Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06460 Brassica napus
A03p10230 Brassica napus
A04p06110 Brassica napus
A05p15650 Brassica napus
A10p19300 Brassica napus
Aa31LG1G13960 Aethionema arabicum
Aa31LG4G13060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1594 Anthoceros agrestis
Actinidia03128 Actinidia chinensis
Actinidia30245 Actinidia chinensis
Actinidia31829 Actinidia chinensis
Actinidia39634 Actinidia chinensis
Ah.06g187790 Amaranthus hybridus
Ah.09g229170 Amaranthus hybridus
Ah.14g084810 Amaranthus hybridus
AL6G32280 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.5TSI9H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XRWK6U Arachis hypogaea
AT5G20720 Arabidopsis thaliana
ATR0681G200 Amborella trichopoda
Atru.chr7.1747 Acer truncatum
AUR62014288 Chenopodium quinoa
AUR62025283 Chenopodium quinoa
AUR62028287 Chenopodium quinoa
AUR62034147 Chenopodium quinoa
BcaB01g04773 Brassica carinata
BcaB04g17768 Brassica carinata
BcaB05g22817 Brassica carinata
BcaB05g23084 Brassica carinata
BcaB06g26637 Brassica carinata
BcaB07g32957 Brassica carinata
BcaB08g36522 Brassica carinata
BcaC03g13794 Brassica carinata
BcaC04g19463 Brassica carinata
BcaC04g21216 Brassica carinata
BcaC05g27777 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01360 Brassica napus
BolC2t07068H Brassica oleracea
BolC3t13645H Brassica oleracea
BolC9t56269H Brassica oleracea
BolC9t58407H Brassica oleracea
BraA02t05591Z Brassica rapa
BraA03t10332Z Brassica rapa
BraA04t16313Z Brassica rapa
BraA05t20478Z Brassica rapa
BraA10t44007Z Brassica rapa
C03p11740 Brassica napus
C03p62520 Brassica napus
C05p37730 Brassica napus
C09p27660 Brassica napus
C09p34250 Brassica napus
C09p55460 Brassica napus
CAN.G1661.28 Capsicum annuum
CAN.G542.14 Capsicum annuum
CAN.G63.6 Capsicum annuum
CARHR192090 Cardamine hirsuta
Carub.0006s1906 Capsella rubella
Ca_02236_v3 Cicer arietinum L.
Ca_09316_v3 Cicer arietinum L.
Ca_29025_v3 Cicer arietinum L.
CBR_g23279 Chara braunii
CBR_g4057 Chara braunii
Cc06_g12530 Coffea canephora
CDE07G1931 Ceratophyllum demersum
Cfa002958 Carpinus fangiana
Ciclev10009281m.g Citrus clementina
CiPaw.04G141000 Carya illinoinensis
CiPaw.04G141200 Carya illinoinensis
ClCG03G014820 Citrullus lanatus
COL.COLO4_21229 Corchorus olitorius
Cre08.g358562 Chlamydomonas reinhardtii
Cre12.g505850 Chlamydomonas reinhardtii
Cre16.g673729 Chlamydomonas reinhardtii
CsaV3_1G041320 Cucumis sativus L.
CSS0032321 Camellia sinensis var. sinensis
CSS0037155 Camellia sinensis var. sinensis
DCAR_028467 Daucus carota
Dinv25529 Davidia involucrata
Dinv42419 Davidia involucrata
Duzib150G0982 Durio zibethinus
Duzib168G0199 Durio zibethinus
Duzib187G0525 Durio zibethinus
ECA248G0213 Erigeron canadensis
EL10Ac3g05999 Beta vulgaris
EL10Ac4g08750 Beta vulgaris
EL10Ac6g13988 Beta vulgaris
EL10Ac7g17622 Beta vulgaris
EL10Ac8g18897 Beta vulgaris
EL10Ac8g19011 Beta vulgaris
EL10Ac9g20940 Beta vulgaris
Eucgr.C03295 Eucalyptus grandis
FAN19G1751 Fragaria x ananassa
FAN23G0852 Fragaria x ananassa
FAN26G1050 Fragaria x ananassa
FAN26G3337 Fragaria x ananassa
FAN28G0604 Fragaria x ananassa
FAN28G1135 Fragaria x ananassa
FvH4_1g09160 Fragaria vesca
Glyma.09G072100 Glycine max
Glyma.13G112500 Glycine max
Glyma.15G180900 Glycine max
Glyma.17G047200 Glycine max
Gohir.A06G078700 Gossypium hirsutum
Gohir.A07G016300 Gossypium hirsutum
Gohir.A09G207600 Gossypium hirsutum
Gohir.D06G078000 Gossypium hirsutum
Gohir.D07G016100 Gossypium hirsutum
Gorai.001G016900 Gossypium raimondii
Gorai.010G091000 Gossypium raimondii
GSVIVG01008295001 Vitis vinifera
GSVIVG01015036001 Vitis vinifera
HanXRQChr01g0017741 Helianthus annuus
HanXRQChr05g0158481 Helianthus annuus
HanXRQChr11g0343611 Helianthus annuus
Haze_26044 Corylus avellana
Haze_27283 Corylus avellana
Haze_27771 Corylus avellana
Hma1.2p1_0023F.1_g015020 Hydrangea macrophylla
Hma1.2p1_1821F.1_g304250 Hydrangea macrophylla
HPP92_010942 Vanilla planifolia
HPP92_019287 Vanilla planifolia
Hund06821 Selenicereus undatus
Hund08835 Selenicereus undatus
Hund26069 Selenicereus undatus
Lalb_Chr08g0232741 Lupinus albus
Lalb_Chr11g0074101 Lupinus albus
Lalb_Chr12g0200301 Lupinus albus
Lalb_Chr13g0299321 Lupinus albus
Lalb_Chr23g0276281 Lupinus albus
Lj3g0023426 Lotus japonicus
Lj4A917T72 Lonicera japonica
Lj4g0026142 Lotus japonicus
Lj6g0009278 Lotus japonicus
Lj7A689T77 Lonicera japonica
Lsat_1_v5_gn_2_39021 Lactuca sativa
Lsat_1_v5_gn_4_130381 Lactuca sativa
Lsat_1_v5_gn_4_37181 Lactuca sativa
Manes.03G044000 Manihot esculenta
Manes.16G091000 Manihot esculenta
Mapoly0014s0158 Marchantia polymorpha
MBI13_g01702_MAGBIO Magnolia biondii
MBI14_g11885_MAGBIO Magnolia biondii
MBI19_g29882_MAGBIO Magnolia biondii
MCO09G605 Micromonas commoda
MCO12G054 Micromonas commoda
MD02G1096600 Malus domestica
MD15G1221300 Malus domestica
Medtr2g043230 Medicago truncatula
Medtr4g124910 Medicago truncatula
MELO3C015544.2 Cucumis melo
Migut.J00901 Erythranthe guttata
Migut.L01586 Erythranthe guttata
MSTRG.10494 Avicennia marina
MSTRG.26489 Avicennia marina
Nitab4.5_0000073g0370 Nicotiana tabacum
Nitab4.5_0000400g0050 Nicotiana tabacum
Nitab4.5_0001092g0010 Nicotiana tabacum
Nitab4.5_0001565g0040 Nicotiana tabacum
Nitab4.5_0002443g0050 Nicotiana tabacum
Nitab4.5_0009109g0010 Nicotiana tabacum
Nn5g27784 Nelumbo nucifera
Nn6g35664 Nelumbo nucifera
Nn8g38571 Nelumbo nucifera
Nn8g40078 Nelumbo nucifera
Oeu000288.1 Olea europaea
Oeu007425.1 Olea europaea
Os02g0781400 Oryza sativa ssp. japonica
Os06g0196900 Oryza sativa ssp. japonica
Os06g0197550 Oryza sativa ssp. japonica
Os06g0197575 Oryza sativa ssp. japonica
Os09g0438700 Oryza sativa ssp. japonica
Peaxi162Scf00418g00024 Petunia axillaris
Peaxi162Scf00547g00069 Petunia axillaris
Peaxi162Scf00928g00213 Petunia axillaris
PGR031G0495 Punica granatum
PGR044G2255 Punica granatum
PGR102G2557 Punica granatum
PGR142G2580 Punica granatum
PGSC0003DMG400002389 Solanum tuberosum
PGSC0003DMG400002929 Solanum tuberosum
Phvul.003G128900 Phaseolus vulgaris
Phvul.009G224900 Phaseolus vulgaris
Potri.006G138600 Populus trichocarpa
Potri.018G063200 Populus trichocarpa
Pp3c19_4220 Physcomitrium patens
Pp3c19_4270 Physcomitrium patens
Pp3c19_8070 Physcomitrium patens
Pp3c22_7570 Physcomitrium patens
Pp3c22_7600 Physcomitrium patens
PRCOL_00004840 Prasinoderma coloniale
PRCOL_00005756 Prasinoderma coloniale
Prupe.7G194300 Prunus persica
Psat1g135800 Pisum sativum
Psat4g019040 Pisum sativum
PSO017G0036 Papaver somniferum
PSO170G5194 Papaver somniferum
PSO210G2243 Papaver somniferum
PSO339G2245 Papaver somniferum
PSO339G4775 Papaver somniferum
PSO349G0067 Papaver somniferum
PSO513G0033 Papaver somniferum
PSO675G0196 Papaver somniferum
PSO765G0148 Papaver somniferum
PSO824G0064 Papaver somniferum
PSO832G1100 Papaver somniferum
QL01p042164 Quercus lobata
QL03p032436 Quercus lobata
QL11p001997 Quercus lobata
RcHm_v2.0_Chr2g0095561 Rosa chinensis
Rhsim05G0004300 Rhododendron simsii
Rhsim09G0198900 Rhododendron simsii
Sabra06G0108500 Salix brachista
Sabra18G0055000 Salix brachista
SalBow6G2263 Salvia bowleyana
Sc18g0002740 Simmondsia chinensis
Sc20g0001070 Simmondsia chinensis
Sed0011309 Sechium edule
Sed0027630 Sechium edule
SEGI_05038 Sequoiadendron giganteum
SEGI_38857 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09536 Striga asiatica
SGA_v2.0_scaffold296G47568 Striga asiatica
SGA_v2.0_scaffold31G12679 Striga asiatica
SMO111G0101 Selaginella moellendorffii
SMO119G0076 Selaginella moellendorffii
SMO143G0131 Selaginella moellendorffii
Solyc07g042250.3 Solanum lycopersicum
Solyc12g009245.1 Solanum lycopersicum
Solyc12g009250.3 Solanum lycopersicum
Sopen07g021870 Solanum pennellii
Sopen12g004200 Solanum pennellii
Sopen12g004210 Solanum pennellii
Sp6g23760 Schrenkiella parvula
TAR468G0008 Trochodendron aralioides
TAR624G0668 Trochodendron aralioides
THA.LOC104799611 Tarenaya hassleriana
THA.LOC104810987 Tarenaya hassleriana
THA.LOC104815076 Tarenaya hassleriana
Thecc.07G186700 Theobroma cacao
Thecc.08G185400 Theobroma cacao
Thecc.09G072400 Theobroma cacao
Thhalv10014202m.g Eutrema salsugineum
TPR.G12514 Trifolium pratense
TPR.G28502 Trifolium pratense
TWI34G0724 Tripterygium wilfordii
TWI63G0210 Tripterygium wilfordii
TWI63G1422 Tripterygium wilfordii
unitig_21.g21008 Utricularia gibba
unitig_744.g24651 Utricularia gibba
vmacro09828 Vaccinium macrocarpon
vmacro17102 Vaccinium macrocarpon
VMungo1215G1076 Vigna mungo
VMungo1309G0775 Vigna mungo
Zm00001eb100100 Zea mays
Zm00001eb193040 Zea mays
Zm00001eb373960 Zea mays

User provided reference genes

Program Settings