Gene: Pp3c6_20680
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c6_20680
- Transcript Identifier Pp3c6_20680V3.2
- Gene Type Coding gene
- Location Chr06 : 13090044-13093718 : negative
Gene Family Information
- ID HOM05D002828
- #Genes/#Species 245/96
- Phylogenetic origin
- ID ORTHO05D003457
- #Genes/#Species 222/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c6_20680V3.2
- pacid 32975697
- alias Phpat.006G076300
- alias Phypa_159668
- alias Pp1s14_318V6
- uniprot Q9LM05
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009651 | IEA | GOA Database | response to salt stress | |
GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT4G38630 |
GO:0080129 | ISO | PLAZA Integrative Orthology | proteasome core complex assembly | AT4G38630 |
GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G38630 |
GO:0030163 | ISO | PLAZA Integrative Orthology | protein catabolic process | AT4G38630 |
GO:0048455 | ISO | PLAZA Integrative Orthology | stamen formation | AT4G38630 |
GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
GO:0010150 | IEA | GOA Database | leaf senescence | |
GO:0010029 | IEA | GOA Database | regulation of seed germination | |
GO:0009744 | IEA | GOA Database | response to sucrose | |
GO:0009737 | IEA | GOA Database | response to abscisic acid | |
GO:0009735 | IEA | GOA Database | response to cytokinin | |
GO:0009733 | IEA | GOA Database | response to auxin | |
GO:0009408 | IEA | GOA Database | response to heat | |
GO:0051788 | IEA | GOA Database | response to misfolded protein | |
GO:0048767 | IEA | GOA Database | root hair elongation | |
GO:0048528 | IEA | GOA Database | post-embryonic root development | |
GO:0048366 | IEA | GOA Database | leaf development | |
GO:0043248 | IBA IEA | GOA Database | proteasome assembly | |
GO:0043161 | IBA IEA | GOA Database | proteasome-mediated ubiquitin-dependent protein catabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G38630 |
GO:0031593 | IBA IEA | GOA Database | polyubiquitin modification-dependent protein binding | |
GO:0001653 | IEA | GOA Database | peptide receptor activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | IBA IEA | GOA Database | cytosol | |
GO:0000502 | IEA | GOA Database | proteasome complex | |
GO:0005634 | IBA | GOA Database | nucleus | |
GO:0008540 | IBA | GOA Database | proteasome regulatory particle, base subcomplex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.5.2.2.9 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN10 |