Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18810 Brassica napus
A06p01670 Brassica napus
A06p11540 Brassica napus
A09p61380 Brassica napus
Aa31LG10G2310 Aethionema arabicum
Aa31LG7G210 Aethionema arabicum
Aa31LG8G2820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.51 Anthoceros agrestis
Actinidia08352 Actinidia chinensis
Actinidia08818 Actinidia chinensis
Actinidia16003 Actinidia chinensis
Actinidia22020 Actinidia chinensis
Ah.14g081020 Amaranthus hybridus
Ah.14g081030 Amaranthus hybridus
AL1G27590 Arabidopsis lyrata
AL1G61050 Arabidopsis lyrata
AL3G28250 Arabidopsis lyrata
Aqoxy7G02012 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NTHQ1E Arachis hypogaea
AT1G15470 Arabidopsis thaliana
AT1G52730 Arabidopsis thaliana
AT3G15610 Arabidopsis thaliana
ATR0716G019 Amborella trichopoda
Atru.chr1.3151 Acer truncatum
Atru.chr7.1250 Acer truncatum
AUR62011062 Chenopodium quinoa
AUR62033439 Chenopodium quinoa
BcaB03g14537 Brassica carinata
BcaB04g17141 Brassica carinata
BcaC07g41498 Brassica carinata
BcaC07g41499 Brassica carinata
BcaC08g43447 Brassica carinata
BcaC08g44014 Brassica carinata
BolC5t30100H Brassica oleracea
BolC6t35899H Brassica oleracea
BolC6t36601H Brassica oleracea
BolC8t52040H Brassica oleracea
BraA05t20778Z Brassica rapa
BraA06t23385Z Brassica rapa
BraA06t24328Z Brassica rapa
BraA09t41508Z Brassica rapa
C05p13640 Brassica napus
C06p08180 Brassica napus
C06p14250 Brassica napus
C08p44930 Brassica napus
CANSAT56G0227 Cannabis sativa
CARHR016020 Cardamine hirsuta
CARHR042870 Cardamine hirsuta
CARHR090700 Cardamine hirsuta
Carub.0001s1526 Capsella rubella
Carub.0001s4181 Capsella rubella
Carub.0003s1536 Capsella rubella
CBR_g41412 Chara braunii
Cc04_g03860 Coffea canephora
Cc06_g09050 Coffea canephora
CDE01G0326 Ceratophyllum demersum
CDE02G4524 Ceratophyllum demersum
CDE04G0246 Ceratophyllum demersum
Cfa003323 Carpinus fangiana
Ciclev10008796m.g Citrus clementina
Ciclev10025975m.g Citrus clementina
CiPaw.04G168700 Carya illinoinensis
ClCG06G010720 Citrullus lanatus
COL.COLO4_12868 Corchorus olitorius
COL.COLO4_34985 Corchorus olitorius
Cpa.g.sc10.214 Carica papaya
Cpa.g.sc10.216 Carica papaya
Cre06.g302750 Chlamydomonas reinhardtii
CsaV3_1G031140 Cucumis sativus L.
CSS0036684 Camellia sinensis var. sinensis
DCAR_014855 Daucus carota
DCAR_021326 Daucus carota
DCAR_025471 Daucus carota
Dinv30557 Davidia involucrata
Dinv36578 Davidia involucrata
Dinv38082 Davidia involucrata
Duzib150G0684 Durio zibethinus
Duzib150G0978 Durio zibethinus
Duzib168G0422 Durio zibethinus
Duzib187G1875 Durio zibethinus
Duzib235G0973 Durio zibethinus
ECA232G1270 Erigeron canadensis
EL10Ac8g18579 Beta vulgaris
Eucgr.F02555 Eucalyptus grandis
FAN19G1570 Fragaria x ananassa
FAN23G1452 Fragaria x ananassa
FAN26G2460 Fragaria x ananassa
FAN28G0168 Fragaria x ananassa
FvH4_1g03990 Fragaria vesca
Glyma.05G010900 Glycine max
Glyma.17G118600 Glycine max
Gohir.A02G123800 Gossypium hirsutum
Gohir.A05G019600 Gossypium hirsutum
Gohir.A06G058700 Gossypium hirsutum
Gohir.A08G240000 Gossypium hirsutum
Gohir.A10G077600 Gossypium hirsutum
Gohir.D03G066000 Gossypium hirsutum
Gohir.D05G020700 Gossypium hirsutum
Gohir.D06G057000 Gossypium hirsutum
Gohir.D10G074000 Gossypium hirsutum
Gorai.002G056400 Gossypium raimondii
Gorai.004G278600 Gossypium raimondii
Gorai.009G020900 Gossypium raimondii
Gorai.010G066700 Gossypium raimondii
Gorai.011G079800 Gossypium raimondii
GSVIVG01015473001 Vitis vinifera
GSVIVG01017219001 Vitis vinifera
HanXRQChr03g0081351 Helianthus annuus
HanXRQChr13g0388351 Helianthus annuus
HanXRQChr16g0500621 Helianthus annuus
Haze_25639 Corylus avellana
Haze_25644 Corylus avellana
Haze_26340 Corylus avellana
Hma1.2p1_0317F.1_g123420 Hydrangea macrophylla
Hma1.2p1_0515F.1_g170330 Hydrangea macrophylla
HPP92_000658 Vanilla planifolia
HPP92_000659 Vanilla planifolia
HPP92_000688 Vanilla planifolia
HPP92_002795 Vanilla planifolia
Hund26461 Selenicereus undatus
Lalb_Chr07g0178721 Lupinus albus
Lalb_Chr12g0197701 Lupinus albus
Lalb_Chr13g0302141 Lupinus albus
Lalb_Chr23g0275231 Lupinus albus
Lj1g0012756 Lotus japonicus
Lj4g0006996 Lotus japonicus
Lj5A67T59 Lonicera japonica
Lj9A503G37 Lonicera japonica
Lsat_1_v5_gn_1_33661 Lactuca sativa
Lsat_1_v5_gn_4_104701 Lactuca sativa
Lsat_1_v5_gn_6_80681 Lactuca sativa
Manes.04G118500 Manihot esculenta
Manes.06G050900 Manihot esculenta
Manes.11G049000 Manihot esculenta
Mapoly0024s0081 Marchantia polymorpha
MBI04_g00948_MAGBIO Magnolia biondii
MCO15G516 Micromonas commoda
MD00G1025600 Malus domestica
MD02G1038200 Malus domestica
MD15G1178400 Malus domestica
Medtr2g054920 Medicago truncatula
MELO3C026625.2 Cucumis melo
Migut.D01046 Erythranthe guttata
Migut.I00811 Erythranthe guttata
MSTRG.22719 Avicennia marina
Nitab4.5_0000279g0010 Nicotiana tabacum
Nitab4.5_0000410g0410 Nicotiana tabacum
Nitab4.5_0004483g0010 Nicotiana tabacum
Nitab4.5_0005786g0010 Nicotiana tabacum
Nn8g39349 Nelumbo nucifera
Oeu000436.1 Olea europaea
Oeu014847.1 Olea europaea
Oeu020519.1 Olea europaea
Oeu052306.1 Olea europaea
Os02g0205400 Oryza sativa ssp. japonica
Os06g0598900 Oryza sativa ssp. japonica
Peaxi162Scf00015g00449 Petunia axillaris
Peaxi162Scf00361g00912 Petunia axillaris
PGR102G2844 Punica granatum
PGSC0003DMG400005609 Solanum tuberosum
Phvul.003G160500 Phaseolus vulgaris
Potri.001G174600 Populus trichocarpa
Potri.003G059500 Populus trichocarpa
Pp3c13_19430 Physcomitrium patens
Pp3c26_8130 Physcomitrium patens
Pp3c3_13590 Physcomitrium patens
PRCOL_00004627 Prasinoderma coloniale
Prupe.7G237000 Prunus persica
Psat1g026320 Pisum sativum
PSO210G6896 Papaver somniferum
PSO210G7221 Papaver somniferum
PSO242G0005 Papaver somniferum
QL02p087078 Quercus lobata
QL05p027149 Quercus lobata
RcHm_v2.0_Chr2g0089471 Rosa chinensis
RcHm_v2.0_Chr5g0013651 Rosa chinensis
RcHm_v2.0_Chr6g0285211 Rosa chinensis
RcHm_v2.0_Chr7g0218071 Rosa chinensis
Rhsim01G0088000 Rhododendron simsii
Rhsim12G0194700 Rhododendron simsii
RhsimUnG0046000 Rhododendron simsii
Sabra01G0137500 Salix brachista
Sabra03G0034100 Salix brachista
Sabra15G0082500 Salix brachista
SalBow2G1176 Salvia bowleyana
SalBow2G1724 Salvia bowleyana
Sc03g0007760 Simmondsia chinensis
Sc08g0006880 Simmondsia chinensis
Sc18g0000880 Simmondsia chinensis
Sed0019238 Sechium edule
Sed0022362 Sechium edule
SEGI_22791 Sequoiadendron giganteum
SEGI_41453 Sequoiadendron giganteum
SGA_v2.0_scaffold356G49796 Striga asiatica
SGA_v2.0_scaffold37G14796 Striga asiatica
SGA_v2.0_scaffold5G02648 Striga asiatica
SHI22520 Sapria himalayana
SMO171G0079 Selaginella moellendorffii
Solyc03g120010.4 Solanum lycopersicum
Solyc06g052000.1 Solanum lycopersicum
Sopen03g038890 Solanum pennellii
Sp1g13830 Schrenkiella parvula
Sp1g39300 Schrenkiella parvula
Sp3g13900 Schrenkiella parvula
TAR383G0657 Trochodendron aralioides
TAR625G1157 Trochodendron aralioides
TAR626G1528 Trochodendron aralioides
TAR626G1741 Trochodendron aralioides
TAR636G2670 Trochodendron aralioides
THA.LOC104812490 Tarenaya hassleriana
THA.LOC104815540 Tarenaya hassleriana
THA.LOC104818044 Tarenaya hassleriana
Thecc.06G072800 Theobroma cacao
Thecc.06G076400 Theobroma cacao
Thecc.09G119600 Theobroma cacao
Thhalv10008159m.g Eutrema salsugineum
Thhalv10011626m.g Eutrema salsugineum
Thhalv10021071m.g Eutrema salsugineum
TPR.G1719 Trifolium pratense
TWI18G0338 Tripterygium wilfordii
TWI63G0702 Tripterygium wilfordii
unitig_578.g15941 Utricularia gibba
unitig_8.g4505 Utricularia gibba
vmacro16928 Vaccinium macrocarpon
vmacro16929 Vaccinium macrocarpon
vmacro20644 Vaccinium macrocarpon
VMungo1215G1909 Vigna mungo
Zm00001eb276870 Zea mays
Zm00001eb385880 Zea mays

User provided reference genes

Program Settings