Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26030 Brassica napus
A03p32020 Brassica napus
A09p27380 Brassica napus
Aa31LG2G580 Aethionema arabicum
Aa31LG5G260 Aethionema arabicum
Actinidia02037 Actinidia chinensis
Actinidia14527 Actinidia chinensis
Ah.12g057580 Amaranthus hybridus
AL6G46330 Arabidopsis lyrata
AL6G52710 Arabidopsis lyrata
AL7G30460 Arabidopsis lyrata
Aqoxy6G01981 Aquilegia oxysepala
Aqoxy7G00426 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00WUVK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2WQF85 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82UWGV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EU6ASS Arachis hypogaea
AT4G00752 Arabidopsis thaliana
AT4G11740 Arabidopsis thaliana
AT4G23040 Arabidopsis thaliana
ATR0757G204 Amborella trichopoda
Atru.chr5.413 Acer truncatum
Atru.chr9.1547 Acer truncatum
Atru.chr9.1548 Acer truncatum
AUR62010645 Chenopodium quinoa
AUR62017287 Chenopodium quinoa
BcaB01g01676 Brassica carinata
BcaB01g04178 Brassica carinata
BcaB05g23812 Brassica carinata
BcaC01g06859 Brassica carinata
BcaC03g16334 Brassica carinata
BcaNung04043 Brassica carinata
BcaNung06111 Brassica carinata
BolC2t10170H Brassica oleracea
BolC3t16176H Brassica oleracea
BolC9t56316H Brassica oleracea
BraA02t07602Z Brassica rapa
BraA03t12374Z Brassica rapa
BraA09t38307Z Brassica rapa
C02p41530 Brassica napus
C03p39040 Brassica napus
C09p34700 Brassica napus
CAN.G981.24 Capsicum annuum
CANSAT21G2344 Cannabis sativa
CANSAT56G1884 Cannabis sativa
CARHR230100 Cardamine hirsuta
CARHR248930 Cardamine hirsuta
CARHR254610 Cardamine hirsuta
Carub.0002s0187 Capsella rubella
Carub.0006s3083 Capsella rubella
Carub.0006s3646 Capsella rubella
Carub.0007s1823 Capsella rubella
Ca_20250_v3 Cicer arietinum L.
Ca_23746_v3 Cicer arietinum L.
CBR_g50340 Chara braunii
Cc08_g14060 Coffea canephora
CDE04G0886 Ceratophyllum demersum
CDE04G2022 Ceratophyllum demersum
CDE09G0350 Ceratophyllum demersum
CDE11G0083 Ceratophyllum demersum
CDE12G0835 Ceratophyllum demersum
Cfa012110 Carpinus fangiana
Ciclev10019482m.g Citrus clementina
Ciclev10019779m.g Citrus clementina
CiPaw.01G054900 Carya illinoinensis
CiPaw.11G140600 Carya illinoinensis
CiPaw.12G097600 Carya illinoinensis
ClCG00G000910 Citrullus lanatus
ClCG00G001160 Citrullus lanatus
ClCG00G006330 Citrullus lanatus
ClCG05G001840 Citrullus lanatus
ClCG10G003770 Citrullus lanatus
ClCG10G003780 Citrullus lanatus
ClCG10G003790 Citrullus lanatus
COL.COLO4_05264 Corchorus olitorius
COL.COLO4_12615 Corchorus olitorius
Cpa.g.sc18.220 Carica papaya
Cpa.g.sc74.81 Carica papaya
Cre04.g230830 Chlamydomonas reinhardtii
CsaV3_3G003750 Cucumis sativus L.
CsaV3_3G009230 Cucumis sativus L.
CSS0002116 Camellia sinensis var. sinensis
CSS0004594 Camellia sinensis var. sinensis
DCAR_004672 Daucus carota
DCAR_006758 Daucus carota
DCAR_017785 Daucus carota
Dinv37683 Davidia involucrata
Dinv37684 Davidia involucrata
Dinv39004 Davidia involucrata
Duzib068G1440 Durio zibethinus
Duzib138G0581 Durio zibethinus
Duzib205G1004 Durio zibethinus
ECA240G2117 Erigeron canadensis
EL10Ac5g12735 Beta vulgaris
Eucgr.D02246 Eucalyptus grandis
Eucgr.E00535 Eucalyptus grandis
FAN01G2025 Fragaria x ananassa
FAN03G1671 Fragaria x ananassa
FAN04G2772 Fragaria x ananassa
FAN06G1792 Fragaria x ananassa
FAN06G1900 Fragaria x ananassa
FAN08G2255 Fragaria x ananassa
FAN08G3344 Fragaria x ananassa
FAN13G0317 Fragaria x ananassa
FAN18G2326 Fragaria x ananassa
FvH4_5g01560 Fragaria vesca
FvH4_7g13300 Fragaria vesca
Glyma.05G049200 Glycine max
Glyma.07G077200 Glycine max
Glyma.17G131100 Glycine max
Gohir.A07G143900 Gossypium hirsutum
Gohir.A09G193001 Gossypium hirsutum
Gohir.A12G225400 Gossypium hirsutum
Gohir.D07G149800 Gossypium hirsutum
Gohir.D09G187200 Gossypium hirsutum
Gohir.D12G228000 Gossypium hirsutum
Gorai.001G171400 Gossypium raimondii
Gorai.006G210000 Gossypium raimondii
Gorai.008G244000 Gossypium raimondii
GSVIVG01019815001 Vitis vinifera
GSVIVG01019816001 Vitis vinifera
HanXRQChr13g0416781 Helianthus annuus
HanXRQChr13g0417491 Helianthus annuus
HanXRQChr13g0417541 Helianthus annuus
HanXRQChr17g0533751 Helianthus annuus
Haze_08941 Corylus avellana
Haze_15214 Corylus avellana
Hma1.2p1_0371F.1_g138100 Hydrangea macrophylla
Hma1.2p1_0514F.1_g170040 Hydrangea macrophylla
HPP92_022610 Vanilla planifolia
HPP92_022611 Vanilla planifolia
Hund11524 Selenicereus undatus
Hund11525 Selenicereus undatus
Lalb_Chr05g0225031 Lupinus albus
Lalb_Chr09g0321151 Lupinus albus
Lalb_Chr10g0097461 Lupinus albus
Lalb_Chr16g0377211 Lupinus albus
Lalb_Chr16g0389741 Lupinus albus
Lj2A193T55 Lonicera japonica
Lj2g0016961 Lotus japonicus
Lj3g0008628 Lotus japonicus
Lj8A238T60 Lonicera japonica
Lsat_1_v5_gn_3_5420 Lactuca sativa
Lsat_1_v5_gn_5_13461 Lactuca sativa
Lsat_1_v5_gn_6_49340 Lactuca sativa
Lsat_1_v5_gn_6_87540 Lactuca sativa
Manes.01G066200 Manihot esculenta
Manes.01G261500 Manihot esculenta
Mapoly0001s0364 Marchantia polymorpha
MBI04_g00304_MAGBIO Magnolia biondii
MBI12_g29747_MAGBIO Magnolia biondii
MD01G1050500 Malus domestica
MD04G1066700 Malus domestica
MD06G1073600 Malus domestica
Medtr4g102810 Medicago truncatula
Medtr8g432670 Medicago truncatula
MELO3C006143.2 Cucumis melo
MELO3C014057.2 Cucumis melo
Migut.A00926 Erythranthe guttata
Migut.E01291 Erythranthe guttata
MSTRG.12015 Avicennia marina
Nitab4.5_0002234g0060 Nicotiana tabacum
Nitab4.5_0002853g0040 Nicotiana tabacum
Nn1g01376 Nelumbo nucifera
Nn6g34230 Nelumbo nucifera
Oeu011663.1 Olea europaea
Oeu031597.1 Olea europaea
Oeu048784.1 Olea europaea
Oeu059065.2 Olea europaea
Os08g0546400 Oryza sativa ssp. japonica
Os09g0525600 Oryza sativa ssp. japonica
Peaxi162Scf00714g00057 Petunia axillaris
PGR031G1229 Punica granatum
PGR042G2076 Punica granatum
PGSC0003DMG400003048 Solanum tuberosum
Phvul.003G212000 Phaseolus vulgaris
Phvul.010G090600 Phaseolus vulgaris
Phvul.010G090700 Phaseolus vulgaris
Potri.001G109500 Populus trichocarpa
Potri.003G122300 Populus trichocarpa
Potri.014G075600 Populus trichocarpa
Prupe.2G156600 Prunus persica
Prupe.5G091800 Prunus persica
Psat4g066960 Pisum sativum
Psat4g152000 Pisum sativum
PSO478G0346 Papaver somniferum
PSO782G3187 Papaver somniferum
QL08p050362 Quercus lobata
QL08p050399 Quercus lobata
QL12p017410 Quercus lobata
RcHm_v2.0_Chr1g0329331 Rosa chinensis
RcHm_v2.0_Chr1g0352561 Rosa chinensis
RcHm_v2.0_Chr3g0481331 Rosa chinensis
RcHm_v2.0_Chr4g0427171 Rosa chinensis
RcHm_v2.0_Chr7g0199121 Rosa chinensis
Rhsim07G0094100 Rhododendron simsii
Rhsim11G0003500 Rhododendron simsii
Rhsim11G0003600 Rhododendron simsii
Sabra01G0082800 Salix brachista
Sabra03G0086200 Salix brachista
Sabra14G0056200 Salix brachista
SalBow6G0746 Salvia bowleyana
Sc01g0008750 Simmondsia chinensis
Sc22g0000260 Simmondsia chinensis
Sed0001920 Sechium edule
Sed0012052 Sechium edule
Sed0021874 Sechium edule
SEGI_16894 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35971 Striga asiatica
SGA_v2.0_scaffold385G50454 Striga asiatica
SGA_v2.0_scaffold8G04622 Striga asiatica
SHI09624 Sapria himalayana
SMO271G0047 Selaginella moellendorffii
Solyc08g080410.3 Solanum lycopersicum
Sopen08g028740 Solanum pennellii
Sp6g00740 Schrenkiella parvula
Sp6g05690 Schrenkiella parvula
TAR375G0217 Trochodendron aralioides
TAR629G1766 Trochodendron aralioides
TAR629G3349 Trochodendron aralioides
TAR636G2592 Trochodendron aralioides
THA.LOC104806375 Tarenaya hassleriana
THA.LOC104814310 Tarenaya hassleriana
THA.LOC109115975 Tarenaya hassleriana
Thecc.01G367100 Theobroma cacao
Thecc.03G272100 Theobroma cacao
Thhalv10028549m.g Eutrema salsugineum
Thhalv10028647m.g Eutrema salsugineum
TPR.G17587 Trifolium pratense
TPR.G19228 Trifolium pratense
TWI14G0634 Tripterygium wilfordii
TWI60G1702 Tripterygium wilfordii
TWI81G0934 Tripterygium wilfordii
unitig_26.g9695 Utricularia gibba
vmacro00201 Vaccinium macrocarpon
VMungo0331G0411 Vigna mungo
VMungo1215G1054 Vigna mungo
Zm00001eb103170 Zea mays
Zm00001eb198600 Zea mays
Zm00001eb319030 Zea mays

User provided reference genes

Program Settings