Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p27060 Brassica napus
A09p39560 Brassica napus
Aa31LG7G8960 Aethionema arabicum
Actinidia14860 Actinidia chinensis
Actinidia39817 Actinidia chinensis
Ah.13g072880 Amaranthus hybridus
AL1G39760 Arabidopsis lyrata
Aqoxy3G00352 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.48S2GI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.53ZNG0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea
AT1G25540 Arabidopsis thaliana
ATR0681G393 Amborella trichopoda
ATR0782G186 Amborella trichopoda
Atru.chr11.1335 Acer truncatum
Atru.chr11.1338 Acer truncatum
AUR62002298 Chenopodium quinoa
AUR62015392 Chenopodium quinoa
BcaB03g12090 Brassica carinata
BcaC01g01711 Brassica carinata
BcaC05g26443 Brassica carinata
BcaC05g26654 Brassica carinata
BolC3t19582H Brassica oleracea
BolC5t31221H Brassica oleracea
BraA08t34651Z Brassica rapa
BraA09t39454Z Brassica rapa
C03p72840 Brassica napus
C05p24920 Brassica napus
CAN.G2.30 Capsicum annuum
CAN.G2.31 Capsicum annuum
CAN.G674.44 Capsicum annuum
CANSAT64G2157 Cannabis sativa
CARHR025920 Cardamine hirsuta
Carub.0001s2494 Capsella rubella
Ca_19808_v3 Cicer arietinum L.
Cc11_g10490 Coffea canephora
CDE08G0495 Ceratophyllum demersum
Ciclev10030710m.g Citrus clementina
CiPaw.16G003700 Carya illinoinensis
CiPaw.16G003900 Carya illinoinensis
ClCG05G022960 Citrullus lanatus
COL.COLO4_07881 Corchorus olitorius
Cpa.g.sc1.211 Carica papaya
Cpa.g.sc13.36 Carica papaya
CsaV3_5G034050 Cucumis sativus L.
CSS0008826 Camellia sinensis var. sinensis
CSS0014736 Camellia sinensis var. sinensis
CSS0018296 Camellia sinensis var. sinensis
CSS0023076 Camellia sinensis var. sinensis
CSS0024955 Camellia sinensis var. sinensis
DCAR_026720 Daucus carota
Dinv04490 Davidia involucrata
Dinv21122 Davidia involucrata
Dinv40427 Davidia involucrata
Duzib251G0734 Durio zibethinus
ECA234G4415 Erigeron canadensis
ECA246G1507 Erigeron canadensis
ECA246G2084 Erigeron canadensis
EL10Ac3g05929 Beta vulgaris
Eucgr.D01061 Eucalyptus grandis
FAN03G1604 Fragaria x ananassa
FAN04G0139 Fragaria x ananassa
FAN04G1620 Fragaria x ananassa
FAN08G0776 Fragaria x ananassa
FAN10G1902 Fragaria x ananassa
FAN10G2580 Fragaria x ananassa
FAN10G3298 Fragaria x ananassa
FAN12G2547 Fragaria x ananassa
FAN13G1615 Fragaria x ananassa
FAN13G2088 Fragaria x ananassa
FAN13G2443 Fragaria x ananassa
FAN13G2905 Fragaria x ananassa
FAN13G3281 Fragaria x ananassa
FAN18G0496 Fragaria x ananassa
FAN18G2176 Fragaria x ananassa
FAN18G2442 Fragaria x ananassa
FAN18G3612 Fragaria x ananassa
FAN22G1846 Fragaria x ananassa
FAN25G0819 Fragaria x ananassa
FvH4_4g27961 Fragaria vesca
FvH4_5g01900 Fragaria vesca
FvH4_5g05460 Fragaria vesca
FvH4_5g12601 Fragaria vesca
FvH4_5g12610 Fragaria vesca
FvH4_6g01630 Fragaria vesca
Glyma.01G086201 Glycine max
Glyma.01G086600 Glycine max
Glyma.02G098300 Glycine max
Glyma.02G098500 Glycine max
Glyma.20G031800 Glycine max
Gohir.A03G097900 Gossypium hirsutum
Gohir.A13G053428 Gossypium hirsutum
Gohir.D02G115800 Gossypium hirsutum
Gohir.D13G070100 Gossypium hirsutum
Gorai.005G138200 Gossypium raimondii
Gorai.013G080300 Gossypium raimondii
GSVIVG01008248001 Vitis vinifera
GSVIVG01011939001 Vitis vinifera
HanXRQChr16g0529571 Helianthus annuus
HanXRQChr17g0552241 Helianthus annuus
HanXRQChr17g0552251 Helianthus annuus
Haze_17450 Corylus avellana
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla
HPP92_024319 Vanilla planifolia
Hund03157 Selenicereus undatus
Hund25094 Selenicereus undatus
Lalb_Chr00c63g0413851 Lupinus albus
Lalb_Chr08g0231921 Lupinus albus
Lalb_Chr10g0099841 Lupinus albus
Lalb_Chr11g0074771 Lupinus albus
Lalb_Chr14g0371321 Lupinus albus
Lalb_Chr17g0341951 Lupinus albus
Lj2g0014050 Lotus japonicus
Lj2g0016414 Lotus japonicus
Lj2g0022832 Lotus japonicus
Lj2g0024103 Lotus japonicus
Lj2g0026621 Lotus japonicus
Lj6A762T42 Lonicera japonica
Lj6C762G14 Lonicera japonica
Lj6C764G10 Lonicera japonica
Lj6C764G13 Lonicera japonica
Lj9A429G49 Lonicera japonica
Lsat_1_v5_gn_3_60001 Lactuca sativa
Lsat_1_v5_gn_4_19001 Lactuca sativa
Lsat_1_v5_gn_4_19021 Lactuca sativa
Lsat_1_v5_gn_5_57541 Lactuca sativa
Manes.14G098600 Manihot esculenta
Mapoly0022s0114 Marchantia polymorpha
MBI01_g09372_MAGBIO Magnolia biondii
MBI01_g32855_MAGBIO Magnolia biondii
MBI15_g33904_MAGBIO Magnolia biondii
MD16G1046800 Malus domestica
MD16G1047200 Malus domestica
Medtr1g013000 Medicago truncatula
Medtr5g054680 Medicago truncatula
Medtr5g054690 Medicago truncatula
Medtr6g085080 Medicago truncatula
Medtr6g085100 Medicago truncatula
Medtr6g085130 Medicago truncatula
Medtr7g077950 Medicago truncatula
MELO3C012221.2 Cucumis melo
Migut.E00313 Erythranthe guttata
Nitab4.5_0000489g0030 Nicotiana tabacum
Nitab4.5_0000489g0040 Nicotiana tabacum
Nitab4.5_0000597g0030 Nicotiana tabacum
Nitab4.5_0000672g0090 Nicotiana tabacum
Nitab4.5_0000672g0110 Nicotiana tabacum
Nitab4.5_0005194g0020 Nicotiana tabacum
Nn4g23754 Nelumbo nucifera
Oeu010774.1 Olea europaea
Oeu041887.1 Olea europaea
Os09g0306700 Oryza sativa ssp. japonica
Peaxi162Scf00004g01513 Petunia axillaris
Peaxi162Scf00004g01518 Petunia axillaris
Peaxi162Scf00004g01519 Petunia axillaris
PGR142G0084 Punica granatum
PGR142G1725 Punica granatum
PGSC0003DMG401000817 Solanum tuberosum
Phvul.003G028300 Phaseolus vulgaris
Phvul.004G160500 Phaseolus vulgaris
Phvul.004G160600 Phaseolus vulgaris
Potri.008G117700 Populus trichocarpa
Potri.010G128600 Populus trichocarpa
Pp3c25_2430 Physcomitrium patens
Pp3c25_2660 Physcomitrium patens
Prupe.1G306600 Prunus persica
Psat1g039440 Pisum sativum
Psat2g101040 Pisum sativum
Psat3g000280 Pisum sativum
Psat5g020480 Pisum sativum
Psat7g129560 Pisum sativum
PSO017G3087 Papaver somniferum
PSO017G4771 Papaver somniferum
PSO170G6394 Papaver somniferum
PSO339G2630 Papaver somniferum
PSO478G2088 Papaver somniferum
QL01p044747 Quercus lobata
QL10p023587 Quercus lobata
QL10p023599 Quercus lobata
RcHm_v2.0_Chr4g0435671 Rosa chinensis
RcHm_v2.0_Chr5g0075601 Rosa chinensis
RcHm_v2.0_Chr7g0184721 Rosa chinensis
RcHm_v2.0_Chr7g0240991 Rosa chinensis
Rhsim09G0111200 Rhododendron simsii
Sabra02G0035000 Salix brachista
Sabra08G0089300 Salix brachista
Sabra10G0097800 Salix brachista
SalBow8G0674 Salvia bowleyana
Sc04g0003680 Simmondsia chinensis
Sc25g0002400 Simmondsia chinensis
Sed0009737 Sechium edule
SEGI_05160 Sequoiadendron giganteum
SEGI_09967 Sequoiadendron giganteum
SEGI_16352 Sequoiadendron giganteum
SEGI_18915 Sequoiadendron giganteum
SEGI_25943 Sequoiadendron giganteum
SEGI_32224 Sequoiadendron giganteum
SEGI_37982 Sequoiadendron giganteum
SEGI_39328 Sequoiadendron giganteum
SEGI_39906 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33581 Striga asiatica
SGA_v2.0_scaffold14G06838 Striga asiatica
SHI14503 Sapria himalayana
SMO118G0238 Selaginella moellendorffii
SMO340G0161 Selaginella moellendorffii
SMO356G0715 Selaginella moellendorffii
Solyc05g009710.4 Solanum lycopersicum
Solyc12g070100.2 Solanum lycopersicum
Sopen05g005530 Solanum pennellii
Sopen12g027160 Solanum pennellii
Sp1g22670 Schrenkiella parvula
TAR622G0040 Trochodendron aralioides
THA.LOC104808226 Tarenaya hassleriana
THA.LOC104821957 Tarenaya hassleriana
Thecc.02G359700 Theobroma cacao
Thhalv10006778m.g Eutrema salsugineum
TPR.G31455 Trifolium pratense
TPR.G38270 Trifolium pratense
TPR.G38317 Trifolium pratense
TWI31G1103 Tripterygium wilfordii
TWI79G1384 Tripterygium wilfordii
unitig_27.g25246 Utricularia gibba
vmacro10537 Vaccinium macrocarpon
VMungo0251G1889 Vigna mungo
VMungo0464G0094 Vigna mungo
VMungo0464G0516 Vigna mungo
VMungo0464G0817 Vigna mungo
VMungo0464G1061 Vigna mungo
VMungo1215G2122 Vigna mungo
Zm00001eb097890 Zea mays

User provided reference genes

Program Settings