Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01610 Brassica napus
A03p05730 Brassica napus
Aa31LG10G14740 Aethionema arabicum
Aa31LG3G14680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3399 Anthoceros agrestis
Actinidia06883 Actinidia chinensis
Actinidia16305 Actinidia chinensis
Ah.04g161810 Amaranthus hybridus
Ah.07g199980 Amaranthus hybridus
Ah.07g199990 Amaranthus hybridus
AL6G23050 Arabidopsis lyrata
AL6G23540 Arabidopsis lyrata
AL6G23554 Arabidopsis lyrata
Aqoxy1G00248 Aquilegia oxysepala
Aqoxy1G00252 Aquilegia oxysepala
Aqoxy1G00253 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0VG9YA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3A78DL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1942W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TTFN2L Arachis hypogaea
AT5G12950 Arabidopsis thaliana
AT5G12960 Arabidopsis thaliana
ATR0605G155 Amborella trichopoda
ATR0605G243 Amborella trichopoda
ATR0605G277 Amborella trichopoda
ATR0815G005 Amborella trichopoda
Atru.chr3.2573 Acer truncatum
Atru.chr3.2578 Acer truncatum
AUR62000090 Chenopodium quinoa
AUR62019262 Chenopodium quinoa
AUR62029776 Chenopodium quinoa
BcaB01g05386 Brassica carinata
BcaB01g05388 Brassica carinata
BcaC04g19157 Brassica carinata
BcaNung01184 Brassica carinata
BolC2t06527H Brassica oleracea
BolC3t13173H Brassica oleracea
BolC9t59250H Brassica oleracea
BraA02t05140Z Brassica rapa
BraA03t09911Z Brassica rapa
C02p05820 Brassica napus
C03p06680 Brassica napus
C09p64130 Brassica napus
CAN.G31.13 Capsicum annuum
CAN.G575.55 Capsicum annuum
CAN.G575.56 Capsicum annuum
CANSAT54G0212 Cannabis sativa
CANSAT54G0447 Cannabis sativa
CARHR200500 Cardamine hirsuta
Carub.0006s1113 Capsella rubella
Ca_20576_v3 Cicer arietinum L.
CBR_g3815 Chara braunii
Cc01_g04690 Coffea canephora
CDE04G2126 Ceratophyllum demersum
Cfa009727 Carpinus fangiana
Ciclev10004509m.g Citrus clementina
Ciclev10014230m.g Citrus clementina
Ciclev10014240m.g Citrus clementina
Ciclev10017637m.g Citrus clementina
Ciclev10017730m.g Citrus clementina
Ciclev10017960m.g Citrus clementina
Ciclev10018011m.g Citrus clementina
CiPaw.14G121400 Carya illinoinensis
ClCG02G023420 Citrullus lanatus
COL.COLO4_24842 Corchorus olitorius
COL.COLO4_33681 Corchorus olitorius
COL.COLO4_33682 Corchorus olitorius
Cpa.g.sc84.84 Carica papaya
Cpa.g.sc84.86 Carica papaya
Cre03.g163050 Chlamydomonas reinhardtii
Cre03.g163150 Chlamydomonas reinhardtii
CsaV3_4G024090 Cucumis sativus L.
CSS0020949 Camellia sinensis var. sinensis
CSS0046914 Camellia sinensis var. sinensis
CSS0048841 Camellia sinensis var. sinensis
CSS0049476 Camellia sinensis var. sinensis
DCAR_002051 Daucus carota
DCAR_017437 Daucus carota
DCAR_029943 Daucus carota
DCAR_029944 Daucus carota
Dinv08041 Davidia involucrata
Dinv36288 Davidia involucrata
Duzib147G0522 Durio zibethinus
Duzib150G0815 Durio zibethinus
Duzib170G0892 Durio zibethinus
ECA238G1314 Erigeron canadensis
ECA248G1000 Erigeron canadensis
EL10Ac4g10305 Beta vulgaris
EL10Ac5g12201 Beta vulgaris
EL10As14g24090 Beta vulgaris
Eucgr.B03672 Eucalyptus grandis
Eucgr.B03675 Eucalyptus grandis
Eucgr.B03677 Eucalyptus grandis
FAN11G2025 Fragaria x ananassa
FAN16G1961 Fragaria x ananassa
FAN21G1376 Fragaria x ananassa
FAN25G2888 Fragaria x ananassa
FvH4_3g43250 Fragaria vesca
Glyma.11G131600 Glycine max
Glyma.11G131700 Glycine max
Glyma.11G200101 Glycine max
Glyma.12G055800 Glycine max
Glyma.12G055900 Glycine max
Glyma.13G341450 Glycine max
Glyma.15G033000 Glycine max
Gohir.A07G125600 Gossypium hirsutum
Gohir.D07G129800 Gossypium hirsutum
Gorai.001G140300 Gossypium raimondii
GSVIVG01025310001 Vitis vinifera
GSVIVG01025321001 Vitis vinifera
HanXRQChr07g0197321 Helianthus annuus
HanXRQChr10g0291081 Helianthus annuus
HanXRQChr13g0405961 Helianthus annuus
HanXRQChr13g0405981 Helianthus annuus
HanXRQChr13g0405991 Helianthus annuus
HanXRQChr13g0406001 Helianthus annuus
Haze_23080 Corylus avellana
HPP92_020487 Vanilla planifolia
HPP92_020543 Vanilla planifolia
Hund07541 Selenicereus undatus
Lalb_Chr01g0003311 Lupinus albus
Lalb_Chr03g0026271 Lupinus albus
Lalb_Chr19g0138181 Lupinus albus
Lj1A360T39 Lonicera japonica
Lj2A649T45 Lonicera japonica
Lj3g0014305 Lotus japonicus
Lj3g0026413 Lotus japonicus
Lsat_1_v5_gn_1_66380 Lactuca sativa
Manes.06G167200 Manihot esculenta
Manes.06G167300 Manihot esculenta
Mapoly0138s0019 Marchantia polymorpha
MBI01_g05765_MAGBIO Magnolia biondii
MBI01_g05766_MAGBIO Magnolia biondii
MBI01_g10238_MAGBIO Magnolia biondii
MBI04_g13615_MAGBIO Magnolia biondii
MCO07G340 Micromonas commoda
MD03G1023400 Malus domestica
MD11G1028500 Malus domestica
Medtr4g065150 Medicago truncatula
Medtr4g065200 Medicago truncatula
Medtr4g065220 Medicago truncatula
Medtr4g065790 Medicago truncatula
MELO3C014613.2 Cucumis melo
Migut.D00570 Erythranthe guttata
Migut.D00571 Erythranthe guttata
MSTRG.21401 Avicennia marina
MSTRG.21402 Avicennia marina
Nitab4.5_0000175g0020 Nicotiana tabacum
Nitab4.5_0001925g0060 Nicotiana tabacum
Nitab4.5_0002278g0030 Nicotiana tabacum
Nitab4.5_0013627g0020 Nicotiana tabacum
Nn2g15392 Nelumbo nucifera
Nn7g36189 Nelumbo nucifera
Oeu012936.1 Olea europaea
Oeu014067.1 Olea europaea
Oeu055806.1 Olea europaea
Os01g0286500 Oryza sativa ssp. japonica
Os02g0195500 Oryza sativa ssp. japonica
Os06g0612900 Oryza sativa ssp. japonica
Os06g0613000 Oryza sativa ssp. japonica
Peaxi162Scf00062g00113 Petunia axillaris
Peaxi162Scf00075g00214 Petunia axillaris
Peaxi162Scf00839g00019 Petunia axillaris
PGR102G1080 Punica granatum
PGSC0003DMG400015136 Solanum tuberosum
PGSC0003DMG400015137 Solanum tuberosum
PGSC0003DMG400023854 Solanum tuberosum
Phvul.011G057700 Phaseolus vulgaris
Phvul.011G057800 Phaseolus vulgaris
Phvul.L010743 Phaseolus vulgaris
Potri.001G018200 Populus trichocarpa
Potri.003G206000 Populus trichocarpa
Pp3c4_25120 Physcomitrium patens
Prupe.6G022600 Prunus persica
Psat0s1239g0080 Pisum sativum
Psat0s2266g0080 Pisum sativum
Psat0s301g0200 Pisum sativum
Psat0s493g0040 Pisum sativum
Psat0s636g0080 Pisum sativum
Psat4g061400 Pisum sativum
Psat4g061440 Pisum sativum
Psat6g145440 Pisum sativum
Psat7g021240 Pisum sativum
Psat7g021360 Pisum sativum
Psat7g213360 Pisum sativum
Psat7g213400 Pisum sativum
PSO384G2031 Papaver somniferum
QL01p005559 Quercus lobata
QL01p005576 Quercus lobata
QL01p005594 Quercus lobata
QL01p005612 Quercus lobata
QL01p005629 Quercus lobata
RcHm_v2.0_Chr5g0077301 Rosa chinensis
RcHm_v2.0_Chr5g0077311 Rosa chinensis
RcHm_v2.0_Chr6g0257351 Rosa chinensis
Rhsim01G0190200 Rhododendron simsii
Rhsim06G0095700 Rhododendron simsii
Rhsim06G0098200 Rhododendron simsii
Rhsim13G0224400 Rhododendron simsii
Sabra01G0012300 Salix brachista
Sabra01G0012400 Salix brachista
Sabra01G0012600 Salix brachista
Sabra01G0012800 Salix brachista
Sabra03G0152200 Salix brachista
Sabra03G0152500 Salix brachista
SalBow4G0144 Salvia bowleyana
SalBow4G2212 Salvia bowleyana
Sc09g0000530 Simmondsia chinensis
Sed0002857 Sechium edule
Sed0016959 Sechium edule
SEGI_02909 Sequoiadendron giganteum
SEGI_04967 Sequoiadendron giganteum
SEGI_07327 Sequoiadendron giganteum
SEGI_15315 Sequoiadendron giganteum
SEGI_17059 Sequoiadendron giganteum
SEGI_22208 Sequoiadendron giganteum
SEGI_25152 Sequoiadendron giganteum
SEGI_30831 Sequoiadendron giganteum
SEGI_31952 Sequoiadendron giganteum
SGA_v2.0_scaffold247G44839 Striga asiatica
SGA_v2.0_scaffold8G04617 Striga asiatica
SMO119G0409 Selaginella moellendorffii
SMO143G0016 Selaginella moellendorffii
SMO246G0030 Selaginella moellendorffii
Solyc11g061700.2 Solanum lycopersicum
Solyc12g100120.2 Solanum lycopersicum
Sopen11g023540 Solanum pennellii
Sopen12g034750 Solanum pennellii
Sp6g31010 Schrenkiella parvula
TAR362G0359 Trochodendron aralioides
TAR369G0937 Trochodendron aralioides
TAR623G0921 Trochodendron aralioides
TAR633G1819 Trochodendron aralioides
THA.LOC104799093 Tarenaya hassleriana
THA.LOC104804973 Tarenaya hassleriana
THA.LOC104811146 Tarenaya hassleriana
Thecc.01G157700 Theobroma cacao
Thecc.01G157900 Theobroma cacao
Thecc.09G226900 Theobroma cacao
Thhalv10012662m.g Eutrema salsugineum
TPR.G13663 Trifolium pratense
TPR.G13668 Trifolium pratense
TPR.G23118 Trifolium pratense
TPR.G7431 Trifolium pratense
TWI32G0772 Tripterygium wilfordii
TWI60G1085 Tripterygium wilfordii
unitig_0.g186 Utricularia gibba
unitig_26.g10126 Utricularia gibba
vmacro04181 Vaccinium macrocarpon
vmacro04182 Vaccinium macrocarpon
vmacro12714 Vaccinium macrocarpon
VMungo1080G0304 Vigna mungo
VMungo1127G0976 Vigna mungo
VMungo1127G1189 Vigna mungo
Zm00001eb206010 Zea mays
Zm00001eb206020 Zea mays
Zm00001eb388330 Zea mays
Zm00001eb388340 Zea mays

User provided reference genes

Program Settings