Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04420 Brassica napus
A08p07900 Brassica napus
A10p21710 Brassica napus
Aa31LG11G11860 Aethionema arabicum
Aa31LG6G9020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5173 Anthoceros agrestis
Actinidia02583 Actinidia chinensis
Actinidia37839 Actinidia chinensis
Ah.07g205270 Amaranthus hybridus
Ah.12g062070 Amaranthus hybridus
Ah.16g109720 Amaranthus hybridus
AL1G51030 Arabidopsis lyrata
AL6G28800 Arabidopsis lyrata
Aqoxy1G00359 Aquilegia oxysepala
Aqoxy6G00149 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.312JJI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AL94LI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQ5T6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CV0BIZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5J3RW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PPJ6CE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3SKWA Arachis hypogaea
AT1G36390 Arabidopsis thaliana
AT5G17710 Arabidopsis thaliana
ATR0068G090 Amborella trichopoda
ATR0584G063 Amborella trichopoda
Atru.chr13.1306 Acer truncatum
Atru.chr2.1576 Acer truncatum
AUR62004682 Chenopodium quinoa
AUR62023600 Chenopodium quinoa
AUR62036503 Chenopodium quinoa
AUR62037072 Chenopodium quinoa
BcaB08g36749 Brassica carinata
BcaC03g13537 Brassica carinata
BcaC04g18765 Brassica carinata
BcaC07g37488 Brassica carinata
BolC2t06835H Brassica oleracea
BolC8t47805H Brassica oleracea
BolC9t58784H Brassica oleracea
BraA02t05406Z Brassica rapa
BraA08t32810Z Brassica rapa
BraA10t44232Z Brassica rapa
C02p09270 Brassica napus
C09p59440 Brassica napus
CAN.G128.114 Capsicum annuum
CAN.G993.38 Capsicum annuum
CANSAT25G1044 Cannabis sativa
CANSAT78G2500 Cannabis sativa
CARHR035040 Cardamine hirsuta
CARHR195470 Cardamine hirsuta
Carub.0001s3376 Capsella rubella
Carub.0006s1595 Capsella rubella
Ca_03436_v3 Cicer arietinum L.
Ca_25766_v3 Cicer arietinum L.
CBR_g37635 Chara braunii
Cc01_g05820 Coffea canephora
CDE02G2036 Ceratophyllum demersum
CDE04G2383 Ceratophyllum demersum
CDE06G0979 Ceratophyllum demersum
CDE08G1637 Ceratophyllum demersum
Cfa015950 Carpinus fangiana
Ciclev10001980m.g Citrus clementina
Ciclev10031794m.g Citrus clementina
CiPaw.05G230100 Carya illinoinensis
CiPaw.10G124500 Carya illinoinensis
ClCG04G006040 Citrullus lanatus
ClCG08G010900 Citrullus lanatus
COL.COLO4_16530 Corchorus olitorius
COL.COLO4_38562 Corchorus olitorius
Cpa.g.sc49.121 Carica papaya
Cpa.g.sc73.20 Carica papaya
Cre07.g341600 Chlamydomonas reinhardtii
Cre14.g632000 Chlamydomonas reinhardtii
CsaV3_1G023030 Cucumis sativus L.
CsaV3_4G029080 Cucumis sativus L.
CSS0030574 Camellia sinensis var. sinensis
CSS0046415 Camellia sinensis var. sinensis
DCAR_013500 Daucus carota
DCAR_016953 Daucus carota
DCAR_016954 Daucus carota
Dinv26728 Davidia involucrata
Dinv27391 Davidia involucrata
Duzib093G0586 Durio zibethinus
Duzib128G1454 Durio zibethinus
Duzib177G1040 Durio zibethinus
ECA236G4317 Erigeron canadensis
ECA246G1914 Erigeron canadensis
EL10Ac1g00047 Beta vulgaris
EL10Ac8g19572 Beta vulgaris
Eucgr.F04384 Eucalyptus grandis
Eucgr.K01549 Eucalyptus grandis
FAN04G3156 Fragaria x ananassa
FAN08G0219 Fragaria x ananassa
FAN13G3221 Fragaria x ananassa
FAN18G3230 Fragaria x ananassa
FAN19G0031 Fragaria x ananassa
FAN23G2367 Fragaria x ananassa
FAN26G2305 Fragaria x ananassa
FAN28G1428 Fragaria x ananassa
FvH4_1g29620 Fragaria vesca
FvH4_5g38490 Fragaria vesca
Glyma.03G005900 Glycine max
Glyma.06G108000 Glycine max
Glyma.19G120100 Glycine max
Gohir.A05G231200 Gossypium hirsutum
Gohir.A11G224204 Gossypium hirsutum
Gohir.A13G160200 Gossypium hirsutum
Gohir.D05G233700 Gossypium hirsutum
Gohir.D11G237900 Gossypium hirsutum
Gohir.D13G165400 Gossypium hirsutum
Gorai.007G251400 Gossypium raimondii
Gorai.009G241800 Gossypium raimondii
Gorai.013G197200 Gossypium raimondii
GSVIVG01008951001 Vitis vinifera
GSVIVG01029905001 Vitis vinifera
HanXRQChr04g0125461 Helianthus annuus
HanXRQChr08g0229261 Helianthus annuus
Haze_00538 Corylus avellana
Haze_20372 Corylus avellana
Haze_20373 Corylus avellana
Hma1.2p1_0165F.1_g073380 Hydrangea macrophylla
Hma1.2p1_0251F.1_g102600 Hydrangea macrophylla
Hma1.2p1_1215F.1_g267610 Hydrangea macrophylla
HPP92_005741 Vanilla planifolia
HPP92_015869 Vanilla planifolia
HPP92_017471 Vanilla planifolia
Hund16817 Selenicereus undatus
Lalb_Chr11g0065631 Lupinus albus
Lalb_Chr14g0365041 Lupinus albus
Lalb_Chr14g0365051 Lupinus albus
Lalb_Chr22g0358381 Lupinus albus
Lalb_Chr22g0358391 Lupinus albus
Lj1g0018873 Lotus japonicus
Lj1g0021040 Lotus japonicus
Lj4A547G40 Lonicera japonica
Lj4A576G35 Lonicera japonica
Lsat_1_v5_gn_6_111081 Lactuca sativa
Lsat_1_v5_gn_8_85320 Lactuca sativa
Manes.02G158100 Manihot esculenta
Manes.08G150500 Manihot esculenta
Manes.09G135400 Manihot esculenta
Manes.18G072300 Manihot esculenta
Mapoly0164s0013 Marchantia polymorpha
MBI16_g07655_MAGBIO Magnolia biondii
MBI19_g30305_MAGBIO Magnolia biondii
MCO07G082 Micromonas commoda
MD00G1103800 Malus domestica
MD12G1014200 Malus domestica
MD14G1011600 Malus domestica
MD15G1359500 Malus domestica
Medtr3g073450 Medicago truncatula
Medtr7g087250 Medicago truncatula
MELO3C011373.2 Cucumis melo
MELO3C019156.2 Cucumis melo
Migut.J01582 Erythranthe guttata
Migut.N03330 Erythranthe guttata
MSTRG.19756 Avicennia marina
MSTRG.24143 Avicennia marina
Nitab4.5_0000051g0240 Nicotiana tabacum
Nitab4.5_0000062g0450 Nicotiana tabacum
Nitab4.5_0003690g0030 Nicotiana tabacum
Nitab4.5_0004737g0070 Nicotiana tabacum
Nitab4.5_0008337g0050 Nicotiana tabacum
Nn2g14731 Nelumbo nucifera
Nn5g27937 Nelumbo nucifera
Oeu001998.1 Olea europaea
Oeu020253.1 Olea europaea
Oeu020254.1 Olea europaea
Oeu042065.1 Olea europaea
Oeu060733.1 Olea europaea
Os02g0612000 Oryza sativa ssp. japonica
Os04g0431100 Oryza sativa ssp. japonica
Peaxi162Scf00153g00815 Petunia axillaris
Peaxi162Scf01080g00006 Petunia axillaris
PGR142G3783 Punica granatum
PGSC0003DMG400006539 Solanum tuberosum
PGSC0003DMG400028115 Solanum tuberosum
Phvul.001G108000 Phaseolus vulgaris
Phvul.009G026300 Phaseolus vulgaris
Potri.002G090000 Populus trichocarpa
Potri.005G171201 Populus trichocarpa
Potri.013G067900 Populus trichocarpa
Pp3c12_24950 Physcomitrium patens
Pp3c4_3730 Physcomitrium patens
PRCOL_00004514 Prasinoderma coloniale
Prupe.1G507100 Prunus persica
Prupe.7G026500 Prunus persica
Psat3g085320 Pisum sativum
Psat5g135800 Pisum sativum
PSO017G2310 Papaver somniferum
PSO063G3717 Papaver somniferum
PSO170G1486 Papaver somniferum
PSO170G3803 Papaver somniferum
PSO339G1339 Papaver somniferum
PSO384G3705 Papaver somniferum
PSO541G1378 Papaver somniferum
PSO675G1830 Papaver somniferum
QL07p016316 Quercus lobata
QL07p016392 Quercus lobata
QL12p035427 Quercus lobata
RcHm_v2.0_Chr3g0495651 Rosa chinensis
RcHm_v2.0_Chr7g0240521 Rosa chinensis
RcHm_v2.0_Chr7g0240551 Rosa chinensis
RcHm_v2.0_Chr7g0240561 Rosa chinensis
Rhsim03G0045300 Rhododendron simsii
Rhsim06G0110000 Rhododendron simsii
Sabra02G0070900 Salix brachista
Sabra13G0059300 Salix brachista
SalBow6G4699 Salvia bowleyana
SalBow6G6452 Salvia bowleyana
SalBow6G6564 Salvia bowleyana
Sc01g0001600 Simmondsia chinensis
Sc07g0007660 Simmondsia chinensis
Sed0004230 Sechium edule
Sed0006125 Sechium edule
Sed0015738 Sechium edule
SEGI_18467 Sequoiadendron giganteum
SEGI_30184 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11088 Striga asiatica
SGA_v2.0_scaffold66G22335 Striga asiatica
SGA_v2.0_scaffold69G23204 Striga asiatica
SMO351G0488 Selaginella moellendorffii
Solyc10g081240.3 Solanum lycopersicum
Solyc11g013380.1 Solanum lycopersicum
Solyc11g013390.3 Solanum lycopersicum
Sopen10g031740 Solanum pennellii
Sopen11g008400 Solanum pennellii
Sp1g31140 Schrenkiella parvula
Sp6g26510 Schrenkiella parvula
TAR293G0002 Trochodendron aralioides
TAR369G0107 Trochodendron aralioides
TAR623G1258 Trochodendron aralioides
TAR633G2275 Trochodendron aralioides
THA.LOC104820807 Tarenaya hassleriana
THA.LOC104827469 Tarenaya hassleriana
Thecc.05G237600 Theobroma cacao
Thecc.08G115800 Theobroma cacao
Thhalv10014120m.g Eutrema salsugineum
Thhalv10025813m.g Eutrema salsugineum
TPR.G16369 Trifolium pratense
TPR.G29591 Trifolium pratense
TPR.G32939 Trifolium pratense
TWI34G1915 Tripterygium wilfordii
TWI36G0527 Tripterygium wilfordii
TWI60G0919 Tripterygium wilfordii
unitig_0.g589 Utricularia gibba
unitig_578.g16297 Utricularia gibba
vmacro07631 Vaccinium macrocarpon
vmacro12527 Vaccinium macrocarpon
VMungo1309G2912 Vigna mungo
VMungo1383G1873 Vigna mungo
Zm00001eb082750 Zea mays
Zm00001eb184510 Zea mays
Zm00001eb246870 Zea mays
Zm00001eb422570 Zea mays

User provided reference genes

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