Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20710 Brassica napus
A04p05920 Brassica napus
A04p28670 Brassica napus
A05p08430 Brassica napus
A09p46670 Brassica napus
A09p63020 Brassica napus
A09p63060 Brassica napus
Aa31LG10G9330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2592 Anthoceros agrestis
Actinidia05305 Actinidia chinensis
Actinidia11255 Actinidia chinensis
Actinidia13136 Actinidia chinensis
Actinidia19765 Actinidia chinensis
Ah.12g062360 Amaranthus hybridus
AL4G34040 Arabidopsis lyrata
AL5G34680 Arabidopsis lyrata
Aqoxy1G01039 Aquilegia oxysepala
Aqoxy2G02040 Aquilegia oxysepala
Aqoxy4G02988 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.023UF6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0ZTH3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KN9S33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PU4PH6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XA3BQV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XLY65R Arachis hypogaea
AT2G37550 Arabidopsis thaliana
AT3G53710 Arabidopsis thaliana
ATR0559G121 Amborella trichopoda
Atru.chr8.1945 Acer truncatum
AUR62041756 Chenopodium quinoa
AUR62043298 Chenopodium quinoa
BcaB01g00251 Brassica carinata
BcaB01g03771 Brassica carinata
BcaB02g08513 Brassica carinata
BcaB02g08514 Brassica carinata
BcaB02g09277 Brassica carinata
BcaB05g23274 Brassica carinata
BcaB06g29002 Brassica carinata
BcaC01g05611 Brassica carinata
BcaC02g09139 Brassica carinata
BcaC02g11863 Brassica carinata
BcaC07g39727 Brassica carinata
BcaC07g39728 Brassica carinata
BcaC07g41645 Brassica carinata
BcaC07g41647 Brassica carinata
BcaC08g47235 Brassica carinata
BcaC09g51150 Brassica carinata
BolC3t14832H Brassica oleracea
BolC4t22642H Brassica oleracea
BolC4t25456H Brassica oleracea
BolC5t34066H Brassica oleracea
BolC8t50502H Brassica oleracea
BraA03t11312Z Brassica rapa
BraA04t16296Z Brassica rapa
BraA04t18344Z Brassica rapa
BraA05t19808Z Brassica rapa
BraA09t40130Z Brassica rapa
BraA09t41659Z Brassica rapa
C01p16470 Brassica napus
C03p24340 Brassica napus
C04p05350 Brassica napus
C04p10440 Brassica napus
C04p38840 Brassica napus
C05p54000 Brassica napus
C06p50770 Brassica napus
C08p28990 Brassica napus
C08p46480 Brassica napus
CAN.G324.2 Capsicum annuum
CAN.G97.34 Capsicum annuum
CANSAT35G0658 Cannabis sativa
CARHR132060 Cardamine hirsuta
CARHR163600 Cardamine hirsuta
Carub.0004s1947 Capsella rubella
Carub.0005s2029 Capsella rubella
Ca_08780_v3 Cicer arietinum L.
Ca_09609_v3 Cicer arietinum L.
CBR_g17778 Chara braunii
Cc06_g02870 Coffea canephora
CDE04G1149 Ceratophyllum demersum
CDE04G2405 Ceratophyllum demersum
CDE07G0929 Ceratophyllum demersum
CDE07G1903 Ceratophyllum demersum
Cfa017417 Carpinus fangiana
Cfa024774 Carpinus fangiana
Ciclev10012277m.g Citrus clementina
Ciclev10013094m.g Citrus clementina
CiPaw.09G190100 Carya illinoinensis
ClCG10G021000 Citrullus lanatus
COL.COLO4_14842 Corchorus olitorius
Cpa.g.sc11.174 Carica papaya
Cre09.g386550 Chlamydomonas reinhardtii
CsaV3_3G035010 Cucumis sativus L.
CSS0003067 Camellia sinensis var. sinensis
CSS0025427 Camellia sinensis var. sinensis
CSS0047255 Camellia sinensis var. sinensis
DCAR_009588 Daucus carota
DCAR_017880 Daucus carota
Dinv35626 Davidia involucrata
Dinv37198 Davidia involucrata
Duzib093G1169 Durio zibethinus
Duzib106G1368 Durio zibethinus
Duzib128G1300 Durio zibethinus
ECA238G2922 Erigeron canadensis
ECA248G0585 Erigeron canadensis
EL10Ac5g11600 Beta vulgaris
Eucgr.K03154 Eucalyptus grandis
FAN05G5737 Fragaria x ananassa
FAN09G0953 Fragaria x ananassa
FAN14G3148 Fragaria x ananassa
FvH4_4g18180 Fragaria vesca
FvH4_6g14160 Fragaria vesca
Glyma.03G171800 Glycine max
Glyma.10G043600 Glycine max
Glyma.13G131300 Glycine max
Glyma.19G172700 Glycine max
Gohir.A01G220500 Gossypium hirsutum
Gohir.A04G081500 Gossypium hirsutum
Gohir.A09G157700 Gossypium hirsutum
Gohir.D01G209500 Gossypium hirsutum
Gohir.D04G120100 Gossypium hirsutum
Gohir.D08G111200 Gossypium hirsutum
Gohir.D09G153000 Gossypium hirsutum
Gorai.002G255000 Gossypium raimondii
Gorai.006G174500 Gossypium raimondii
Gorai.012G102200 Gossypium raimondii
GSVIVG01005028001 Vitis vinifera
GSVIVG01034212001 Vitis vinifera
HanXRQChr07g0196241 Helianthus annuus
HanXRQChr11g0349271 Helianthus annuus
Haze_20754 Corylus avellana
Haze_26485 Corylus avellana
Hma1.2p1_1065F.1_g253685 Hydrangea macrophylla
Hma1.2p1_1481F.1_g286130 Hydrangea macrophylla
Hma1.2p1_1707F.1_g298480 Hydrangea macrophylla
HPP92_015529 Vanilla planifolia
HPP92_021137 Vanilla planifolia
HPP92_028583 Vanilla planifolia
Lalb_Chr02g0153031 Lupinus albus
Lalb_Chr06g0171001 Lupinus albus
Lalb_Chr20g0113281 Lupinus albus
Lalb_Chr21g0314281 Lupinus albus
Lalb_Chr21g0314291 Lupinus albus
Lj1g0012032 Lotus japonicus
Lj2A2G30 Lonicera japonica
Lj2A98G41 Lonicera japonica
Lj3A970T59 Lonicera japonica
Lj5g0019116 Lotus japonicus
Lsat_1_v5_gn_1_55521 Lactuca sativa
Lsat_1_v5_gn_2_111481 Lactuca sativa
Lsat_1_v5_gn_2_111501 Lactuca sativa
Manes.09G087400 Manihot esculenta
Mapoly0088s0018 Marchantia polymorpha
MBI05_g10362_MAGBIO Magnolia biondii
MBI14_g24318_MAGBIO Magnolia biondii
MCO01G082 Micromonas commoda
MCO07G272 Micromonas commoda
MD02G1274200 Malus domestica
MD04G1124300 Malus domestica
MD12G1139600 Malus domestica
Medtr1g069000 Medicago truncatula
Medtr7g099830 Medicago truncatula
MELO3C009269.2 Cucumis melo
Migut.J00348 Erythranthe guttata
Migut.L01929 Erythranthe guttata
MSTRG.19098 Avicennia marina
MSTRG.26762 Avicennia marina
Nitab4.5_0000202g0200 Nicotiana tabacum
Nitab4.5_0000216g0100 Nicotiana tabacum
Nitab4.5_0000761g0010 Nicotiana tabacum
Nitab4.5_0004091g0010 Nicotiana tabacum
Nn2g10424 Nelumbo nucifera
Nn6g35178 Nelumbo nucifera
Oeu024360.2 Olea europaea
Oeu024726.1 Olea europaea
Oeu036163.1 Olea europaea
Oeu036164.1 Olea europaea
Oeu036165.1 Olea europaea
Oeu053936.1 Olea europaea
Oeu059170.1 Olea europaea
Oeu060046.1 Olea europaea
Oeu060047.1 Olea europaea
Os03g0278400 Oryza sativa ssp. japonica
Peaxi162Scf00094g01917 Petunia axillaris
Peaxi162Scf00165g01842 Petunia axillaris
PGR004G0650 Punica granatum
PGR004G0741 Punica granatum
PGSC0003DMG400008921 Solanum tuberosum
PGSC0003DMG401011001 Solanum tuberosum
Phvul.001G169400 Phaseolus vulgaris
Phvul.007G157400 Phaseolus vulgaris
Potri.006G084000 Populus trichocarpa
Potri.016G095100 Populus trichocarpa
Pp3c10_5430 Physcomitrium patens
Pp3c14_5240 Physcomitrium patens
PRCOL_00003645 Prasinoderma coloniale
Prupe.6G251500 Prunus persica
Psat0s350g0120 Pisum sativum
Psat6g065760 Pisum sativum
PSO339G0044 Papaver somniferum
PSO339G0722 Papaver somniferum
PSO339G5409 Papaver somniferum
PSO384G3513 Papaver somniferum
PSO648G0031 Papaver somniferum
QL03p017217 Quercus lobata
QL07p047529 Quercus lobata
QL07p047532 Quercus lobata
QL07p047727 Quercus lobata
QL07p047730 Quercus lobata
RcHm_v2.0_Chr3g0467101 Rosa chinensis
Rhsim05G0188400 Rhododendron simsii
Sabra06G0063700 Salix brachista
Sabra06G0063800 Salix brachista
SalBow4G1307 Salvia bowleyana
Sc01g0004240 Simmondsia chinensis
Sed0012263 Sechium edule
Sed0027255 Sechium edule
SGA_v2.0_scaffold35G14216 Striga asiatica
SGA_v2.0_scaffold94G28576 Striga asiatica
SMO147G0371 Selaginella moellendorffii
Solyc09g010520.3 Solanum lycopersicum
Solyc10g084690.2 Solanum lycopersicum
Sopen09g005250 Solanum pennellii
Sopen10g034130 Solanum pennellii
Sp4g19870 Schrenkiella parvula
Sp5g08670 Schrenkiella parvula
TAR369G0725 Trochodendron aralioides
TAR623G1730 Trochodendron aralioides
TAR633G1330 Trochodendron aralioides
TAR633G1341 Trochodendron aralioides
TAR636G0003 Trochodendron aralioides
TAR636G0753 Trochodendron aralioides
TAR636G1601 Trochodendron aralioides
THA.LOC104806570 Tarenaya hassleriana
Thecc.05G043300 Theobroma cacao
Thhalv10010333m.g Eutrema salsugineum
Thhalv10016645m.g Eutrema salsugineum
TPR.G22576 Trifolium pratense
TWI53G0560 Tripterygium wilfordii
TWI77G0646 Tripterygium wilfordii
unitig_26.g9199 Utricularia gibba
unitig_749.g14252 Utricularia gibba
vmacro20129 Vaccinium macrocarpon
VMungo0720G0923 Vigna mungo
VMungo1383G0260 Vigna mungo
Zm00001eb012610 Zea mays
Zm00001eb117680 Zea mays
Zm00001eb397550 Zea mays

User provided reference genes

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