Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p35720 Brassica napus
Aa31LG6G11900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1205 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.318 Anthoceros agrestis
Actinidia33693 Actinidia chinensis
Actinidia33712 Actinidia chinensis
AL1G44720 Arabidopsis lyrata
AL1G44740 Arabidopsis lyrata
Aqoxy1G01512 Aquilegia oxysepala
Aqoxy7G01281 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.28UEMM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.447SJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57FUCZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7QV6JY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DEBH8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT355A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYLU20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SN2S9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WH7KDQ Arachis hypogaea
AT1G30660 Arabidopsis thaliana
AT1G30680 Arabidopsis thaliana
ATR0681G109 Amborella trichopoda
ATR0763G210 Amborella trichopoda
Atru.chr10.698 Acer truncatum
Atru.chr10.699 Acer truncatum
Atru.chr2.1567 Acer truncatum
Atru.chr2.1568 Acer truncatum
AUR62025821 Chenopodium quinoa
AUR62029886 Chenopodium quinoa
BcaB03g13821 Brassica carinata
BcaB07g32707 Brassica carinata
BcaC05g27092 Brassica carinata
BolC5t31702H Brassica oleracea
BraA09t39097Z Brassica rapa
C05p29740 Brassica napus
CAN.G39.23 Capsicum annuum
CAN.G39.24 Capsicum annuum
CAN.G39.25 Capsicum annuum
CAN.G660.46 Capsicum annuum
CANSAT35G1991 Cannabis sativa
CANSAT64G0697 Cannabis sativa
CARHR030150 Cardamine hirsuta
Carub.0001s2892 Capsella rubella
Carub.0001s2896 Capsella rubella
Ca_00892_v3 Cicer arietinum L.
Ca_25498_v3 Cicer arietinum L.
CBR_g16946 Chara braunii
CBR_g38556 Chara braunii
CBR_g57959 Chara braunii
Cc02_g32870 Coffea canephora
Cc09_g07360 Coffea canephora
CDE01G0377 Ceratophyllum demersum
CDE02G0274 Ceratophyllum demersum
Cfa000776 Carpinus fangiana
Cfa023567 Carpinus fangiana
Ciclev10014667m.g Citrus clementina
Ciclev10015609m.g Citrus clementina
CiPaw.03G113700 Carya illinoinensis
CiPaw.09G146400 Carya illinoinensis
ClCG01G009320 Citrullus lanatus
ClCG03G008470 Citrullus lanatus
ClCG03G008480 Citrullus lanatus
ClCG03G008500 Citrullus lanatus
COL.COLO4_22894 Corchorus olitorius
COL.COLO4_22895 Corchorus olitorius
Cpa.g.sc489.1 Carica papaya
Cre12.g503150 Chlamydomonas reinhardtii
Cre12.g514950 Chlamydomonas reinhardtii
CsaV3_1G037560 Cucumis sativus L.
CsaV3_1G037590 Cucumis sativus L.
CSS0037242 Camellia sinensis var. sinensis
CSS0042083 Camellia sinensis var. sinensis
DCAR_000835 Daucus carota
DCAR_007819 Daucus carota
DCAR_007820 Daucus carota
Dinv08829 Davidia involucrata
Dinv26204 Davidia involucrata
Duzib160G0679 Durio zibethinus
Duzib235G1093 Durio zibethinus
ECA233G1693 Erigeron canadensis
ECA233G3161 Erigeron canadensis
ECA248G0148 Erigeron canadensis
EL10Ac8g19523 Beta vulgaris
Eucgr.D01012 Eucalyptus grandis
Eucgr.D01628 Eucalyptus grandis
FAN16G0127 Fragaria x ananassa
FAN16G1739 Fragaria x ananassa
FAN21G2172 Fragaria x ananassa
FAN21G3010 Fragaria x ananassa
FAN21G3776 Fragaria x ananassa
FAN25G1216 Fragaria x ananassa
FAN25G1988 Fragaria x ananassa
FvH4_3g11200 Fragaria vesca
FvH4_3g11220 Fragaria vesca
Glyma.09G028600 Glycine max
Glyma.09G028800 Glycine max
Glyma.15G134500 Glycine max
Gohir.A05G112501 Gossypium hirsutum
Gohir.A12G108800 Gossypium hirsutum
Gohir.D05G112900 Gossypium hirsutum
Gohir.D05G113000 Gossypium hirsutum
Gohir.D12G111800 Gossypium hirsutum
Gorai.008G121200 Gossypium raimondii
Gorai.009G117100 Gossypium raimondii
Gorai.009G157500 Gossypium raimondii
GSVIVG01008778001 Vitis vinifera
GSVIVG01021728001 Vitis vinifera
GSVIVG01021741001 Vitis vinifera
GSVIVG01037928001 Vitis vinifera
HanXRQChr01g0020621 Helianthus annuus
HanXRQChr01g0020641 Helianthus annuus
HanXRQChr04g0104351 Helianthus annuus
HanXRQChr11g0340941 Helianthus annuus
HanXRQChr17g0565071 Helianthus annuus
Haze_05935 Corylus avellana
Haze_13590 Corylus avellana
Haze_13591 Corylus avellana
Haze_13592 Corylus avellana
Hma1.2p1_1413F.1_g281810 Hydrangea macrophylla
HPP92_005928 Vanilla planifolia
HPP92_013208 Vanilla planifolia
Lalb_Chr15g0088941 Lupinus albus
Lalb_Chr18g0058241 Lupinus albus
Lalb_Chr18g0058251 Lupinus albus
Lj1A1159T86 Lonicera japonica
Lj1A1159T87 Lonicera japonica
Lj1C1159T8 Lonicera japonica
Lj2A336T37 Lonicera japonica
Lj6g0000719 Lotus japonicus
Lj6g0020929 Lotus japonicus
Lsat_1_v5_gn_1_91720 Lactuca sativa
Lsat_1_v5_gn_1_91780 Lactuca sativa
Lsat_1_v5_gn_8_128321 Lactuca sativa
Manes.09G088066 Manihot esculenta
Manes.14G125700 Manihot esculenta
Mapoly0003s0305 Marchantia polymorpha
MBI02_g32311_MAGBIO Magnolia biondii
MBI05_g19582_MAGBIO Magnolia biondii
MCO14G370 Micromonas commoda
MD05G1265600 Malus domestica
MD05G1265800 Malus domestica
MD10G1243800 Malus domestica
Medtr2g031620 Medicago truncatula
Medtr2g031740 Medicago truncatula
Medtr5g099220 Medicago truncatula
MELO3C002865.2 Cucumis melo
MELO3C035679.2 Cucumis melo
Migut.M01920 Erythranthe guttata
Migut.M01921 Erythranthe guttata
MSTRG.7558 Avicennia marina
Nitab4.5_0000076g0040 Nicotiana tabacum
Nitab4.5_0001181g0080 Nicotiana tabacum
Nitab4.5_0002005g0070 Nicotiana tabacum
Nitab4.5_0002005g0080 Nicotiana tabacum
Nitab4.5_0011416g0030 Nicotiana tabacum
Nn7g37799 Nelumbo nucifera
Oeu008965.1 Olea europaea
Oeu058493.2 Olea europaea
Oeu060320.2 Olea europaea
Os06g0671700 Oryza sativa ssp. japonica
Peaxi162Scf00155g00316 Petunia axillaris
Peaxi162Scf00701g00055 Petunia axillaris
PGR044G1782 Punica granatum
PGSC0003DMG400021105 Solanum tuberosum
Phvul.006G124200 Phaseolus vulgaris
Phvul.006G124400 Phaseolus vulgaris
Potri.001G461200 Populus trichocarpa
Potri.001G461300 Populus trichocarpa
Pp3c12_26070 Physcomitrium patens
Pp3c21_10530 Physcomitrium patens
Pp3c21_10540 Physcomitrium patens
PRCOL_00000580 Prasinoderma coloniale
PRCOL_00003596 Prasinoderma coloniale
Prupe.4G099700 Prunus persica
Prupe.4G099900 Prunus persica
Psat1g164720 Pisum sativum
Psat1g164800 Pisum sativum
PSO063G4114 Papaver somniferum
PSO541G5492 Papaver somniferum
PSO675G7488 Papaver somniferum
QL03p057306 Quercus lobata
QL05p064497 Quercus lobata
RcHm_v2.0_Chr5g0018141 Rosa chinensis
RcHm_v2.0_Chr5g0018171 Rosa chinensis
Rhsim13G0124600 Rhododendron simsii
Rhsim13G0124700 Rhododendron simsii
Sabra16G0312700 Salix brachista
Sabra16G0312800 Salix brachista
Sabra16G0312900 Salix brachista
Sabra16G0313000 Salix brachista
SalBow8G1512 Salvia bowleyana
SalBow8G1795 Salvia bowleyana
SalBow8G3270 Salvia bowleyana
SalBow8G4789 Salvia bowleyana
Sc10g0009650 Simmondsia chinensis
Sed0001268 Sechium edule
Sed0021502 Sechium edule
SEGI_14938 Sequoiadendron giganteum
SEGI_26502 Sequoiadendron giganteum
SEGI_37953 Sequoiadendron giganteum
SEGI_40021 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00291 Striga asiatica
SGA_v2.0_scaffold223G42877 Striga asiatica
SGA_v2.0_scaffold306G48030 Striga asiatica
SHI24823 Sapria himalayana
SMO236G0116 Selaginella moellendorffii
SMO364G0389 Selaginella moellendorffii
Solyc02g022830.3 Solanum lycopersicum
Solyc02g070220.3 Solanum lycopersicum
Solyc02g070230.2 Solanum lycopersicum
Sopen02g006420 Solanum pennellii
Sopen02g019320 Solanum pennellii
Sp1g26580 Schrenkiella parvula
TAR626G0717 Trochodendron aralioides
THA.LOC104798583 Tarenaya hassleriana
Thecc.06G011100 Theobroma cacao
Thecc.06G011200 Theobroma cacao
Thhalv10006950m.g Eutrema salsugineum
TPR.G15179 Trifolium pratense
TPR.G8027 Trifolium pratense
TWI15G0228 Tripterygium wilfordii
TWI63G0820 Tripterygium wilfordii
unitig_92.g28176 Utricularia gibba
unitig_92.g28180 Utricularia gibba
unitig_92.g28223 Utricularia gibba
vmacro02674 Vaccinium macrocarpon
vmacro03472 Vaccinium macrocarpon
VMungo0540G1323 Vigna mungo
Zm00001eb274090 Zea mays

User provided reference genes

Program Settings