Gene: Pp3c6_20680

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c6_20680
  • Transcript Identifier Pp3c6_20680V3.2
  • Gene Type Coding gene
  • Location Chr06 : 13090044-13093718 : negative

Gene Family Information

  • ID HOM05D002828
  • #Genes/#Species 245/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c6_20680V3.2
  • pacid 32975697
  • alias Phpat.006G076300
  • alias Phypa_159668
  • alias Pp1s14_318V6
  • uniprot Q9LM05

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009651
IEA
GOA Databaseresponse to salt stress
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT4G38630
GO:0080129
ISO
PLAZA Integrative Orthologyproteasome core complex assembly AT4G38630
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G38630
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT4G38630
GO:0048455
ISO
PLAZA Integrative Orthologystamen formation AT4G38630
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0010150
IEA
GOA Databaseleaf senescence
GO:0010029
IEA
GOA Databaseregulation of seed germination
GO:0009744
IEA
GOA Databaseresponse to sucrose
GO:0009737
IEA
GOA Databaseresponse to abscisic acid
GO:0009735
IEA
GOA Databaseresponse to cytokinin
GO:0009733
IEA
GOA Databaseresponse to auxin
GO:0009408
IEA
GOA Databaseresponse to heat
GO:0051788
IEA
GOA Databaseresponse to misfolded protein
GO:0048767
IEA
GOA Databaseroot hair elongation
GO:0048528
IEA
GOA Databasepost-embryonic root development
GO:0048366
IEA
GOA Databaseleaf development
GO:0043248
IBA
IEA
GOA Databaseproteasome assembly
GO:0043161
IBA
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G38630
GO:0031593
IBA
IEA
GOA Databasepolyubiquitin modification-dependent protein binding
GO:0001653
IEA
GOA Databasepeptide receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
IEA
GOA Databasecytosol
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0005634
IBA
GOA Databasenucleus
GO:0008540
IBA
GOA Databaseproteasome regulatory particle, base subcomplex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002035 von Willebrand factor, type A
IPR036465 von Willebrand factor A-like domain superfamily
IPR003903 Ubiquitin interacting motif
Mapman id Description
19.2.5.2.2.9 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN10