Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08170 Brassica napus
A02p08690 Brassica napus
A03p12950 Brassica napus
A03p59340 Brassica napus
A10p14510 Brassica napus
Aa31LG2G20620 Aethionema arabicum
Aa31LG3G13040 Aethionema arabicum
Actinidia07548 Actinidia chinensis
Actinidia29957 Actinidia chinensis
Actinidia38499 Actinidia chinensis
Ah.09g228370 Amaranthus hybridus
Ah.14g085260 Amaranthus hybridus
AL7G22310 Arabidopsis lyrata
AL8G33080 Arabidopsis lyrata
Aqoxy210s001 Aquilegia oxysepala
Aqoxy7G01431 Aquilegia oxysepala
Aqoxy7G02865 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8ESM9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I63KL3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LSPH1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TV80DA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z25GSD Arachis hypogaea
AT4G29930 Arabidopsis thaliana
AT5G57150 Arabidopsis thaliana
ATR0580G279 Amborella trichopoda
Atru.chr7.953 Acer truncatum
AUR62027481 Chenopodium quinoa
AUR62033996 Chenopodium quinoa
BcaB01g04447 Brassica carinata
BcaB03g12626 Brassica carinata
BcaB05g22325 Brassica carinata
BcaB08g35990 Brassica carinata
BcaC01g01204 Brassica carinata
BcaC01g06471 Brassica carinata
BcaC03g14177 Brassica carinata
BcaC04g19996 Brassica carinata
BcaC04g19999 Brassica carinata
BcaC04g20001 Brassica carinata
BcaC09g51776 Brassica carinata
BcaNung00504 Brassica carinata
BcaNung05129 Brassica carinata
BolC1t00906H Brassica oleracea
BolC2t07576H Brassica oleracea
BolC3t13954H Brassica oleracea
BolC7t46206H Brassica oleracea
BolC9t57748H Brassica oleracea
BraA01t00765Z Brassica rapa
BraA02t05939Z Brassica rapa
BraA03t10603Z Brassica rapa
BraA03t14991Z Brassica rapa
BraA10t43540Z Brassica rapa
C01p09150 Brassica napus
C02p14520 Brassica napus
C03p15120 Brassica napus
C03p89000 Brassica napus
C07p57370 Brassica napus
C09p48960 Brassica napus
CAN.G33.15 Capsicum annuum
CAN.G630.34 Capsicum annuum
CAN.G630.47 Capsicum annuum
CAN.G630.49 Capsicum annuum
CANSAT11G2675 Cannabis sativa
CARHR237850 Cardamine hirsuta
CARHR270930 Cardamine hirsuta
Carub.0007s1071 Capsella rubella
Carub.0008s1766 Capsella rubella
Ca_02113_v3 Cicer arietinum L.
Cc00_g07200 Coffea canephora
Cc00_g16650 Coffea canephora
Cc00_g27610 Coffea canephora
Cc06_g17490 Coffea canephora
Cfa013458 Carpinus fangiana
Ciclev10009285m.g Citrus clementina
CiPaw.07G197800 Carya illinoinensis
CiPaw.08G032100 Carya illinoinensis
ClCG06G013660 Citrullus lanatus
ClCG11G011690 Citrullus lanatus
COL.COLO4_20756 Corchorus olitorius
COL.COLO4_20757 Corchorus olitorius
Cpa.g.sc115.71 Carica papaya
CsaV3_1G031920 Cucumis sativus L.
CsaV3_2G008770 Cucumis sativus L.
CSS0013595 Camellia sinensis var. sinensis
CSS0019249 Camellia sinensis var. sinensis
DCAR_014671 Daucus carota
DCAR_014672 Daucus carota
DCAR_014673 Daucus carota
DCAR_014674 Daucus carota
DCAR_018019 Daucus carota
DCAR_018020 Daucus carota
DCAR_018023 Daucus carota
DCAR_018026 Daucus carota
DCAR_018028 Daucus carota
Dinv25454 Davidia involucrata
Dinv41185 Davidia involucrata
Duzib150G0502 Durio zibethinus
Duzib170G0500 Durio zibethinus
ECA234G0639 Erigeron canadensis
ECA236G2226 Erigeron canadensis
EL10Ac8g19238 Beta vulgaris
Eucgr.C00105 Eucalyptus grandis
Eucgr.C02208 Eucalyptus grandis
FAN07G2768 Fragaria x ananassa
FAN12G0901 Fragaria x ananassa
FAN17G1134 Fragaria x ananassa
FAN22G1121 Fragaria x ananassa
FvH4_4g07090 Fragaria vesca
Glyma.09G060200 Glycine max
Glyma.13G101100 Glycine max
Glyma.15G166800 Glycine max
Glyma.17G058600 Glycine max
Gohir.A05G002000 Gossypium hirsutum
Gohir.A13G208100 Gossypium hirsutum
Gohir.D05G002300 Gossypium hirsutum
Gohir.D13G212500 Gossypium hirsutum
Gorai.009G002200 Gossypium raimondii
Gorai.013G242800 Gossypium raimondii
GSVIVG01029311001 Vitis vinifera
HanXRQChr05g0141021 Helianthus annuus
HanXRQChr12g0358491 Helianthus annuus
HanXRQChr14g0438651 Helianthus annuus
Haze_22032 Corylus avellana
Hma1.2p1_0022F.1_g014480 Hydrangea macrophylla
Hma1.2p1_0235F.1_g098700 Hydrangea macrophylla
Hma1.2p1_0478F.1_g161340 Hydrangea macrophylla
Hma1.2p1_0478F.1_g161350 Hydrangea macrophylla
HPP92_010291 Vanilla planifolia
Hund06684 Selenicereus undatus
Lalb_Chr11g0074721 Lupinus albus
Lalb_Chr13g0299931 Lupinus albus
Lalb_Chr23g0276781 Lupinus albus
Lj5A342T73 Lonicera japonica
Lj6g0004328 Lotus japonicus
Lsat_1_v5_gn_1_51580 Lactuca sativa
Lsat_1_v5_gn_1_71621 Lactuca sativa
Lsat_1_v5_gn_3_13560 Lactuca sativa
Lsat_1_v5_gn_3_98701 Lactuca sativa
Lsat_1_v5_gn_5_83461 Lactuca sativa
Lsat_1_v5_gn_8_69161 Lactuca sativa
Manes.06G018700 Manihot esculenta
Manes.14G159203 Manihot esculenta
MBI13_g10716_MAGBIO Magnolia biondii
MBI16_g30547_MAGBIO Magnolia biondii
MD13G1239700 Malus domestica
MD16G1247600 Malus domestica
Medtr2g038040 Medicago truncatula
MELO3C003968.2 Cucumis melo
MELO3C017424.2 Cucumis melo
Migut.G00610 Erythranthe guttata
Migut.J00792 Erythranthe guttata
Migut.L01878 Erythranthe guttata
MSTRG.10437 Avicennia marina
MSTRG.19368 Avicennia marina
MSTRG.26550 Avicennia marina
MSTRG.26551 Avicennia marina
Nitab4.5_0001245g0010 Nicotiana tabacum
Nitab4.5_0004784g0010 Nicotiana tabacum
Nn8g40718 Nelumbo nucifera
Oeu003874.1 Olea europaea
Oeu006841.1 Olea europaea
Oeu019560.1 Olea europaea
Oeu044668.1 Olea europaea
Oeu064558.1 Olea europaea
Os04g0300600 Oryza sativa ssp. japonica
Os04g0301500 Oryza sativa ssp. japonica
Peaxi162Scf00231g01015 Petunia axillaris
PGR044G2354 Punica granatum
PGSC0003DMG400004087 Solanum tuberosum
PGSC0003DMG400017440 Solanum tuberosum
Phvul.003G140800 Phaseolus vulgaris
Phvul.009G235700 Phaseolus vulgaris
Potri.006G074600 Populus trichocarpa
Potri.006G074700 Populus trichocarpa
Potri.006G074800 Populus trichocarpa
Potri.006G074900 Populus trichocarpa
Potri.018G141500 Populus trichocarpa
Potri.018G141600 Populus trichocarpa
Potri.018G141700 Populus trichocarpa
Potri.018G141800 Populus trichocarpa
Prupe.1G074400 Prunus persica
Psat0s1424g0040 Pisum sativum
Psat1g143680 Pisum sativum
Psat1g144360 Pisum sativum
PSO017G0500 Papaver somniferum
PSO063G1015 Papaver somniferum
PSO063G2859 Papaver somniferum
PSO063G6283 Papaver somniferum
PSO170G2239 Papaver somniferum
PSO210G0409 Papaver somniferum
PSO339G5718 Papaver somniferum
PSO421G0010 Papaver somniferum
QL02p046473 Quercus lobata
QL04p081578 Quercus lobata
RcHm_v2.0_Chr4g0399211 Rosa chinensis
Rhsim03G0267300 Rhododendron simsii
Sabra06G0055600 Salix brachista
Sabra18G0115400 Salix brachista
Sabra18G0115500 Salix brachista
Sabra18G0115600 Salix brachista
Sabra18G0115700 Salix brachista
Sabra18G0115800 Salix brachista
SalBow6G7147 Salvia bowleyana
Sc08g0006970 Simmondsia chinensis
Sc18g0000930 Simmondsia chinensis
Sed0006766 Sechium edule
Sed0009797 Sechium edule
Sed0013903 Sechium edule
Sed0016934 Sechium edule
Sed0027332 Sechium edule
SGA_v2.0_scaffold31G12771 Striga asiatica
Solyc05g014590.3 Solanum lycopersicum
Solyc07g018010.3 Solanum lycopersicum
Sopen05g009670 Solanum pennellii
Sopen07g006930 Solanum pennellii
Sp7g27740 Schrenkiella parvula
TAR376G0985 Trochodendron aralioides
TAR626G0250 Trochodendron aralioides
TAR636G0157 Trochodendron aralioides
THA.LOC104811768 Tarenaya hassleriana
THA.LOC104813504 Tarenaya hassleriana
THA.LOC104814649 Tarenaya hassleriana
THA.LOC104820010 Tarenaya hassleriana
Thecc.09G187100 Theobroma cacao
Thhalv10014506m.g Eutrema salsugineum
Thhalv10027332m.g Eutrema salsugineum
TPR.G7574 Trifolium pratense
TWI32G1249 Tripterygium wilfordii
TWI63G1846 Tripterygium wilfordii
unitig_22.g5160 Utricularia gibba
unitig_22.g5161 Utricularia gibba
unitig_578.g15742 Utricularia gibba
vmacro05993 Vaccinium macrocarpon
VMungo1215G1772 Vigna mungo
VMungo1309G0576 Vigna mungo
Zm00001eb086370 Zea mays
Zm00001eb415520 Zea mays
Zm00001eb420440 Zea mays

User provided reference genes

Program Settings