Gene: AT3G49560
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G49560
- Transcript Identifier AT3G49560.1
- Gene Type Coding gene
- Location Chr3 : 18370644-18371821 : positive
Gene Family Information
- ID HOM05D003018
- #Genes/#Species 228/97
- Phylogenetic origin
- ID ORTHO05D003402
- #Genes/#Species 226/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G49560.1
- Alias HP30,hypothetical protein 30
- uniprot Q9SCK3
Descriptions
- Description Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
- Computational description Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterile alpha motif, type 1 (InterPro:IPR021129), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT5G24650.1); Has 96 Blast hits to 94 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045039 | IEA | Gene Ontology | protein insertion into mitochondrial inner membrane | |
| GO:0045039 | IEA | InterPro | protein insertion into mitochondrial inner membrane | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0071806 | IEA | GOA Database | protein transmembrane transport | |
| GO:0045036 | IMP IBA | Gene Ontology | protein targeting to chloroplast | 1 2 |
| GO:0016031 | IGI | Gene Ontology | tRNA import into mitochondrion | 3 |
| GO:0007005 | IGI | Gene Ontology | mitochondrion organization | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008320 | IBA | Gene Ontology | protein transmembrane transporter activity | 1 |
| GO:0043621 | IPI | Gene Ontology | protein self-association | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009706 | IEA | GOA Database | chloroplast inner membrane | |
| GO:0009706 | IDA IBA | Gene Ontology | chloroplast inner membrane | 1 2 |
| GO:0042721 | IEA | InterPro | TIM22 mitochondrial import inner membrane insertion complex | |
| GO:0009528 | IEA | GOA Database | plastid inner membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA | Gene Ontology | chloroplast | 4 5 |
| GO:0009536 | IDA IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 6 |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 7 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 8 |
| GO:0005739 | IDA | Gene Ontology | mitochondrion | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |