Gene: Sopen02g006420

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g006420
  • Transcript Identifier Sopen02g006420.2
  • Gene Type Coding gene
  • Location Spenn-ch02 : 17818029-17849503 : positive

Gene Family Information

  • ID HOM05D003008
  • #Genes/#Species 229/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g006420.2

Descriptions

  • Description toprim domain-containing protein | FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding | INVOLVED IN: DNA replication, DNA metabolic process | CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup , DNA helicase, DnaB-like, C-terminal , Toprim domain | BEST Arabidopsis thaliana protein match is: nucleic acid binding, nucleic acid binding
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0009260
ISO
PLAZA Integrative Orthologyribonucleotide biosynthetic process AT1G30680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
IEA
InterProDNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0043139
IEA
InterPro5'-3' DNA helicase activity
GO:0003896
ISO
PLAZA Integrative OrthologyDNA primase activity AT1G30680
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G30680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006171 TOPRIM domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007694 DNA helicase, DnaB-like, C-terminal
IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain
IPR027032 Twinkle-like protein
Mapman id Description
13.5.2 Cell cycle organisation.organellar DNA replication.DNA primase and helicase (TWINKLE)