Gene: AT5G17710
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G17710
- Transcript Identifier AT5G17710.1
- Gene Type Coding gene
- Location Chr5 : 5839560-5841639 : negative
Gene Family Information
- ID HOM05D002692
- #Genes/#Species 255/99
- Phylogenetic origin
- ID ORTHO05D002971
- #Genes/#Species 251/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G17710.1
- symbol EMB1241
- full_name embryo defective 1241
- uniprot Q94K56
Descriptions
- Description Co-chaperone GrpE family protein
- Computational description embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034605 | IGI | Gene Ontology | cellular response to heat | 1 |
| GO:0006457 | IDA IEA | Gene Ontology | protein folding | 1 |
| GO:0006457 | IEA | InterPro | protein folding | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0030150 | IBA | Gene Ontology | protein import into mitochondrial matrix | 2 |
| GO:0050821 | IGI | Gene Ontology | protein stabilization | 1 |
| GO:0009793 | NAS | Gene Ontology | embryo development ending in seed dormancy |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051087 | IEA | Gene Ontology | chaperone binding | |
| GO:0051087 | IEA | InterPro | chaperone binding | |
| GO:0042803 | IEA | Gene Ontology | protein homodimerization activity | |
| GO:0042803 | IEA | InterPro | protein homodimerization activity | |
| GO:0000774 | IBA IEA | Gene Ontology | adenyl-nucleotide exchange factor activity | 2 |
| GO:0000774 | IEA | InterPro | adenyl-nucleotide exchange factor activity | |
| GO:0051082 | IBA | Gene Ontology | unfolded protein binding | 2 |
| GO:0043621 | IPI | Gene Ontology | protein self-association | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0005507 | HDA | Gene Ontology | copper ion binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005759 | IEA | GOA Database | mitochondrial matrix | |
| GO:0009507 | IDA, HDA IBA | Gene Ontology | chloroplast | 2 3 5 |
| GO:0001405 | IBA | Gene Ontology | PAM complex, Tim23 associated import motor | 2 |
| GO:0009941 | IDA | Gene Ontology | chloroplast envelope | 3 |
| GO:0009570 | IDA, HDA | Gene Ontology | chloroplast stroma | 3 6 |
| GO:0009536 | HDA | Gene Ontology | plastid | 7 |
| GO:0009579 | HDA | Gene Ontology | thylakoid | 8 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.1.4.3 | Protein homeostasis.protein quality control.plastidial Hsp70 chaperone system.nucleotide exchange factor (CGE) |