Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03810 Brassica napus
A04p31530 Brassica napus
A05p02240 Brassica napus
A07p23260 Brassica napus
A09p50090 Brassica napus
Aa31LG5G11690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1895 Anthoceros agrestis
Actinidia09279 Actinidia chinensis
Actinidia39176 Actinidia chinensis
Ah.13g077040 Amaranthus hybridus
AL4G39410 Arabidopsis lyrata
AL5G38610 Arabidopsis lyrata
Aqoxy2G00307 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A4KSPL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2XTM9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ4XGR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4FBU4 Arachis hypogaea
AT2G41370 Arabidopsis thaliana
AT3G57130 Arabidopsis thaliana
ATR0721G064 Amborella trichopoda
Atru.chr1.1279 Acer truncatum
AUR62030368 Chenopodium quinoa
AUR62040851 Chenopodium quinoa
BcaB02g07619 Brassica carinata
BcaC02g09902 Brassica carinata
BcaC02g12777 Brassica carinata
BcaC02g12898 Brassica carinata
BcaC07g40032 Brassica carinata
BcaC07g40042 Brassica carinata
BcaC07g40071 Brassica carinata
BcaNung05676 Brassica carinata
BolC4t21907H Brassica oleracea
BolC4t25090H Brassica oleracea
BolC4t28397H Brassica oleracea
BolC6t37578H Brassica oleracea
BolC8t50861H Brassica oleracea
BraA04t16053Z Brassica rapa
BraA04t18610Z Brassica rapa
BraA05t19219Z Brassica rapa
BraA07t29992Z Brassica rapa
BraA09t40458Z Brassica rapa
C04p02650 Brassica napus
C04p35360 Brassica napus
C04p68960 Brassica napus
C06p24250 Brassica napus
C08p32460 Brassica napus
CAN.G1237.34 Capsicum annuum
CAN.G1656.16 Capsicum annuum
CAN.G641.41 Capsicum annuum
CANSAT80G1058 Cannabis sativa
CARHR136490 Cardamine hirsuta
CARHR167310 Cardamine hirsuta
Carub.0004s2368 Capsella rubella
Carub.0005s2394 Capsella rubella
Ca_02477_v3 Cicer arietinum L.
Ca_08396_v3 Cicer arietinum L.
Ca_30853_v3 Cicer arietinum L.
Cc06_g18580 Coffea canephora
CDE08G1468 Ceratophyllum demersum
CDE09G1300 Ceratophyllum demersum
Cfa016730 Carpinus fangiana
Ciclev10004795m.g Citrus clementina
CiPaw.09G044100 Carya illinoinensis
CiPaw.10G037900 Carya illinoinensis
ClCG04G004170 Citrullus lanatus
ClCG10G016010 Citrullus lanatus
COL.COLO4_33928 Corchorus olitorius
COL.COLO4_33929 Corchorus olitorius
Cpa.g.sc5.194 Carica papaya
CsaV3_3G040450 Cucumis sativus L.
CsaV3_4G016020 Cucumis sativus L.
CSS0050405 Camellia sinensis var. sinensis
DCAR_013633 Daucus carota
DCAR_016872 Daucus carota
DCAR_020542 Daucus carota
Dinv04142 Davidia involucrata
Dinv18486 Davidia involucrata
Duzib093G0254 Durio zibethinus
Duzib106G0044 Durio zibethinus
Duzib106G1435 Durio zibethinus
Duzib128G0018 Durio zibethinus
ECA248G2954 Erigeron canadensis
EL10Ac3g07185 Beta vulgaris
Eucgr.A02268 Eucalyptus grandis
Eucgr.K01614 Eucalyptus grandis
FAN02G0783 Fragaria x ananassa
FAN05G5232 Fragaria x ananassa
FAN09G0527 Fragaria x ananassa
FAN14G4644 Fragaria x ananassa
FvH4_6g25090 Fragaria vesca
Glyma.02G188700 Glycine max
Glyma.03G128600 Glycine max
Gohir.A01G193300 Gossypium hirsutum
Gohir.A09G119001 Gossypium hirsutum
Gohir.D01G183600 Gossypium hirsutum
Gohir.D09G115484 Gossypium hirsutum
Gorai.002G226700 Gossypium raimondii
Gorai.006G133600 Gossypium raimondii
GSVIVG01033571001 Vitis vinifera
HanXRQChr05g0141291 Helianthus annuus
HanXRQChr11g0325771 Helianthus annuus
Haze_19738 Corylus avellana
Hma1.2p1_0056F.1_g031840 Hydrangea macrophylla
HPP92_011338 Vanilla planifolia
HPP92_012107 Vanilla planifolia
HPP92_016883 Vanilla planifolia
Hund19114 Selenicereus undatus
Hund24639 Selenicereus undatus
Lalb_Chr02g0156491 Lupinus albus
Lalb_Chr06g0173581 Lupinus albus
Lalb_Chr06g0173591 Lupinus albus
Lalb_Chr14g0365961 Lupinus albus
Lj1A1115T91 Lonicera japonica
Lj1g0004332 Lotus japonicus
Lj2A394T31 Lonicera japonica
Lsat_1_v5_gn_5_159200 Lactuca sativa
Manes.08G056500 Manihot esculenta
Manes.09G008400 Manihot esculenta
MD12G1091100 Malus domestica
MD14G1083700 Malus domestica
Medtr1g051025 Medicago truncatula
Medtr7g090020 Medicago truncatula
MELO3C000534.2 Cucumis melo
MELO3C009778.2 Cucumis melo
MELO3C020730.2 Cucumis melo
Migut.J01683 Erythranthe guttata
MSTRG.10805 Avicennia marina
MSTRG.19823 Avicennia marina
MSTRG.26137 Avicennia marina
MSTRG.6387 Avicennia marina
Nitab4.5_0000571g0010 Nicotiana tabacum
Nitab4.5_0001874g0010 Nicotiana tabacum
Nitab4.5_0002981g0010 Nicotiana tabacum
Nitab4.5_0003134g0010 Nicotiana tabacum
Nitab4.5_0010323g0020 Nicotiana tabacum
Nitab4.5_0011145g0010 Nicotiana tabacum
Nn2g14941 Nelumbo nucifera
Nn7g36503 Nelumbo nucifera
Oeu013029.1 Olea europaea
Oeu013030.1 Olea europaea
Oeu034677.1 Olea europaea
Oeu061821.1 Olea europaea
Oeu062463.1 Olea europaea
Os01g0948900 Oryza sativa ssp. japonica
Os04g0630500 Oryza sativa ssp. japonica
Os04g0690900 Oryza sativa ssp. japonica
Os11g0141900 Oryza sativa ssp. japonica
Os12g0138500 Oryza sativa ssp. japonica
Peaxi162Scf00130g01319 Petunia axillaris
Peaxi162Scf00767g00068 Petunia axillaris
Peaxi162Scf00844g00001 Petunia axillaris
PGR031G2744 Punica granatum
PGR142G2105 Punica granatum
PGSC0003DMG400008160 Solanum tuberosum
PGSC0003DMG400010635 Solanum tuberosum
PGSC0003DMG400029834 Solanum tuberosum
Phvul.001G124100 Phaseolus vulgaris
Phvul.007G248000 Phaseolus vulgaris
Potri.006G043400 Populus trichocarpa
Potri.016G040500 Populus trichocarpa
Pp3c14_11190 Physcomitrium patens
Pp3c17_8330 Physcomitrium patens
Pp3c1_35410 Physcomitrium patens
Prupe.7G046800 Prunus persica
Psat3g077680 Pisum sativum
Psat6g087640 Pisum sativum
Psat6g178600 Pisum sativum
PSO017G4426 Papaver somniferum
PSO170G6437 Papaver somniferum
PSO339G4545 Papaver somniferum
PSO384G2005 Papaver somniferum
QL07p006569 Quercus lobata
RcHm_v2.0_Chr2g0124891 Rosa chinensis
Rhsim03G0034400 Rhododendron simsii
Sabra06G0029600 Salix brachista
Sabra16G0043600 Salix brachista
Sabra16G0047000 Salix brachista
Sc13g0001380 Simmondsia chinensis
Sed0000981 Sechium edule
Sed0013181 Sechium edule
Sed0016323 Sechium edule
Sed0023412 Sechium edule
SEGI_01855 Sequoiadendron giganteum
SEGI_02643 Sequoiadendron giganteum
SEGI_17492 Sequoiadendron giganteum
SEGI_20625 Sequoiadendron giganteum
SEGI_25486 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30330 Striga asiatica
SGA_v2.0_scaffold94G28501 Striga asiatica
SHI24603 Sapria himalayana
SMO169G0174 Selaginella moellendorffii
SMO367G0184 Selaginella moellendorffii
Solyc04g040220.3 Solanum lycopersicum
Solyc05g018160.1 Solanum lycopersicum
Solyc10g079460.1 Solanum lycopersicum
Solyc10g079750.2 Solanum lycopersicum
Sopen04g009920 Solanum pennellii
Sopen05g014850 Solanum pennellii
Sopen10g030100 Solanum pennellii
Sopen10g030380 Solanum pennellii
Sp4g23660 Schrenkiella parvula
Sp5g05440 Schrenkiella parvula
TAR369G0506 Trochodendron aralioides
TAR623G1314 Trochodendron aralioides
TAR623G1420 Trochodendron aralioides
TAR633G1404 Trochodendron aralioides
TAR636G1191 Trochodendron aralioides
THA.LOC104803280 Tarenaya hassleriana
THA.LOC104816455 Tarenaya hassleriana
THA.LOC104824419 Tarenaya hassleriana
Thecc.05G142000 Theobroma cacao
Thhalv10005948m.g Eutrema salsugineum
Thhalv10016568m.g Eutrema salsugineum
TPR.G30633 Trifolium pratense
TPR.G4378 Trifolium pratense
TPR.G4396 Trifolium pratense
TWI53G0686 Tripterygium wilfordii
TWI74G1515 Tripterygium wilfordii
unitig_22.g6061 Utricularia gibba
unitig_37.g12705 Utricularia gibba
unitig_736.g22287 Utricularia gibba
unitig_899.g15086 Utricularia gibba
unitig_899.g15087 Utricularia gibba
unitig_899.g15446 Utricularia gibba
vmacro07826 Vaccinium macrocarpon
VMungo0720G1464 Vigna mungo
VMungo0720G2598 Vigna mungo
VMungo1383G3381 Vigna mungo
Zm00001eb093200 Zea mays
Zm00001eb141160 Zea mays
Zm00001eb363100 Zea mays
Zm00001eb399620 Zea mays
Zm00001eb405060 Zea mays

User provided reference genes

Program Settings