Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20490 Brassica napus
A06p03770 Brassica napus
Aa31LG10G4280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1872 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2459 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3495 Anthoceros agrestis
Actinidia00429 Actinidia chinensis
Actinidia12937 Actinidia chinensis
Actinidia12938 Actinidia chinensis
Ah.01g017850 Amaranthus hybridus
AL1G57220 Arabidopsis lyrata
Aqoxy5G01197 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DD1GZC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U584NJ Arachis hypogaea
AT1G49770 Arabidopsis thaliana
ATR0584G279 Amborella trichopoda
Atru.chr1.3693 Acer truncatum
Atru.chr13.721 Acer truncatum
AUR62010242 Chenopodium quinoa
AUR62013224 Chenopodium quinoa
BcaB02g11106 Brassica carinata
BcaB07g33661 Brassica carinata
BcaC05g27473 Brassica carinata
BcaC08g43150 Brassica carinata
BolC5t32166H Brassica oleracea
BolC6t35563H Brassica oleracea
BraA05t20958Z Brassica rapa
BraA06t23582Z Brassica rapa
C05p34380 Brassica napus
C06p04340 Brassica napus
CAN.G1041.44 Capsicum annuum
CAN.G1041.45 Capsicum annuum
CAN.G1041.46 Capsicum annuum
CAN.G1041.50 Capsicum annuum
CAN.G1231.38 Capsicum annuum
CAN.G1838.1 Capsicum annuum
CAN.G1838.2 Capsicum annuum
CANSAT25G0518 Cannabis sativa
CARHR039820 Cardamine hirsuta
CARHR039830 Cardamine hirsuta
CARHR039840 Cardamine hirsuta
Carub.0001s3897 Capsella rubella
Ca_18705_v3 Cicer arietinum L.
Cc02_g18940 Coffea canephora
CDE02G2363 Ceratophyllum demersum
Cfa004537 Carpinus fangiana
Ciclev10003973m.g Citrus clementina
Ciclev10030106m.g Citrus clementina
CiPaw.06G171700 Carya illinoinensis
ClCG02G005950 Citrullus lanatus
COL.COLO4_26545 Corchorus olitorius
COL.COLO4_32636 Corchorus olitorius
Cpa.g.sc1383.2 Carica papaya
Cpa.g.sc200.36 Carica papaya
Cpa.g.sc21.177 Carica papaya
CsaV3_7G008580 Cucumis sativus L.
CSS0015958 Camellia sinensis var. sinensis
CSS0020055 Camellia sinensis var. sinensis
CSS0020374 Camellia sinensis var. sinensis
CSS0023387 Camellia sinensis var. sinensis
CSS0044289 Camellia sinensis var. sinensis
DCAR_022014 Daucus carota
DCAR_029090 Daucus carota
Dinv15730 Davidia involucrata
Dinv42167 Davidia involucrata
Duzib132G1208 Durio zibethinus
ECA234G2113 Erigeron canadensis
ECA240G1347 Erigeron canadensis
EL10Ac9g21584 Beta vulgaris
Eucgr.G01493 Eucalyptus grandis
FAN15G0327 Fragaria x ananassa
FAN15G1137 Fragaria x ananassa
FAN20G0617 Fragaria x ananassa
FAN20G1742 Fragaria x ananassa
FAN24G2463 Fragaria x ananassa
FvH4_2g05810 Fragaria vesca
Glyma.02G103100 Glycine max
Glyma.02G103200 Glycine max
Gohir.A01G122633 Gossypium hirsutum
Gohir.A01G122666 Gossypium hirsutum
Gohir.A03G188350 Gossypium hirsutum
Gohir.A13G041500 Gossypium hirsutum
Gohir.D01G110400 Gossypium hirsutum
Gohir.D02G209050 Gossypium hirsutum
Gohir.D13G040200 Gossypium hirsutum
Gorai.002G135000 Gossypium raimondii
Gorai.013G045100 Gossypium raimondii
GSVIVG01009469001 Vitis vinifera
GSVIVG01031718001 Vitis vinifera
HanXRQChr03g0068661 Helianthus annuus
HanXRQChr03g0074841 Helianthus annuus
Haze_10098 Corylus avellana
Hma1.2p1_0370F.1_g137650 Hydrangea macrophylla
HPP92_002772 Vanilla planifolia
Hund00113 Selenicereus undatus
Lalb_Chr05g0224851 Lupinus albus
Lalb_Chr09g0334781 Lupinus albus
Lalb_Chr20g0108391 Lupinus albus
Lalb_Chr20g0108401 Lupinus albus
Lj4g0009952 Lotus japonicus
Lj4g0025998 Lotus japonicus
Lj9C355T10 Lonicera japonica
Lj9C357T7 Lonicera japonica
Lsat_1_v5_gn_9_110961 Lactuca sativa
Manes.05G175600 Manihot esculenta
Manes.10G080300 Manihot esculenta
Manes.18G039500 Manihot esculenta
Mapoly0012s0202 Marchantia polymorpha
Mapoly0126s0029 Marchantia polymorpha
MBI17_g08637_MAGBIO Magnolia biondii
MD05G1083300 Malus domestica
MD15G1079900 Malus domestica
Medtr4g081980 Medicago truncatula
Medtr4g085660 Medicago truncatula
Medtr4g085700 Medicago truncatula
MELO3C018451.2 Cucumis melo
Migut.B00361 Erythranthe guttata
Migut.N01183 Erythranthe guttata
Nitab4.5_0000292g0060 Nicotiana tabacum
Nitab4.5_0001230g0010 Nicotiana tabacum
Nitab4.5_0001428g0060 Nicotiana tabacum
Nitab4.5_0007431g0020 Nicotiana tabacum
Nn1g04801 Nelumbo nucifera
Oeu001777.1 Olea europaea
Oeu001780.1 Olea europaea
Oeu007296.1 Olea europaea
Oeu013724.1 Olea europaea
Os02g0548100 Oryza sativa ssp. japonica
Os04g0429300 Oryza sativa ssp. japonica
Os04g0429400 Oryza sativa ssp. japonica
Peaxi162Scf00016g02026 Petunia axillaris
Peaxi162Scf00152g00131 Petunia axillaris
PGR042G3868 Punica granatum
PGSC0003DMG400014979 Solanum tuberosum
PGSC0003DMG400025780 Solanum tuberosum
PGSC0003DMG400025781 Solanum tuberosum
PGSC0003DMG400025782 Solanum tuberosum
PGSC0003DMG400025783 Solanum tuberosum
PGSC0003DMG400045009 Solanum tuberosum
Phvul.003G048000 Phaseolus vulgaris
Phvul.003G048100 Phaseolus vulgaris
Potri.001G305100 Populus trichocarpa
Potri.014G025900 Populus trichocarpa
Pp3c13_2080 Physcomitrium patens
Pp3c1_8930 Physcomitrium patens
Pp3c26_15000 Physcomitrium patens
Pp3c2_31440 Physcomitrium patens
Pp3c3_810 Physcomitrium patens
Prupe.1G432900 Prunus persica
Prupe.8G127700 Prunus persica
Psat0s1066g0040 Pisum sativum
Psat0s1067g0040 Pisum sativum
Psat0s1067g0080 Pisum sativum
Psat0s1067g0120 Pisum sativum
Psat0s5079g0040 Pisum sativum
Psat0s5079g0080 Pisum sativum
Psat0s672g0040 Pisum sativum
Psat0s7144g0040 Pisum sativum
Psat0s7144g0080 Pisum sativum
Psat1g001360 Pisum sativum
Psat7g090720 Pisum sativum
Psat7g126040 Pisum sativum
Psat7g126080 Pisum sativum
Psat7g178280 Pisum sativum
Psat7g224920 Pisum sativum
Psat7g225560 Pisum sativum
PSO170G5216 Papaver somniferum
PSO210G4688 Papaver somniferum
QL02p004396 Quercus lobata
QL11p034987 Quercus lobata
RcHm_v2.0_Chr6g0257881 Rosa chinensis
RcHm_v2.0_Chr6g0308241 Rosa chinensis
Rhsim11G0164600 Rhododendron simsii
Sabra09G0076200 Salix brachista
Sabra14G0017800 Salix brachista
SalBow3G0638 Salvia bowleyana
SalBow6G1753 Salvia bowleyana
SalBow6G6778 Salvia bowleyana
Sc08g0001710 Simmondsia chinensis
Sed0005157 Sechium edule
Sed0010940 Sechium edule
SEGI_00209 Sequoiadendron giganteum
SEGI_28244 Sequoiadendron giganteum
SEGI_29446 Sequoiadendron giganteum
SGA_v2.0_scaffold393G50697 Striga asiatica
SMO147G0123 Selaginella moellendorffii
SMO240G0043 Selaginella moellendorffii
SMO270G0033 Selaginella moellendorffii
Solyc01g014910.2 Solanum lycopersicum
Solyc01g014960.1 Solanum lycopersicum
Solyc01g020160.1 Solanum lycopersicum
Solyc01g020170.2 Solanum lycopersicum
Solyc01g020180.1 Solanum lycopersicum
Solyc01g057300.2 Solanum lycopersicum
Solyc01g107950.2 Solanum lycopersicum
Solyc01g107960.4 Solanum lycopersicum
Solyc01g107970.1 Solanum lycopersicum
Solyc09g018130.3 Solanum lycopersicum
Solyc09g018150.1 Solanum lycopersicum
Solyc12g036430.3 Solanum lycopersicum
Sopen01g009900 Solanum pennellii
Sopen01g010070 Solanum pennellii
Sopen01g010120 Solanum pennellii
Sopen01g021920 Solanum pennellii
Sopen01g050130 Solanum pennellii
Sopen01g050150 Solanum pennellii
Sopen01g050160 Solanum pennellii
Sopen01g050170 Solanum pennellii
Sopen09g010690 Solanum pennellii
Sopen09g010770 Solanum pennellii
Sopen12g016670 Solanum pennellii
Sp1g36660 Schrenkiella parvula
TAR376G0856 Trochodendron aralioides
TAR381G0350 Trochodendron aralioides
THA.LOC104806046 Tarenaya hassleriana
Thecc.02G102900 Theobroma cacao
Thecc.08G003900 Theobroma cacao
Thhalv10012185m.g Eutrema salsugineum
TPR.G12728 Trifolium pratense
TWI36G1467 Tripterygium wilfordii
TWI56G0629 Tripterygium wilfordii
TWI79G0261 Tripterygium wilfordii
TWI79G0711 Tripterygium wilfordii
unitig_0.g90 Utricularia gibba
vmacro02036 Vaccinium macrocarpon
VMungo0251G1556 Vigna mungo
VMungo0251G3056 Vigna mungo
Zm00001eb082900 Zea mays
Zm00001eb261420 Zea mays

User provided reference genes

Program Settings