Gene: Pp3c20_13540
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c20_13540
- Transcript Identifier Pp3c20_13540V3.1
- Gene Type Coding gene
- Location Chr20 : 8828859-8830079 : positive
Gene Family Information
- ID HOM05D002858
- #Genes/#Species 242/97
- Phylogenetic origin
- ID ORTHO05D003161
- #Genes/#Species 240/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c20_13540V3.1
- pacid 32947203
- uniprot A0A2K1IV51
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G54770 |
| GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT5G54770 |
| GO:0018131 | ISO | PLAZA Integrative Orthology | oxazole or thiazole biosynthetic process | AT5G54770 |
| GO:0052837 | IEA | GOA Database | thiazole biosynthetic process | |
| GO:0009228 | IEA | GOA Database | thiamine biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G54770 |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT5G54770 |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT5G54770 |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005506 | IEA | GOA Database | iron ion binding | |
| GO:0016763 | IEA | GOA Database | pentosyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT5G54770 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G54770 |
| GO:0010319 | ISO | PLAZA Integrative Orthology | stromule | AT5G54770 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G54770 |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0009570 | IEA | GOA Database | chloroplast stroma |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 7.2.2.1 | Coenzyme metabolism.thiamine pyrophosphate biosynthesis.thiazole biosynthesis.biosynthetic protein (Thi4) |