Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p24030 Brassica napus
A04p24050 Brassica napus
A05p14410 Brassica napus
A05p14420 Brassica napus
A10p04800 Brassica napus
Aa31LG1G7190 Aethionema arabicum
Aa31LG5G5710 Aethionema arabicum
Actinidia05815 Actinidia chinensis
Actinidia31749 Actinidia chinensis
Ah.00g237900 Amaranthus hybridus
Ah.01g011820 Amaranthus hybridus
Ah.05g177240 Amaranthus hybridus
Ah.10g028040 Amaranthus hybridus
AL1G16130 Arabidopsis lyrata
AL4G26410 Arabidopsis lyrata
AL4G26420 Arabidopsis lyrata
AL4G26440 Arabidopsis lyrata
Aqoxy3G02033 Aquilegia oxysepala
Aqoxy5G01150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05VK9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1NS2SJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7T4HVK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ALCT10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DCX3MH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H3ZLJ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KVSP8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P97QTY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PSS1NY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8C2S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPIP6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XQL2BY Arachis hypogaea
AT1G06170 Arabidopsis thaliana
AT2G31210 Arabidopsis thaliana
AT2G31215 Arabidopsis thaliana
AT2G31220 Arabidopsis thaliana
ATR0829G155 Amborella trichopoda
Atru.chr12.829 Acer truncatum
Atru.chr6.2608 Acer truncatum
Atru.chr8.7 Acer truncatum
AUR62014519 Chenopodium quinoa
AUR62032672 Chenopodium quinoa
AUR62035295 Chenopodium quinoa
AUR62038015 Chenopodium quinoa
BcaB02g06818 Brassica carinata
BcaB02g10374 Brassica carinata
BcaB02g11104 Brassica carinata
BcaB03g15789 Brassica carinata
BcaB06g28430 Brassica carinata
BcaB06g28431 Brassica carinata
BcaB06g28432 Brassica carinata
BcaB06g28515 Brassica carinata
BcaB06g28516 Brassica carinata
BcaC02g11210 Brassica carinata
BcaC02g11211 Brassica carinata
BcaC05g24299 Brassica carinata
BolC4t23450H Brassica oleracea
BolC4t23452H Brassica oleracea
BolC4t27561H Brassica oleracea
BolC4t27562H Brassica oleracea
BolC5t29220H Brassica oleracea
BraA04t17924Z Brassica rapa
BraA04t17925Z Brassica rapa
BraA05t20369Z Brassica rapa
BraA05t20370Z Brassica rapa
BraA10t42748Z Brassica rapa
C04p19170 Brassica napus
C04p19190 Brassica napus
C04p60720 Brassica napus
C04p60730 Brassica napus
C05p04490 Brassica napus
CAN.G700.26 Capsicum annuum
CAN.G700.27 Capsicum annuum
CANSAT25G2627 Cannabis sativa
CARHR005700 Cardamine hirsuta
CARHR124810 Cardamine hirsuta
CARHR124820 Cardamine hirsuta
Carub.0001s0553 Capsella rubella
Carub.0004s1249 Capsella rubella
Carub.0004s1250 Capsella rubella
Ca_18228_v3 Cicer arietinum L.
Ca_18230_v3 Cicer arietinum L.
Cc02_g26300 Coffea canephora
CDE01G0783 Ceratophyllum demersum
CDE02G2384 Ceratophyllum demersum
CDE11G0990 Ceratophyllum demersum
CDE12G0280 Ceratophyllum demersum
Cfa003674 Carpinus fangiana
Ciclev10006940m.g Citrus clementina
Ciclev10019669m.g Citrus clementina
CiPaw.13G149600 Carya illinoinensis
CiPaw.13G149800 Carya illinoinensis
ClCG06G008120 Citrullus lanatus
COL.COLO4_19335 Corchorus olitorius
CsaV3_2G011050 Cucumis sativus L.
CSS0026946 Camellia sinensis var. sinensis
CSS0031913 Camellia sinensis var. sinensis
CSS0035517 Camellia sinensis var. sinensis
DCAR_025008 Daucus carota
DCAR_029561 Daucus carota
Dinv09467 Davidia involucrata
Dinv43535 Davidia involucrata
Dinv43981 Davidia involucrata
Duzib128G1731 Durio zibethinus
ECA234G2181 Erigeron canadensis
ECA248G1803 Erigeron canadensis
EL10Ac1g00672 Beta vulgaris
EL10Ac3g06800 Beta vulgaris
Eucgr.E04246 Eucalyptus grandis
Eucgr.E04247 Eucalyptus grandis
FAN01G2882 Fragaria x ananassa
FAN03G0863 Fragaria x ananassa
FAN03G2441 Fragaria x ananassa
FAN06G4435 Fragaria x ananassa
FAN10G3660 Fragaria x ananassa
FvH4_7g02380 Fragaria vesca
FvH4_7g07050 Fragaria vesca
Glyma.05G134400 Glycine max
Glyma.08G089100 Glycine max
Glyma.08G269300 Glycine max
Glyma.08G269366 Glycine max
Glyma.16G090900 Glycine max
Gohir.A06G158500 Gossypium hirsutum
Gohir.A06G158600 Gossypium hirsutum
Gohir.D04G071900 Gossypium hirsutum
Gohir.D06G164400 Gossypium hirsutum
Gohir.D06G164500 Gossypium hirsutum
Gorai.010G191800 Gossypium raimondii
Gorai.010G191900 Gossypium raimondii
Gorai.012G081100 Gossypium raimondii
GSVIVG01011330001 Vitis vinifera
HanXRQChr03g0088191 Helianthus annuus
HanXRQChr11g0344001 Helianthus annuus
HanXRQChr16g0522691 Helianthus annuus
Haze_15815 Corylus avellana
Haze_15816 Corylus avellana
Hma1.2p1_0420F.1_g149790 Hydrangea macrophylla
Hma1.2p1_2755F.1_g327970 Hydrangea macrophylla
HPP92_013503 Vanilla planifolia
HPP92_013504 Vanilla planifolia
HPP92_014838 Vanilla planifolia
HPP92_014839 Vanilla planifolia
HPP92_027559 Vanilla planifolia
Hund17163 Selenicereus undatus
Lalb_Chr07g0188211 Lupinus albus
Lalb_Chr09g0334541 Lupinus albus
Lalb_Chr12g0209161 Lupinus albus
Lalb_Chr12g0209171 Lupinus albus
Lj4g0001908 Lotus japonicus
Lj4g0018416 Lotus japonicus
Lj4g0026815 Lotus japonicus
Lj4g0027774 Lotus japonicus
Lj7A558T38 Lonicera japonica
Lj7A558T39 Lonicera japonica
Lsat_1_v5_gn_1_85520 Lactuca sativa
Lsat_1_v5_gn_4_40321 Lactuca sativa
Manes.07G013000 Manihot esculenta
Manes.07G013050 Manihot esculenta
Manes.10G132400 Manihot esculenta
Mapoly0021s0100 Marchantia polymorpha
Mapoly0021s0101 Marchantia polymorpha
Mapoly0021s0102 Marchantia polymorpha
Mapoly0031s0074 Marchantia polymorpha
Mapoly0031s0075 Marchantia polymorpha
Mapoly0031s0076 Marchantia polymorpha
MBI04_g21140_MAGBIO Magnolia biondii
MD02G1240400 Malus domestica
MD02G1240500 Malus domestica
MD07G1076400 Malus domestica
MD07G1076500 Malus domestica
Medtr1g056700 Medicago truncatula
Medtr4g094758 Medicago truncatula
Medtr4g094762 Medicago truncatula
MELO3C020370.2 Cucumis melo
Migut.N01685 Erythranthe guttata
Migut.N01686 Erythranthe guttata
Nitab4.5_0000050g0090 Nicotiana tabacum
Nitab4.5_0000592g0300 Nicotiana tabacum
Nitab4.5_0004412g0070 Nicotiana tabacum
Nitab4.5_0004594g0050 Nicotiana tabacum
Nitab4.5_0012200g0010 Nicotiana tabacum
Nn1g02001 Nelumbo nucifera
Nn3g19279 Nelumbo nucifera
Oeu060682.1 Olea europaea
Oeu060684.1 Olea europaea
Oeu060686.1 Olea europaea
Os01g0293100 Oryza sativa ssp. japonica
Os04g0599300 Oryza sativa ssp. japonica
Peaxi162Scf00245g00319 Petunia axillaris
Peaxi162Scf00245g00324 Petunia axillaris
Peaxi162Scf00592g00445 Petunia axillaris
Peaxi162Scf00592g00446 Petunia axillaris
PGR042G1208 Punica granatum
PGR042G3537 Punica granatum
PGSC0003DMG400001791 Solanum tuberosum
PGSC0003DMG400036434 Solanum tuberosum
Phvul.002G187950 Phaseolus vulgaris
Phvul.003G281300 Phaseolus vulgaris
Potri.006G202100 Populus trichocarpa
Potri.009G023800 Populus trichocarpa
Potri.016G068500 Populus trichocarpa
Pp3c5_20560 Physcomitrium patens
Pp3c6_8660 Physcomitrium patens
Prupe.2G097200 Prunus persica
Prupe.2G097400 Prunus persica
Psat7g087680 Pisum sativum
PSO063G5588 Papaver somniferum
PSO478G0748 Papaver somniferum
PSO782G0461 Papaver somniferum
PSO782G1354 Papaver somniferum
QL04p052179 Quercus lobata
RcHm_v2.0_Chr1g0337011 Rosa chinensis
Rhsim01G0134100 Rhododendron simsii
Rhsim01G0134800 Rhododendron simsii
Rhsim07G0044100 Rhododendron simsii
Sabra06G0155400 Salix brachista
Sabra16G0069500 Salix brachista
SalBow4G0249 Salvia bowleyana
SalBow4G0764 Salvia bowleyana
SalBow4G1080 Salvia bowleyana
SalBow4G1996 Salvia bowleyana
SalBow4G2369 Salvia bowleyana
SalBow4G3022 Salvia bowleyana
Sc26g0002000 Simmondsia chinensis
Sed0003196 Sechium edule
Sed0025686 Sechium edule
Sed0026777 Sechium edule
SEGI_18151 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02211 Striga asiatica
SMO356G0362 Selaginella moellendorffii
SMO367G0040 Selaginella moellendorffii
Solyc01g081090.2 Solanum lycopersicum
Solyc01g081100.3 Solanum lycopersicum
Sopen01g032710 Solanum pennellii
Sp1g04980 Schrenkiella parvula
Sp4g13700 Schrenkiella parvula
Sp4g13710 Schrenkiella parvula
THA.LOC104800872 Tarenaya hassleriana
Thecc.10G002900 Theobroma cacao
Thhalv10009992m.g Eutrema salsugineum
Thhalv10016616m.g Eutrema salsugineum
Thhalv10017830m.g Eutrema salsugineum
Thhalv10017908m.g Eutrema salsugineum
TPR.G23841 Trifolium pratense
TWI14G0450 Tripterygium wilfordii
TWI23G0406 Tripterygium wilfordii
TWI59G0602 Tripterygium wilfordii
unitig_43.g31046 Utricularia gibba
unitig_578.g16500 Utricularia gibba
unitig_85.g27218 Utricularia gibba
vmacro13577 Vaccinium macrocarpon
VMungo0251G0109 Vigna mungo
VMungo0251G2843 Vigna mungo
Zm00001eb251650 Zea mays
Zm00001eb332170 Zea mays

User provided reference genes

Program Settings