Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28030 Brassica napus
Aa31LG9G11000 Aethionema arabicum
AL2G20560 Arabidopsis lyrata
AL2G21720 Arabidopsis lyrata
AL6G45360 Arabidopsis lyrata
Aqoxy7G01548 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RFE8PP Arachis hypogaea
AT4G11175 Arabidopsis thaliana
ATCG00770 Arabidopsis thaliana
Atru.chr1.2540 Acer truncatum
Atru.chr9.2077 Acer truncatum
BcaB01g01596 Brassica carinata
BcaB05g23855 Brassica carinata
BcaC04g21113 Brassica carinata
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus
BolC7t41708H Brassica oleracea
BolC9t56393H Brassica oleracea
BolC9t57548H Brassica oleracea
BolSC29t60529H Brassica oleracea
BolSC29t60610H Brassica oleracea
BolSC35t60670H Brassica oleracea
BolSC35t60729H Brassica oleracea
BolSC49t61163H Brassica oleracea
BolSC56t61248H Brassica oleracea
BraA06t25384Z Brassica rapa
BraA09t38371Z Brassica rapa
BraSC103t45445Z Brassica rapa
BraSC103t45484Z Brassica rapa
BraSC138t45553Z Brassica rapa
BraSC143t45637Z Brassica rapa
BraSC58t46441Z Brassica rapa
BraSC58t46502Z Brassica rapa
BraSC59t46570Z Brassica rapa
C02p60170 Brassica napus
C09p35540 Brassica napus
C09p46990 Brassica napus
CAN.G1595.2 Capsicum annuum
CAN.G327.20 Capsicum annuum
CAN.G767.42 Capsicum annuum
CARHR255400 Cardamine hirsuta
CARHR282250 Cardamine hirsuta
Carub.0006s3001 Capsella rubella
Ca_24278_v3 Cicer arietinum L.
Ca_29478_v3 Cicer arietinum L.
Cc09_g05310 Coffea canephora
Ciclev10022760m.g Citrus clementina
CiPaw.11G169000 Carya illinoinensis
ClCG00G003150 Citrullus lanatus
ClCG00G003160 Citrullus lanatus
ClCG10G008280 Citrullus lanatus
ClCG11G017170 Citrullus lanatus
ClCG11G018100 Citrullus lanatus
COL.COLO4_01958 Corchorus olitorius
COL.COLO4_02277 Corchorus olitorius
COL.COLO4_21755 Corchorus olitorius
Cpa.g.sc0.196 Carica papaya
Cpa.g.sc321.5 Carica papaya
Cre04.g218700 Chlamydomonas reinhardtii
CsaV3_4G033730 Cucumis sativus L.
CSS0027777 Camellia sinensis var. sinensis
DCAR_032520 Daucus carota
DCAR_032521 Daucus carota
Duzib084G0020 Durio zibethinus
Duzib205G1549 Durio zibethinus
EL10Ac5g11668 Beta vulgaris
EL10Ac5g11781 Beta vulgaris
EL10As15g24111 Beta vulgaris
Eucgr.E03558 Eucalyptus grandis
Eucgr.G00343 Eucalyptus grandis
FAN10G1907 Fragaria x ananassa
FAN11G2965 Fragaria x ananassa
FAN16G1250 Fragaria x ananassa
FAN21G0827 Fragaria x ananassa
FAN22G0293 Fragaria x ananassa
FAN25G0310 Fragaria x ananassa
FvH4_3g20270 Fragaria vesca
Glyma.05G019600 Glycine max
Glyma.17G080200 Glycine max
Gohir.1Z050134 Gossypium hirsutum
Gohir.A05G396400 Gossypium hirsutum
Gohir.A06G056900 Gossypium hirsutum
Gohir.A08G063166 Gossypium hirsutum
Gohir.A12G024800 Gossypium hirsutum
Gohir.A12G228400 Gossypium hirsutum
Gohir.A12G232300 Gossypium hirsutum
Gohir.D01G102138 Gossypium hirsutum
Gohir.D03G105400 Gossypium hirsutum
Gohir.D08G062280 Gossypium hirsutum
Gohir.D08G194656 Gossypium hirsutum
Gohir.D11G307000 Gossypium hirsutum
Gohir.D12G235100 Gossypium hirsutum
Gohir.D13G121750 Gossypium hirsutum
Gorai.003G111500 Gossypium raimondii
Gorai.005G065900 Gossypium raimondii
Gorai.008G251300 Gossypium raimondii
Gorai.013G136400 Gossypium raimondii
GSVIVG01014320001 Vitis vinifera
HanXRQChr00c0394g0574541 Helianthus annuus
HanXRQChr00c0394g0574551 Helianthus annuus
HanXRQChr00c0593g0576361 Helianthus annuus
HanXRQChr00c0593g0576371 Helianthus annuus
HanXRQChr00c0925g0577891 Helianthus annuus
HanXRQChr00c0925g0577901 Helianthus annuus
HanXRQChr01g0020211 Helianthus annuus
HanXRQChr01g0020221 Helianthus annuus
HanXRQChr02g0052601 Helianthus annuus
HanXRQChr04g0127481 Helianthus annuus
HanXRQChr04g0127491 Helianthus annuus
HanXRQChr05g0152571 Helianthus annuus
HanXRQChr10g0284381 Helianthus annuus
HanXRQChr10g0284391 Helianthus annuus
HanXRQChr10g0318051 Helianthus annuus
HanXRQChr10g0318061 Helianthus annuus
HanXRQChr11g0321091 Helianthus annuus
HanXRQChr11g0321101 Helianthus annuus
HanXRQChr11g0326961 Helianthus annuus
HanXRQChr11g0326971 Helianthus annuus
HanXRQChr11g0345281 Helianthus annuus
HanXRQChr12g0369851 Helianthus annuus
HanXRQChr12g0369861 Helianthus annuus
HanXRQChr15g0486561 Helianthus annuus
HanXRQChr17g0554561 Helianthus annuus
HanXRQCPg0580181 Helianthus annuus
HanXRQCPg0580191 Helianthus annuus
Hma1.2p1_0818F.1_g223320 Hydrangea macrophylla
Hund04057 Selenicereus undatus
Hund08020 Selenicereus undatus
Hund08802 Selenicereus undatus
Hund12527 Selenicereus undatus
Hund15214 Selenicereus undatus
Hund19320 Selenicereus undatus
Hund27578 Selenicereus undatus
Hund27962 Selenicereus undatus
Hund27985 Selenicereus undatus
Hund28109 Selenicereus undatus
Hund28268 Selenicereus undatus
Hund28459 Selenicereus undatus
Hund28519 Selenicereus undatus
Hund28529 Selenicereus undatus
Hund28632 Selenicereus undatus
Hund28678 Selenicereus undatus
Hund28746 Selenicereus undatus
Hund28759 Selenicereus undatus
Hund28778 Selenicereus undatus
Hund28846 Selenicereus undatus
Hund29022 Selenicereus undatus
Hund29036 Selenicereus undatus
Hund29164 Selenicereus undatus
Hund29217 Selenicereus undatus
Hund29505 Selenicereus undatus
Hund29525 Selenicereus undatus
Hund29537 Selenicereus undatus
Hund29554 Selenicereus undatus
Hund29593 Selenicereus undatus
Hund29605 Selenicereus undatus
Hund29612 Selenicereus undatus
Hund29682 Selenicereus undatus
Hund29957 Selenicereus undatus
Hund30031 Selenicereus undatus
Hund30069 Selenicereus undatus
Hund30272 Selenicereus undatus
Hund30490 Selenicereus undatus
Hund30495 Selenicereus undatus
Hund30544 Selenicereus undatus
Hund31501 Selenicereus undatus
Lalb_Chr01g0006541 Lupinus albus
Lalb_Chr03g0039321 Lupinus albus
Lalb_Chr20g0114531 Lupinus albus
Lalb_Chr23g0274241 Lupinus albus
Lalb_Chr25g0283371 Lupinus albus
Lj3g0012155 Lotus japonicus
LjContig00318g0002732 Lotus japonicus
Lsat_1_v5_gn_1_116300 Lactuca sativa
Lsat_1_v5_gn_2_136980 Lactuca sativa
Manes.07G025200 Manihot esculenta
Manes.10G116800 Manihot esculenta
MBI05_g05353_MAGBIO Magnolia biondii
MBI15_g40528_MAGBIO Magnolia biondii
MD11G1244000 Malus domestica
Medtr0002s0770 Medicago truncatula
Medtr4g034810 Medicago truncatula
Medtr4g059910 Medicago truncatula
Medtr8g061130 Medicago truncatula
MELO3C016702.2 Cucumis melo
MELO3C026355.2 Cucumis melo
MELO3C027648.2 Cucumis melo
MELO3C027652.2 Cucumis melo
MELO3C027952.2 Cucumis melo
MELO3C030417.2 Cucumis melo
MELO3C032365.2 Cucumis melo
MELO3C033566.2 Cucumis melo
MELO3C033570.2 Cucumis melo
Migut.D01328 Erythranthe guttata
Nitab4.5_0000173g0110 Nicotiana tabacum
Nitab4.5_0000676g0190 Nicotiana tabacum
Nitab4.5_0002229g0270 Nicotiana tabacum
Nitab4.5_0005206g0060 Nicotiana tabacum
Nitab4.5_0011882g0040 Nicotiana tabacum
Nitab4.5_0020737g0030 Nicotiana tabacum
Nn002s41361 Nelumbo nucifera
Nn021s41522 Nelumbo nucifera
Nn021s41523 Nelumbo nucifera
Nn070s42371 Nelumbo nucifera
Oeu054718.1 Olea europaea
Peaxi162Scf00299g00114 Petunia axillaris
Peaxi162Scf00652g00418 Petunia axillaris
PGR042G2139 Punica granatum
PGR111G0083 Punica granatum
PGSC0003DMG400007705 Solanum tuberosum
Phvul.001G158000 Phaseolus vulgaris
Phvul.003G183400 Phaseolus vulgaris
Potri.006G241100 Populus trichocarpa
Potri.018G038900 Populus trichocarpa
PRCOL_00002279 Prasinoderma coloniale
Prupe.4G182300 Prunus persica
Prupe.4G182400 Prunus persica
Psat4g172920 Pisum sativum
PSO548G0003 Papaver somniferum
PSO548G0051 Papaver somniferum
PSO782G5188 Papaver somniferum
QL08p021656 Quercus lobata
RcHm_v2.0_Chr5g0034161 Rosa chinensis
RcHm_v2.0_CPg0501871 Rosa chinensis
RcHm_v2.0_CPg0501881 Rosa chinensis
Sabra06G0188500 Salix brachista
Sc16g0004450 Simmondsia chinensis
Sc20g0003000 Simmondsia chinensis
Sed0016999 Sechium edule
SEGI_33981 Sequoiadendron giganteum
SGA_v2.0_scaffold208G41997 Striga asiatica
SMO086G0055 Selaginella moellendorffii
SMO358G0035 Selaginella moellendorffii
Solyc00g500031.1 Solanum lycopersicum
Solyc00g500076.1 Solanum lycopersicum
Solyc12g098350.1 Solanum lycopersicum
Sopen12g033130 Solanum pennellii
Sp6g06240 Schrenkiella parvula
TAR375G0295 Trochodendron aralioides
THA.LOC104814832 Tarenaya hassleriana
Thecc.03G290100 Theobroma cacao
Thhalv10027382m.g Eutrema salsugineum
Thhalv10029051m.g Eutrema salsugineum
TPR.G40092 Trifolium pratense
VMungo1215G1991 Vigna mungo

User provided reference genes

Program Settings