Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25340 Brassica napus
A05p03300 Brassica napus
A06p42120 Brassica napus
Aa31LG4G17180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1545 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1740 Anthoceros agrestis
Actinidia25568 Actinidia chinensis
Actinidia26710 Actinidia chinensis
Actinidia36724 Actinidia chinensis
Ah.09g224860 Amaranthus hybridus
Ah.11g045440 Amaranthus hybridus
AL5G28010 Arabidopsis lyrata
AL6G12150 Arabidopsis lyrata
Aqoxy3G00597 Aquilegia oxysepala
Aqoxy5G00561 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.881M8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KGMC0X Arachis hypogaea
AT3G48560 Arabidopsis thaliana
ATR0561G089 Amborella trichopoda
ATR0752G102 Amborella trichopoda
ATR0752G232 Amborella trichopoda
ATR1096G098 Amborella trichopoda
AUR62003521 Chenopodium quinoa
AUR62017833 Chenopodium quinoa
AUR62017834 Chenopodium quinoa
AUR62017835 Chenopodium quinoa
AUR62029606 Chenopodium quinoa
AUR62034831 Chenopodium quinoa
AUR62044458 Chenopodium quinoa
BcaB03g11782 Brassica carinata
BcaB05g23006 Brassica carinata
BcaC06g31073 Brassica carinata
BcaC06g33914 Brassica carinata
BcaC09g49879 Brassica carinata
BcaC09g49880 Brassica carinata
BolC1t03114H Brassica oleracea
BolC7t44058H Brassica oleracea
BolC8t49989H Brassica oleracea
BolC8t49990H Brassica oleracea
BolC8t49991H Brassica oleracea
BraA01t02444Z Brassica rapa
BraA05t19319Z Brassica rapa
BraA06t27129Z Brassica rapa
C01p32280 Brassica napus
C07p35330 Brassica napus
C08p23600 Brassica napus
C08p23610 Brassica napus
C08p23620 Brassica napus
CAN.G46.9 Capsicum annuum
CANSAT80G2425 Cannabis sativa
CARHR157360 Cardamine hirsuta
Carub.0005s1475 Capsella rubella
Ca_00309_v3 Cicer arietinum L.
Ca_00314_v3 Cicer arietinum L.
Ca_16049_v3 Cicer arietinum L.
Ca_29261_v3 Cicer arietinum L.
CBR_g18887 Chara braunii
CBR_g42125 Chara braunii
CBR_g8110 Chara braunii
CBR_g8112 Chara braunii
CBR_g8113 Chara braunii
CBR_g8138 Chara braunii
Cc10_g00510 Coffea canephora
CDE08G0856 Ceratophyllum demersum
Cfa010011 Carpinus fangiana
Cfa018790 Carpinus fangiana
Cfa026079 Carpinus fangiana
Cfa026087 Carpinus fangiana
Ciclev10006468m.g Citrus clementina
Ciclev10007130m.g Citrus clementina
Ciclev10030907m.g Citrus clementina
CiPaw.11G006500 Carya illinoinensis
ClCG06G017910 Citrullus lanatus
COL.COLO4_00063 Corchorus olitorius
Cpa.g.sc13.109 Carica papaya
Cre09.g386758 Chlamydomonas reinhardtii
CsaV3_1G000560 Cucumis sativus L.
CSS0023817 Camellia sinensis var. sinensis
CSS0024943 Camellia sinensis var. sinensis
CSS0039537 Camellia sinensis var. sinensis
DCAR_007493 Daucus carota
DCAR_021621 Daucus carota
Dinv02539 Davidia involucrata
Dinv11176 Davidia involucrata
Dinv11226 Davidia involucrata
Dinv23153 Davidia involucrata
Duzib175G0008 Durio zibethinus
Duzib212G0411 Durio zibethinus
Duzib268G0783 Durio zibethinus
ECA232G1339 Erigeron canadensis
EL10Ac5g11406 Beta vulgaris
Eucgr.B00108 Eucalyptus grandis
Eucgr.B00109 Eucalyptus grandis
Eucgr.B00110 Eucalyptus grandis
Eucgr.K02720 Eucalyptus grandis
FAN01G2771 Fragaria x ananassa
FAN03G1565 Fragaria x ananassa
FAN06G1916 Fragaria x ananassa
FAN10G3895 Fragaria x ananassa
FAN18G3627 Fragaria x ananassa
FvH4_5g20550 Fragaria vesca
FvH4_7g06770 Fragaria vesca
Glyma.01G070700 Glycine max
Glyma.04G196100 Glycine max
Glyma.06G169700 Glycine max
Glyma.13G241000 Glycine max
Glyma.15G072500 Glycine max
Gohir.A02G012201 Gossypium hirsutum
Gohir.A02G012202 Gossypium hirsutum
Gohir.A02G012300 Gossypium hirsutum
Gohir.A10G138800 Gossypium hirsutum
Gohir.D02G013000 Gossypium hirsutum
Gohir.D02G013100 Gossypium hirsutum
Gohir.D10G128000 Gossypium hirsutum
Gorai.005G016500 Gossypium raimondii
Gorai.005G016600 Gossypium raimondii
Gorai.011G141100 Gossypium raimondii
GSVIVG01008550001 Vitis vinifera
GSVIVG01018584001 Vitis vinifera
GSVIVG01018586001 Vitis vinifera
GSVIVG01018588001 Vitis vinifera
GSVIVG01018591001 Vitis vinifera
GSVIVG01018593001 Vitis vinifera
GSVIVG01033088001 Vitis vinifera
HanXRQChr02g0034691 Helianthus annuus
HanXRQChr09g0273191 Helianthus annuus
Haze_07132 Corylus avellana
Haze_07133 Corylus avellana
Hma1.2p1_0014F.1_g009360 Hydrangea macrophylla
HPP92_000878 Vanilla planifolia
HPP92_000879 Vanilla planifolia
HPP92_000885 Vanilla planifolia
HPP92_001832 Vanilla planifolia
HPP92_004961 Vanilla planifolia
Lalb_Chr20g0121961 Lupinus albus
Lj1g0017329 Lotus japonicus
Lj6g0017314 Lotus japonicus
Lj9P479T33 Lonicera japonica
Lsat_1_v5_gn_1_33140 Lactuca sativa
Lsat_1_v5_gn_1_33180 Lactuca sativa
Lsat_1_v5_gn_4_80820 Lactuca sativa
Manes.06G001200 Manihot esculenta
Manes.06G120100 Manihot esculenta
Manes.15G161400 Manihot esculenta
Manes.17G007500 Manihot esculenta
Mapoly0088s0092 Marchantia polymorpha
MBI07_g39450_MAGBIO Magnolia biondii
MBI16_g26408_MAGBIO Magnolia biondii
MBI16_g26409_MAGBIO Magnolia biondii
MBI16_g31470_MAGBIO Magnolia biondii
MCO08G154 Micromonas commoda
MD06G1028700 Malus domestica
MD10G1013700 Malus domestica
Medtr2g013120 Medicago truncatula
Medtr2g027200 Medicago truncatula
Medtr2g027220 Medicago truncatula
Medtr3g099190 Medicago truncatula
MELO3C026205.2 Cucumis melo
Migut.D01268 Erythranthe guttata
Migut.I00533 Erythranthe guttata
Migut.N00877 Erythranthe guttata
MSTRG.11276 Avicennia marina
Nitab4.5_0001530g0160 Nicotiana tabacum
Nitab4.5_0010961g0010 Nicotiana tabacum
Nitab4.5_0011199g0020 Nicotiana tabacum
Nn1g08711 Nelumbo nucifera
Nn2g13063 Nelumbo nucifera
Nn5g28175 Nelumbo nucifera
Nn5g28176 Nelumbo nucifera
Nn5g28177 Nelumbo nucifera
Oeu005003.1 Olea europaea
Oeu018541.1 Olea europaea
Os02g0510200 Oryza sativa ssp. japonica
Os04g0389100 Oryza sativa ssp. japonica
Os04g0389800 Oryza sativa ssp. japonica
Peaxi162Scf00377g00074 Petunia axillaris
Peaxi162Scf00591g00413 Petunia axillaris
PGR083G1230 Punica granatum
PGSC0003DMG400007078 Solanum tuberosum
PGSC0003DMG400013027 Solanum tuberosum
PGSC0003DMG400034102 Solanum tuberosum
Phvul.006G187400 Phaseolus vulgaris
Phvul.009G166100 Phaseolus vulgaris
Phvul.009G222201 Phaseolus vulgaris
Potri.012G098300 Populus trichocarpa
Potri.015G097200 Populus trichocarpa
Pp3c10_21800 Physcomitrium patens
Pp3c13_6640 Physcomitrium patens
Pp3c20_22440 Physcomitrium patens
Pp3c26_13760 Physcomitrium patens
Pp3c26_13770 Physcomitrium patens
PRCOL_00003526 Prasinoderma coloniale
Prupe.5G043100 Prunus persica
Prupe.8G001300 Prunus persica
Psat0s3906g0040 Pisum sativum
Psat1g205600 Pisum sativum
Psat1g206240 Pisum sativum
Psat5g051480 Pisum sativum
PSO017G3090 Papaver somniferum
PSO478G0593 Papaver somniferum
QL10p002814 Quercus lobata
QL10p002843 Quercus lobata
RcHm_v2.0_Chr6g0249401 Rosa chinensis
RcHm_v2.0_Chr7g0208791 Rosa chinensis
RcHm_v2.0_Chr7g0208801 Rosa chinensis
Rhsim08G0190500 Rhododendron simsii
Sabra12G0071700 Salix brachista
Sabra15G0117800 Salix brachista
Sabra15G0117900 Salix brachista
Sc04g0005870 Simmondsia chinensis
Sc04g0005880 Simmondsia chinensis
Sc22g0003800 Simmondsia chinensis
Sed0003955 Sechium edule
Sed0017429 Sechium edule
SEGI_07207 Sequoiadendron giganteum
SEGI_13572 Sequoiadendron giganteum
SEGI_17803 Sequoiadendron giganteum
SGA_v2.0_scaffold215G42341 Striga asiatica
SGA_v2.0_scaffold649G53352 Striga asiatica
SHI14331 Sapria himalayana
SMO118G0217 Selaginella moellendorffii
SMO118G0480 Selaginella moellendorffii
SMO298G0030 Selaginella moellendorffii
SMO341G0009 Selaginella moellendorffii
Solyc03g044330.1 Solanum lycopersicum
Solyc06g059880.3 Solanum lycopersicum
Solyc07g061940.4 Solanum lycopersicum
Sopen03g008440 Solanum pennellii
Sopen06g019960 Solanum pennellii
Sopen07g030210 Solanum pennellii
Sp5g13420 Schrenkiella parvula
TAR371G0575 Trochodendron aralioides
TAR622G0236 Trochodendron aralioides
TAR629G0881 Trochodendron aralioides
THA.LOC104818184 Tarenaya hassleriana
THA.LOC104821520 Tarenaya hassleriana
Thecc.04G176500 Theobroma cacao
Thhalv10010177m.g Eutrema salsugineum
Thhalv10011030m.g Eutrema salsugineum
TPR.G14204 Trifolium pratense
TPR.G36762 Trifolium pratense
TWI12G0787 Tripterygium wilfordii
TWI32G0594 Tripterygium wilfordii
TWI56G0015 Tripterygium wilfordii
unitig_26.g9287 Utricularia gibba
vmacro19196 Vaccinium macrocarpon
vmacro23016 Vaccinium macrocarpon
VMungo0074G0001 Vigna mungo
VMungo0540G1422 Vigna mungo
VMungo1309G1476 Vigna mungo
VMungo1309G1609 Vigna mungo
Zm00001eb180890 Zea mays
Zm00001eb241810 Zea mays

User provided reference genes

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