Gene: Solyc02g083900.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g083900.3
  • Transcript Identifier Solyc02g083900.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 45144169-45166119 : negative

Gene Family Information

  • ID HOM05D002880
  • #Genes/#Species 241/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g083900.3.1
  • uniprot A0A3Q7F8Y5
  • gene_id Solyc02g083900

Descriptions

  • Description Transformation/transcription domain associated protein (AHRD V3.3 *** A0A2K3NKS8_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated
GO:0006281
IBA
GOA DatabaseDNA repair
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006468
IEA
GOA Databaseprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0005515
IEA
InterProprotein binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0106310
IEA
GOA Databaseprotein serine kinase activity
GO:0106311
IEA
GOA Databaseprotein threonine kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016301
IEA
InterProkinase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G36080
GO:0070461
ISO
PLAZA Integrative OrthologySAGA-type complex AT4G36080
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G17930
GO:0005634
IBA
GOA Databasenucleus
GO:0000124
IBA
GOA DatabaseSAGA complex
GO:0035267
IBA
GOA DatabaseNuA4 histone acetyltransferase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain
IPR003151 PIK-related kinase, FAT
IPR003152 FATC domain
IPR036940 Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
12.3.1.1.2.2 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.assembly platform.assembly platform component TRA1
15.3.4.3.3.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.assembly platform component TRA1