Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48930 Brassica napus
A08p24120 Brassica napus
Aa31LG6G16540 Aethionema arabicum
Actinidia02851 Actinidia chinensis
Actinidia17431 Actinidia chinensis
Actinidia22964 Actinidia chinensis
Actinidia22965 Actinidia chinensis
Actinidia35663 Actinidia chinensis
Ah.03g148970 Amaranthus hybridus
AL7G10520 Arabidopsis lyrata
Aqoxy6G02253 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.354MLN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65IRPJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79Z7IJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.88HTN6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9LPGA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J663RV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WSZK9U Arachis hypogaea
AT4G38630 Arabidopsis thaliana
ATR0579G146 Amborella trichopoda
Atru.chr3.826 Acer truncatum
Atru.chr3.836 Acer truncatum
Atru.chr5.3294 Acer truncatum
AUR62003353 Chenopodium quinoa
AUR62029483 Chenopodium quinoa
BcaB03g12214 Brassica carinata
BcaB03g12215 Brassica carinata
BcaB06g27444 Brassica carinata
BcaC01g00244 Brassica carinata
BcaC09g50689 Brassica carinata
BcaNung01970 Brassica carinata
BolC1t02146H Brassica oleracea
BolC2t10733H Brassica oleracea
BolC2t10734H Brassica oleracea
BolC3t19974H Brassica oleracea
BolC7t46775H Brassica oleracea
BraA03t15392Z Brassica rapa
BraA06t27761Z Brassica rapa
BraA08t34367Z Brassica rapa
C01p22150 Brassica napus
C02p46880 Brassica napus
C03p77190 Brassica napus
C07p63620 Brassica napus
CAN.G1274.20 Capsicum annuum
CAN.G1817.6 Capsicum annuum
CANSAT25G3087 Cannabis sativa
CARHR294350 Cardamine hirsuta
Carub.0007s0050 Capsella rubella
Ca_22389_v3 Cicer arietinum L.
Ca_24914_v3 Cicer arietinum L.
CBR_g36857 Chara braunii
Cc07_g10940 Coffea canephora
CDE05G0346 Ceratophyllum demersum
CDE05G0567 Ceratophyllum demersum
Cfa024414 Carpinus fangiana
Ciclev10025759m.g Citrus clementina
Ciclev10028565m.g Citrus clementina
CiPaw.07G060200 Carya illinoinensis
CiPaw.08G129400 Carya illinoinensis
ClCG01G020390 Citrullus lanatus
ClCG10G000640 Citrullus lanatus
COL.COLO4_22448 Corchorus olitorius
Cpa.g.sc37.159 Carica papaya
Cpa.g.sc6.273 Carica papaya
Cre16.g663500 Chlamydomonas reinhardtii
CsaV3_3G000720 Cucumis sativus L.
CsaV3_6G047270 Cucumis sativus L.
CSS0036680 Camellia sinensis var. sinensis
CSS0043975 Camellia sinensis var. sinensis
DCAR_016595 Daucus carota
Dinv33646 Davidia involucrata
Dinv40107 Davidia involucrata
Duzib132G0460 Durio zibethinus
Duzib147G0782 Durio zibethinus
Duzib264G1085 Durio zibethinus
ECA232G2246 Erigeron canadensis
ECA232G2254 Erigeron canadensis
ECA233G1838 Erigeron canadensis
ECA234G3373 Erigeron canadensis
ECA236G5095 Erigeron canadensis
EL10Ac6g15490 Beta vulgaris
Eucgr.J02453 Eucalyptus grandis
FAN15G2029 Fragaria x ananassa
FAN15G3395 Fragaria x ananassa
FAN19G1375 Fragaria x ananassa
FAN20G2645 Fragaria x ananassa
FAN23G1652 Fragaria x ananassa
FAN24G1120 Fragaria x ananassa
FAN24G1153 Fragaria x ananassa
FAN26G3359 Fragaria x ananassa
FAN27G0959 Fragaria x ananassa
FAN27G1649 Fragaria x ananassa
FAN28G0701 Fragaria x ananassa
FvH4_1g11620 Fragaria vesca
FvH4_2g01440 Fragaria vesca
FvH4_2g26060 Fragaria vesca
Glyma.01G165100 Glycine max
Glyma.02G046900 Glycine max
Glyma.11G078100 Glycine max
Glyma.16G126300 Glycine max
Gohir.A02G171600 Gossypium hirsutum
Gohir.A03G204500 Gossypium hirsutum
Gohir.A04G131200 Gossypium hirsutum
Gohir.A07G184600 Gossypium hirsutum
Gohir.A13G077200 Gossypium hirsutum
Gohir.D01G087801 Gossypium hirsutum
Gohir.D02G158525 Gossypium hirsutum
Gohir.D02G225800 Gossypium hirsutum
Gohir.D03G008500 Gossypium hirsutum
Gohir.D03G065983 Gossypium hirsutum
Gohir.D04G167600 Gossypium hirsutum
Gohir.D10G154650 Gossypium hirsutum
Gorai.002G057600 Gossypium raimondii
Gorai.003G008700 Gossypium raimondii
Gorai.005G178000 Gossypium raimondii
Gorai.005G253700 Gossypium raimondii
Gorai.011G172600 Gossypium raimondii
Gorai.012G082300 Gossypium raimondii
Gorai.012G155900 Gossypium raimondii
GSVIVG01018756001 Vitis vinifera
GSVIVG01035284001 Vitis vinifera
HanXRQChr08g0218841 Helianthus annuus
HanXRQChr12g0368741 Helianthus annuus
Haze_02159 Corylus avellana
Haze_03742 Corylus avellana
Haze_27521 Corylus avellana
Hma1.2p1_0315F.1_g122260 Hydrangea macrophylla
Hma1.2p1_1306F.1_g274700 Hydrangea macrophylla
Hma1.2p1_1306F.1_g274710 Hydrangea macrophylla
HPP92_002425 Vanilla planifolia
Hund14054 Selenicereus undatus
Hund16498 Selenicereus undatus
Lalb_Chr05g0212331 Lupinus albus
Lalb_Chr09g0321661 Lupinus albus
Lalb_Chr16g0377461 Lupinus albus
Lj2A474G40 Lonicera japonica
Lj2A479T46 Lonicera japonica
Lj2C474G13 Lonicera japonica
Lj2g0009265 Lotus japonicus
Lj4C221T7 Lonicera japonica
Lj4g0014490 Lotus japonicus
Lsat_1_v5_gn_7_4361 Lactuca sativa
Lsat_1_v5_gn_8_40821 Lactuca sativa
Manes.02G137100 Manihot esculenta
Manes.02G137500 Manihot esculenta
Manes.11G095200 Manihot esculenta
Mapoly0084s0054 Marchantia polymorpha
MBI05_g23513_MAGBIO Magnolia biondii
MBI05_g28274_MAGBIO Magnolia biondii
MBI05_g28275_MAGBIO Magnolia biondii
MBI05_g33513_MAGBIO Magnolia biondii
MBI07_g38937_MAGBIO Magnolia biondii
MBI09_g26549_MAGBIO Magnolia biondii
MBI17_g01811_MAGBIO Magnolia biondii
MBI17_g16838_MAGBIO Magnolia biondii
MBI17_g38951_MAGBIO Magnolia biondii
MBI19_g01950_MAGBIO Magnolia biondii
MCO01G757 Micromonas commoda
MD02G1129100 Malus domestica
MD05G1119600 Malus domestica
MD10G1123300 Malus domestica
MD15G1243700 Malus domestica
Medtr5g022440 Medicago truncatula
Medtr8g075390 Medicago truncatula
MELO3C007918.2 Cucumis melo
MELO3C013760.2 Cucumis melo
Migut.H02162 Erythranthe guttata
Migut.L00692 Erythranthe guttata
MSTRG.23402 Avicennia marina
MSTRG.2723 Avicennia marina
Nitab4.5_0000438g0180 Nicotiana tabacum
Nitab4.5_0000864g0210 Nicotiana tabacum
Nitab4.5_0001658g0070 Nicotiana tabacum
Nitab4.5_0004340g0020 Nicotiana tabacum
Nn5g30738 Nelumbo nucifera
Nn6g32023 Nelumbo nucifera
Oeu007451.1 Olea europaea
Oeu054763.3 Olea europaea
Os03g0243300 Oryza sativa ssp. japonica
Os10g0141400 Oryza sativa ssp. japonica
Peaxi162Scf00328g00720 Petunia axillaris
Peaxi162Scf00635g00717 Petunia axillaris
PGR102G2817 Punica granatum
PGSC0003DMG400003575 Solanum tuberosum
PGSC0003DMG400022558 Solanum tuberosum
Phvul.002G107500 Phaseolus vulgaris
Phvul.003G264300 Phaseolus vulgaris
Potri.004G173700 Populus trichocarpa
Potri.007G056200 Populus trichocarpa
Potri.009G133000 Populus trichocarpa
Pp3c6_20680 Physcomitrium patens
PRCOL_00005855 Prasinoderma coloniale
Prupe.7G170300 Prunus persica
Prupe.8G163800 Prunus persica
Psat2g153600 Pisum sativum
Psat4g100920 Pisum sativum
PSO170G5494 Papaver somniferum
PSO478G0969 Papaver somniferum
PSO478G4653 Papaver somniferum
PSO541G0073 Papaver somniferum
PSO675G6526 Papaver somniferum
PSO700G0086 Papaver somniferum
QL06p050893 Quercus lobata
QL11p049945 Quercus lobata
RcHm_v2.0_Chr1g0337511 Rosa chinensis
RcHm_v2.0_Chr2g0099211 Rosa chinensis
RcHm_v2.0_Chr2g0159871 Rosa chinensis
RcHm_v2.0_Chr6g0244071 Rosa chinensis
RcHm_v2.0_Chr6g0252421 Rosa chinensis
RcHm_v2.0_Chr6g0273251 Rosa chinensis
RcHm_v2.0_Chr6g0294421 Rosa chinensis
Rhsim08G0032500 Rhododendron simsii
RhsimUnG0240700 Rhododendron simsii
SalBow3G4338 Salvia bowleyana
Sc16g0002330 Simmondsia chinensis
Sed0019164 Sechium edule
Sed0019730 Sechium edule
SGA_v2.0_scaffold37G14609 Striga asiatica
SMO116G0016 Selaginella moellendorffii
Solyc02g083710.3 Solanum lycopersicum
Solyc03g033430.1 Solanum lycopersicum
Sopen02g028480 Solanum pennellii
Sp7g37150 Schrenkiella parvula
TAR376G0528 Trochodendron aralioides
TAR381G0674 Trochodendron aralioides
TAR625G1542 Trochodendron aralioides
TAR628G1384 Trochodendron aralioides
THA.LOC104807816 Tarenaya hassleriana
THA.LOC104820145 Tarenaya hassleriana
THA.LOC104821334 Tarenaya hassleriana
Thecc.01G016100 Theobroma cacao
Thecc.02G062400 Theobroma cacao
Thhalv10025445m.g Eutrema salsugineum
TPR.G10541 Trifolium pratense
TPR.G19495 Trifolium pratense
TWI09G0756 Tripterygium wilfordii
TWI73G1208 Tripterygium wilfordii
unitig_699.g19706 Utricularia gibba
vmacro18406 Vaccinium macrocarpon
VMungo0251G2732 Vigna mungo
VMungo1215G0551 Vigna mungo
Zm00001eb010400 Zea mays
Zm00001eb026350 Zea mays
Zm00001eb383700 Zea mays
Zm00001eb398860 Zea mays

User provided reference genes

Program Settings