Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10050 Brassica napus
A03p14430 Brassica napus
A10p12010 Brassica napus
Aa31LG3G10690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1980 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2040 Anthoceros agrestis
Actinidia05115 Actinidia chinensis
Actinidia05116 Actinidia chinensis
Actinidia09924 Actinidia chinensis
Actinidia10712 Actinidia chinensis
Actinidia35322 Actinidia chinensis
Ah.04g165540 Amaranthus hybridus
AL8G30200 Arabidopsis lyrata
Aqoxy4G01983 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.76C20C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4HCA7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q36MFY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2E5NI Arachis hypogaea
AT5G54770 Arabidopsis thaliana
ATR0686G081 Amborella trichopoda
Atru.chr2.3227 Acer truncatum
AUR62015664 Chenopodium quinoa
AUR62020539 Chenopodium quinoa
BcaB01g04323 Brassica carinata
BcaB05g22156 Brassica carinata
BcaB08g35839 Brassica carinata
BcaB08g35841 Brassica carinata
BcaB08g35842 Brassica carinata
BcaC01g06325 Brassica carinata
BcaC03g14292 Brassica carinata
BcaC04g20304 Brassica carinata
BolC2t07776H Brassica oleracea
BolC3t14100H Brassica oleracea
BolC9t57392H Brassica oleracea
BraA02t06074Z Brassica rapa
BraA03t10739Z Brassica rapa
BraA10t43303Z Brassica rapa
C02p16700 Brassica napus
C03p16800 Brassica napus
C09p45180 Brassica napus
CAN.G337.94 Capsicum annuum
CANSAT21G2459 Cannabis sativa
CARHR268120 Cardamine hirsuta
Carub.0008s1504 Capsella rubella
Ca_10899_v3 Cicer arietinum L.
Ca_10900_v3 Cicer arietinum L.
Ca_10968_v3 Cicer arietinum L.
Ca_10976_v3 Cicer arietinum L.
Ca_10978_v3 Cicer arietinum L.
Ca_10979_v3 Cicer arietinum L.
Ca_10987_v3 Cicer arietinum L.
Ca_10993_v3 Cicer arietinum L.
Ca_10998_v3 Cicer arietinum L.
Ca_10999_v3 Cicer arietinum L.
Ca_11015_v3 Cicer arietinum L.
Ca_17960_v3 Cicer arietinum L.
Ca_18853_v3 Cicer arietinum L.
Ca_18854_v3 Cicer arietinum L.
CBR_g30805 Chara braunii
Cc02_g11650 Coffea canephora
Cc05_g13310 Coffea canephora
CDE01G0115 Ceratophyllum demersum
CDE12G0491 Ceratophyllum demersum
Cfa000268 Carpinus fangiana
Cfa021009 Carpinus fangiana
Cfa021161 Carpinus fangiana
Cfa024499 Carpinus fangiana
Ciclev10008765m.g Citrus clementina
Ciclev10015727m.g Citrus clementina
Ciclev10024231m.g Citrus clementina
CiPaw.09G087800 Carya illinoinensis
CiPaw.11G184900 Carya illinoinensis
CiPaw.12G127000 Carya illinoinensis
ClCG10G005650 Citrullus lanatus
COL.COLO4_09587 Corchorus olitorius
COL.COLO4_24255 Corchorus olitorius
Cpa.g.sc97.56 Carica papaya
Cre04.g214150 Chlamydomonas reinhardtii
CsaV3_3G005340 Cucumis sativus L.
CSS0041266 Camellia sinensis var. sinensis
CSS0043117 Camellia sinensis var. sinensis
DCAR_004198 Daucus carota
DCAR_028161 Daucus carota
Dinv17827 Davidia involucrata
Dinv22297 Davidia involucrata
Dinv22298 Davidia involucrata
Dinv40721 Davidia involucrata
Duzib170G1111 Durio zibethinus
Duzib192G0435 Durio zibethinus
Duzib235G0126 Durio zibethinus
ECA236G2898 Erigeron canadensis
ECA246G0799 Erigeron canadensis
EL10Ac2g02496 Beta vulgaris
EL10Ac2g02498 Beta vulgaris
EL10Ac3g05399 Beta vulgaris
EL10Ac9g21055 Beta vulgaris
Eucgr.E04118 Eucalyptus grandis
Eucgr.F03433 Eucalyptus grandis
FAN11G0492 Fragaria x ananassa
FAN11G3916 Fragaria x ananassa
FAN16G0593 Fragaria x ananassa
FAN16G3331 Fragaria x ananassa
FAN21G0148 Fragaria x ananassa
FAN25G3444 Fragaria x ananassa
FvH4_3g21940 Fragaria vesca
FvH4_3g33490 Fragaria vesca
Glyma.06G269700 Glycine max
Glyma.10G251500 Glycine max
Glyma.12G135000 Glycine max
Glyma.20G142000 Glycine max
Gohir.A01G075700 Gossypium hirsutum
Gohir.A05G168100 Gossypium hirsutum
Gohir.A06G145200 Gossypium hirsutum
Gohir.D01G063000 Gossypium hirsutum
Gohir.D05G171200 Gossypium hirsutum
Gohir.D06G151000 Gossypium hirsutum
Gorai.002G083700 Gossypium raimondii
Gorai.009G176400 Gossypium raimondii
Gorai.010G176000 Gossypium raimondii
GSVIVG01001977001 Vitis vinifera
GSVIVG01012636001 Vitis vinifera
HanXRQChr11g0337721 Helianthus annuus
HanXRQChr15g0494701 Helianthus annuus
Haze_06746 Corylus avellana
Haze_09625 Corylus avellana
Haze_09628 Corylus avellana
Hma1.2p1_1564F.1_g290870 Hydrangea macrophylla
Hma1.2p1_1564F.1_g290880 Hydrangea macrophylla
Hma1.2p1_1564F.1_g290890 Hydrangea macrophylla
Hma1.2p1_1869F.1_g306073 Hydrangea macrophylla
Hma1.2p1_1869F.1_g306076 Hydrangea macrophylla
Hma1.2p1_1869F.1_g306079 Hydrangea macrophylla
HPP92_012325 Vanilla planifolia
HPP92_012391 Vanilla planifolia
Lalb_Chr03g0030121 Lupinus albus
Lalb_Chr03g0030131 Lupinus albus
Lalb_Chr05g0210861 Lupinus albus
Lalb_Chr09g0319641 Lupinus albus
Lj1A1226T39 Lonicera japonica
Lj1A866T44 Lonicera japonica
Lj3g0002422 Lotus japonicus
Lj5g0019245 Lotus japonicus
Lj8A166T87 Lonicera japonica
Lj8C166T3 Lonicera japonica
Lsat_1_v5_gn_5_5940 Lactuca sativa
Lsat_1_v5_gn_7_107941 Lactuca sativa
Manes.03G123800 Manihot esculenta
Manes.15G075600 Manihot esculenta
Mapoly0078s0009 Marchantia polymorpha
MBI02_g10106_MAGBIO Magnolia biondii
MBI18_g38456_MAGBIO Magnolia biondii
MBI18_g41278_MAGBIO Magnolia biondii
MD03G1210100 Malus domestica
MD11G1224800 Malus domestica
Medtr1g105480 Medicago truncatula
Medtr4g081130 Medicago truncatula
MELO3C025408.2 Cucumis melo
Migut.H01554 Erythranthe guttata
Migut.M01288 Erythranthe guttata
Migut.M01803 Erythranthe guttata
MSTRG.13157 Avicennia marina
MSTRG.15968 Avicennia marina
MSTRG.7236 Avicennia marina
Nitab4.5_0000397g0010 Nicotiana tabacum
Nitab4.5_0008278g0010 Nicotiana tabacum
Nn1g07046 Nelumbo nucifera
Oeu032443.1 Olea europaea
Oeu051220.1 Olea europaea
Os07g0529600 Oryza sativa ssp. japonica
Peaxi162Scf00247g00721 Petunia axillaris
Peaxi162Scf01086g00142 Petunia axillaris
PGR031G3433 Punica granatum
PGR042G1198 Punica granatum
PGSC0003DMG400019257 Solanum tuberosum
Phvul.007G052900 Phaseolus vulgaris
Phvul.011G139100 Phaseolus vulgaris
Potri.004G020500 Populus trichocarpa
Potri.011G025200 Populus trichocarpa
Potri.011G134900 Populus trichocarpa
Pp3c20_13540 Physcomitrium patens
Pp3c20_13543 Physcomitrium patens
Pp3c20_13770 Physcomitrium patens
Pp3c22_8930 Physcomitrium patens
Pp3c23_6510 Physcomitrium patens
Pp3c23_6580 Physcomitrium patens
Pp3c23_6600 Physcomitrium patens
Pp3c24_10800 Physcomitrium patens
Pp3c8_11240 Physcomitrium patens
Prupe.4G205100 Prunus persica
Psat6g209120 Pisum sativum
Psat7g162720 Pisum sativum
PSO017G0234 Papaver somniferum
PSO541G2753 Papaver somniferum
PSO541G4197 Papaver somniferum
PSO675G4797 Papaver somniferum
PSO675G7845 Papaver somniferum
PSO675G8477 Papaver somniferum
QL05p074900 Quercus lobata
QL08p012770 Quercus lobata
QL08p012887 Quercus lobata
QL93p0073_0447 Quercus lobata
RcHm_v2.0_Chr5g0037761 Rosa chinensis
RcHm_v2.0_Chr5g0060861 Rosa chinensis
RcHm_v2.0_Chr5g0060911 Rosa chinensis
Rhsim12G0083500 Rhododendron simsii
RhsimUnG0252900 Rhododendron simsii
Sabra04G0011300 Salix brachista
Sabra11G0015800 Salix brachista
Sabra11G0021500 Salix brachista
Sabra11G0120900 Salix brachista
SalBow8G1876 Salvia bowleyana
Sc03g0008890 Simmondsia chinensis
Sed0003643 Sechium edule
Sed0014758 Sechium edule
SEGI_06177 Sequoiadendron giganteum
SEGI_13504 Sequoiadendron giganteum
SEGI_15987 Sequoiadendron giganteum
SEGI_20324 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18267 Striga asiatica
SHI31854 Sapria himalayana
SMO147G0097 Selaginella moellendorffii
Solyc07g064160.3 Solanum lycopersicum
Sopen07g032300 Solanum pennellii
Sp6g16710 Schrenkiella parvula
TAR626G0612 Trochodendron aralioides
TAR629G2657 Trochodendron aralioides
THA.LOC104817652 Tarenaya hassleriana
Thecc.06G214800 Theobroma cacao
Thecc.07G050600 Theobroma cacao
Thhalv10013978m.g Eutrema salsugineum
TPR.G17446 Trifolium pratense
TPR.G28625 Trifolium pratense
TPR.G47 Trifolium pratense
TWI38G1247 Tripterygium wilfordii
TWI38G2275 Tripterygium wilfordii
unitig_52.g17550 Utricularia gibba
unitig_578.g16005 Utricularia gibba
vmacro01250 Vaccinium macrocarpon
vmacro09745 Vaccinium macrocarpon
VMungo0720G0047 Vigna mungo
VMungo1127G1570 Vigna mungo
Zm00001eb356910 Zea mays

User provided reference genes

Program Settings