Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02660 Brassica napus
A06p33500 Brassica napus
A09p11620 Brassica napus
Aa31LG6G13030 Aethionema arabicum
Aa31LG8G15100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.861 Anthoceros agrestis
Actinidia00879 Actinidia chinensis
Actinidia00882 Actinidia chinensis
Actinidia11221 Actinidia chinensis
Actinidia15056 Actinidia chinensis
Actinidia17445 Actinidia chinensis
Actinidia17489 Actinidia chinensis
Actinidia17490 Actinidia chinensis
Actinidia17492 Actinidia chinensis
Actinidia17493 Actinidia chinensis
Actinidia17494 Actinidia chinensis
Actinidia17496 Actinidia chinensis
Actinidia17497 Actinidia chinensis
Actinidia17498 Actinidia chinensis
Actinidia17499 Actinidia chinensis
Actinidia22977 Actinidia chinensis
Actinidia22978 Actinidia chinensis
Actinidia22979 Actinidia chinensis
Actinidia22980 Actinidia chinensis
Actinidia22981 Actinidia chinensis
Actinidia25289 Actinidia chinensis
Actinidia30998 Actinidia chinensis
Ah.03g148750 Amaranthus hybridus
AL3G50950 Arabidopsis lyrata
AL5G13110 Arabidopsis lyrata
AL7G14960 Arabidopsis lyrata
Aqoxy5G01784 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E76U4D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FN5NT6 Arachis hypogaea
AT2G17930 Arabidopsis thaliana
AT4G36080 Arabidopsis thaliana
ATR0259G001 Amborella trichopoda
ATR0560G004 Amborella trichopoda
ATR0630G002 Amborella trichopoda
ATR0630G005 Amborella trichopoda
ATR0633G003 Amborella trichopoda
ATR0803G001 Amborella trichopoda
ATR1041G001 Amborella trichopoda
Atru.chr1.3786 Acer truncatum
Atru.chr1.4014 Acer truncatum
Atru.chr1.4015 Acer truncatum
Atru.chr1.4016 Acer truncatum
Atru.chr1.4017 Acer truncatum
Atru.chr1.4018 Acer truncatum
Atru.chr1.4019 Acer truncatum
Atru.chr1.4030 Acer truncatum
AUR62003370 Chenopodium quinoa
AUR62029462 Chenopodium quinoa
BcaB07g31700 Brassica carinata
BcaB08g34776 Brassica carinata
BcaC01g02877 Brassica carinata
BcaC04g22939 Brassica carinata
BcaNung00767 Brassica carinata
BolC1t00282H Brassica oleracea
BolC3t18143H Brassica oleracea
BolC9t54256H Brassica oleracea
BraA01t00252Z Brassica rapa
BraA06t26284Z Brassica rapa
BraA09t36808Z Brassica rapa
C01p02960 Brassica napus
C03p58840 Brassica napus
C09p13660 Brassica napus
CAN.G1671.12 Capsicum annuum
CAN.G1671.13 Capsicum annuum
CANSAT01G1381 Cannabis sativa
CARHR108410 Cardamine hirsuta
CARHR244480 Cardamine hirsuta
Carub.0003s3206 Capsella rubella
Carub.0007s0415 Capsella rubella
Ca_25825_v3 Cicer arietinum L.
CBR_g31691 Chara braunii
Cc07_g10710 Coffea canephora
Cfa006971 Carpinus fangiana
Cfa023980 Carpinus fangiana
Ciclev10024677m.g Citrus clementina
CiPaw.07G058400 Carya illinoinensis
ClCG01G020300 Citrullus lanatus
COL.COLO4_11117 Corchorus olitorius
COL.COLO4_11384 Corchorus olitorius
COL.COLO4_17676 Corchorus olitorius
COL.COLO4_18103 Corchorus olitorius
COL.COLO4_21196 Corchorus olitorius
COL.COLO4_21736 Corchorus olitorius
COL.COLO4_21911 Corchorus olitorius
COL.COLO4_21944 Corchorus olitorius
COL.COLO4_37332 Corchorus olitorius
Cpa.g.sc6.247 Carica papaya
Cpa.g.sc6.248 Carica papaya
Cpa.g.sc6.249 Carica papaya
Cpa.g.sc6.250 Carica papaya
Cre02.g088750 Chlamydomonas reinhardtii
CsaV3_6G047090 Cucumis sativus L.
CSS0038464 Camellia sinensis var. sinensis
CSS0040827 Camellia sinensis var. sinensis
DCAR_025997 Daucus carota
Dinv40086 Davidia involucrata
Duzib147G0886 Durio zibethinus
Duzib187G1438 Durio zibethinus
ECA238G3174 Erigeron canadensis
EL10Ac6g15479 Beta vulgaris
EL10Ac6g15480 Beta vulgaris
Eucgr.I02351 Eucalyptus grandis
FAN19G0100 Fragaria x ananassa
FAN23G1788 Fragaria x ananassa
FAN26G2624 Fragaria x ananassa
FAN28G1007 Fragaria x ananassa
FvH4_1g11860 Fragaria vesca
Glyma.01G166400 Glycine max
Glyma.11G077000 Glycine max
Gohir.A02G170550 Gossypium hirsutum
Gohir.A02G170600 Gossypium hirsutum
Gohir.A11G175500 Gossypium hirsutum
Gohir.A11G175528 Gossypium hirsutum
Gohir.A11G175556 Gossypium hirsutum
Gohir.A11G175584 Gossypium hirsutum
Gohir.A11G175612 Gossypium hirsutum
Gohir.D03G009500 Gossypium hirsutum
Gohir.D11G183100 Gossypium hirsutum
Gohir.D11G183201 Gossypium hirsutum
Gorai.003G009700 Gossypium raimondii
Gorai.007G195100 Gossypium raimondii
GSVIVG01018783001 Vitis vinifera
HanXRQChr13g0414661 Helianthus annuus
HanXRQChr14g0441401 Helianthus annuus
Haze_03764 Corylus avellana
Haze_03765 Corylus avellana
Hma1.2p1_0258F.1_g104160 Hydrangea macrophylla
Hma1.2p1_0956F.1_g241330 Hydrangea macrophylla
HPP92_000368 Vanilla planifolia
HPP92_000371 Vanilla planifolia
HPP92_000372 Vanilla planifolia
HPP92_000393 Vanilla planifolia
HPP92_000448 Vanilla planifolia
HPP92_000449 Vanilla planifolia
HPP92_000450 Vanilla planifolia
HPP92_000451 Vanilla planifolia
Hund16489 Selenicereus undatus
Lalb_Chr09g0321741 Lupinus albus
Lalb_Chr09g0321751 Lupinus albus
Lalb_Chr16g0377511 Lupinus albus
Lj2C468G7 Lonicera japonica
Lj2g0011330 Lotus japonicus
Lj6g0023005 Lotus japonicus
Lsat_1_v5_gn_2_75940 Lactuca sativa
Lsat_1_v5_gn_4_55920 Lactuca sativa
Lsat_1_v5_gn_9_110060 Lactuca sativa
Manes.01G145600 Manihot esculenta
Mapoly0010s0094 Marchantia polymorpha
MBI09_g12804_MAGBIO Magnolia biondii
MBI14_g08214_MAGBIO Magnolia biondii
MBI14_g08216_MAGBIO Magnolia biondii
MBI14_g08218_MAGBIO Magnolia biondii
MCO16G028 Micromonas commoda
MD02G1132600 Malus domestica
MD15G1245900 Malus domestica
Medtr5g022000 Medicago truncatula
Medtr5g038110 Medicago truncatula
MELO3C000137.2 Cucumis melo
MELO3C007903.2 Cucumis melo
MELO3C027087.2 Cucumis melo
Migut.H01155 Erythranthe guttata
MSTRG.2713 Avicennia marina
Nitab4.5_0003382g0060 Nicotiana tabacum
Nitab4.5_0003382g0080 Nicotiana tabacum
Nitab4.5_0005660g0020 Nicotiana tabacum
Nitab4.5_0005660g0030 Nicotiana tabacum
Nitab4.5_0026560g0010 Nicotiana tabacum
Nn5g30154 Nelumbo nucifera
Oeu005318.1 Olea europaea
Os07g0645100 Oryza sativa ssp. japonica
Os07g0645200 Oryza sativa ssp. japonica
Peaxi162Scf00083g00425 Petunia axillaris
PGR119G1290 Punica granatum
PGSC0003DMG400003562 Solanum tuberosum
PGSC0003DMG402003570 Solanum tuberosum
Phvul.002G108900 Phaseolus vulgaris
Potri.005G114300 Populus trichocarpa
Potri.007G057850 Populus trichocarpa
Potri.007G057900 Populus trichocarpa
Pp3c14_17070 Physcomitrium patens
Pp3c17_20000 Physcomitrium patens
PRCOL_00005144 Prasinoderma coloniale
Prupe.7G168000 Prunus persica
Psat2g154720 Pisum sativum
Psat3g170360 Pisum sativum
Psat4g065600 Pisum sativum
Psat4g093120 Pisum sativum
Psat6g157240 Pisum sativum
PSO541G3550 Papaver somniferum
PSO675G2090 Papaver somniferum
QL06p032715 Quercus lobata
QL06p032741 Quercus lobata
RcHm_v2.0_Chr2g0099461 Rosa chinensis
Rhsim10G0212300 Rhododendron simsii
Rhsim10G0212400 Rhododendron simsii
Rhsim10G0212500 Rhododendron simsii
Sabra05G0093500 Salix brachista
Sabra07G0049600 Salix brachista
SalBow3G1624 Salvia bowleyana
Sc07g0000970 Simmondsia chinensis
Sed0017656 Sechium edule
Sed0027366 Sechium edule
SEGI_03562 Sequoiadendron giganteum
SEGI_15795 Sequoiadendron giganteum
SGA_v2.0_scaffold78G25389 Striga asiatica
SHI08551 Sapria himalayana
SHI08552 Sapria himalayana
SHI08553 Sapria himalayana
SHI08554 Sapria himalayana
SMO147G0347 Selaginella moellendorffii
Solyc02g083765.1 Solanum lycopersicum
Solyc02g083780.3 Solanum lycopersicum
Solyc02g083900.3 Solanum lycopersicum
Sopen02g028550 Solanum pennellii
Sopen02g028690 Solanum pennellii
Sp3g31350 Schrenkiella parvula
Sp7g33860 Schrenkiella parvula
TAR381G0408 Trochodendron aralioides
TAR625G0893 Trochodendron aralioides
THA.LOC104804262 Tarenaya hassleriana
THA.LOC104819750 Tarenaya hassleriana
Thecc.01G019100 Theobroma cacao
Thhalv10022516m.g Eutrema salsugineum
Thhalv10024177m.g Eutrema salsugineum
TPR.G18175 Trifolium pratense
TPR.G18181 Trifolium pratense
TWI09G0522 Tripterygium wilfordii
unitig_0.g2 Utricularia gibba
unitig_0.g3 Utricularia gibba
unitig_0.g4 Utricularia gibba
vmacro21921 Vaccinium macrocarpon
vmacro21922 Vaccinium macrocarpon
vmacro23248 Vaccinium macrocarpon
vmacro23471 Vaccinium macrocarpon
vmacro23472 Vaccinium macrocarpon
Zm00001eb329250 Zea mays

User provided reference genes

Program Settings