA232G4756 Erigeron canadensis
ECA248G0015 Erigeron canadensis
ECA248G2250 Erigeron canadensis
EL10Ac2g03371 Beta vulgaris
EL10Ac3g05130 Beta vulgaris
Eucgr.A00976 Eucalyptus grandis
Eucgr.K00480 Eucalyptus grandis
Eucgr.K00528 Eucalyptus grandis
FAN01G2324 Fragaria x ananassa
FAN03G3459 Fragaria x ananassa
FAN10G1538 Fragaria x ananassa
FAN10G3922 Fragaria x ananassa
FvH4_7g33330 Fragaria vesca
Glyma.04G225600 Glycine max
Glyma.06G139200 Glycine max
Gohir.A09G187100 Gossypium hirsutum
Gohir.A11G017100 Gossypium hirsutum
Gohir.A12G244400 Gossypium hirsutum
Gohir.D09G181900 Gossypium hirsutum
Gohir.D11G016900 Gossypium hirsutum
Gohir.D12G245300 Gossypium hirsutum
Gorai.006G203900 Gossypium raimondii
Gorai.007G017700 Gossypium raimondii
Gorai.008G262900 Gossypium raimondii
GSVIVG01038683001 Vitis vinifera
HanXRQChr01g0012351 Helianthus annuus
HanXRQChr10g0283991 Helianthus annuus
HanXRQChr11g0346131 Helianthus annuus
HanXRQChr11g0346471 Helianthus annuus
HanXRQChr15g0497021 Helianthus annuus
HanXRQChr16g0499771 Helianthus annuus
Haze_00335 Corylus avellana
Hma1.2p1_0115F.1_g055830 Hydrangea macrophylla
HPP92_007053 Vanilla planifolia
Lalb_Chr08g0239401 Lupinus albus
Lalb_Chr08g0239411 Lupinus albus
Lalb_Chr11g0067561 Lupinus albus
Lalb_Chr23g0272051 Lupinus albus
Lj1g0024936 Lotus japonicus
Lj3C891T18 Lonicera japonica
Lsat_1_v5_gn_0_9661 Lactuca sativa
Lsat_1_v5_gn_2_135421 Lactuca sativa
Lsat_1_v5_gn_2_3400 Lactuca sativa
Lsat_1_v5_gn_8_4220 Lactuca sativa
Manes.05G197500 Manihot esculenta
Mapoly0083s0018 Marchantia polymorpha
MBI07_g11061_MAGBIO Magnolia biondii
MCO01G667 Micromonas commoda
MD01G1231500 Malus domestica
MD07G1303500 Malus domestica
Medtr3g093380 Medicago truncatula
MELO3C005915.2 Cucumis melo
Migut.F00122 Erythranthe guttata
Migut.F00968 Erythranthe guttata
MSTRG.26952 Avicennia marina
Nitab4.5_0000021g0210 Nicotiana tabacum
Nitab4.5_0007121g0040 Nicotiana tabacum
Nn2g15903 Nelumbo nucifera
Nn7g35801 Nelumbo nucifera
Nn7g35804 Nelumbo nucifera
Oeu017358.1 Olea europaea
Oeu061044.1 Olea europaea
Os02g0526500 Oryza sativa ssp. japonica
Os04g0405100 Oryza sativa ssp. japonica
Peaxi162Scf01026g00260 Petunia axillaris
PGR042G2079 Punica granatum
PGR142G0210 Punica granatum
PGSC0003DMG400000572 Solanum tuberosum
Phvul.009G040400 Phaseolus vulgaris
Potri.012G004600 Populus trichocarpa
Potri.015G000600 Populus trichocarpa
Pp3c16_18078 Physcomitrium patens
Pp3c16_18085 Physcomitrium patens
Pp3c25_7060 Physcomitrium patens
PRCOL_00000888 Prasinoderma coloniale
Prupe.2G322200 Prunus persica
Psat1g196200 Pisum sativum
Psat1g196240 Pisum sativum
Psat5g071120 Pisum sativum
Psat6g092160 Pisum sativum
PSO017G0083 Papaver somniferum
PSO017G1017 Papaver somniferum
PSO170G6331 Papaver somniferum
PSO210G3039 Papaver somniferum
PSO339G1325 Papaver somniferum
PSO339G1467 Papaver somniferum
PSO339G1784 Papaver somniferum
PSO339G1829 Papaver somniferum
PSO339G2603 Papaver somniferum
PSO339G5543 Papaver somniferum
PSO339G5652 Papaver somniferum
PSO339G5858 Papaver somniferum
PSO339G6351 Papaver somniferum
PSO384G5006 Papaver somniferum
PSO478G2764 Papaver somniferum
PSO541G2030 Papaver somniferum
PSO541G2887 Papaver somniferum
PSO675G3559 Papaver somniferum
PSO675G9013 Papaver somniferum
PSO724G0429 Papaver somniferum
PSO729G0102 Papaver somniferum
PSO729G0279 Papaver somniferum
PSO782G4498 Papaver somniferum
PSO832G1145 Papaver somniferum
PSO832G4292 Papaver somniferum
QL09p005993 Quercus lobata
RcHm_v2.0_Chr1g0383311 Rosa chinensis
Rhsim03G0218500 Rhododendron simsii
Sabra15G0000400 Salix brachista
SalBow4G0431 Salvia bowleyana
Sc19g0000360 Simmondsia chinensis
Sed0009908 Sechium edule
Sed0018717 Sechium edule
SEGI_07138 Sequoiadendron giganteum
SEGI_14341 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38214 Striga asiatica
SMO356G0102 Selaginella moellendorffii
Solyc03g079940.3 Solanum lycopersicum
Sopen03g027480 Solanum pennellii
Sp2g22740 Schrenkiella parvula
Sp5g12550 Schrenkiella parvula
TAR374G1266 Trochodendron aralioides
TAR375G0624 Trochodendron aralioides
THA.LOC104798993 Tarenaya hassleriana
THA.LOC104814958 Tarenaya hassleriana
Thecc.03G212100 Theobroma cacao
Thhalv10004788m.g Eutrema salsugineum
Thhalv10010930m.g Eutrema salsugineum
TPR.G35918 Trifolium pratense
TWI39G0588 Tripterygium wilfordii
unitig_52.g16865 Utricularia gibba
unitig_62.g23858 Utricularia gibba
unitig_62.g23859 Utricularia gibba
unitig_64.g29777 Utricularia gibba
vmacro06209 Vaccinium macrocarpon
vmacro06475 Vaccinium macrocarpon
VMungo1309G0595 Vigna mungo
Zm00001eb084410 Zea mays
Zm00001eb181270 Zea mays
Zm00001eb187080 Zea mays
Zm00001eb242440 Zea mays

User provided reference genes

Program Settings